RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Rtl3Q6P1Y1 553 aa10.52□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Q8BGA7 448 aa10.52□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Pkn3Q8K045 878 aa10.52□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Spag16Q8K450 639 aa10.52□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Caap1Q8VDY9 356 aa10.52□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Olfr1502Q8VG66 316 aa10.52□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Ptdss1Q99LH2 473 aaKnown RBP10.52□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 S100pbpQ9D5K4 396 aa10.52□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Siglec1Q62230 1695 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Klhdc7aA2APT9 773 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Fam71aB7XG49 585 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Fgf10O35565 209 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Psmc3O88685 442 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Fam131bQ3TY60 332 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Zfp957Q3UT76 567 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Mtnr1aQ61184 353 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 PrkciQ62074 595 aaKnown RBP10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Znf821Q6PD05 413 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Slc9a4Q8BUE1 797 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Mettl3Q8C3P7 580 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Vps11Q91W86 941 aaKnown RBP10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Gimap3Q99MI6 301 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Pin4Q9CWW6 131 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ssu72Q9CY97 194 aaKnown RBP10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Stx11Q9D3G5 287 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tubgcp4Q9D4F8 667 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Sun1Q9D666 913 aaKnown RBP10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tnfaip8l2Q9D8Y7 184 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Abt1Q9QYL7 269 aaKnown RBP10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Coro1cQ9WUM4 474 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Oas1eA0A0J9YV76 386 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tcp10cE9Q046 482 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ets2P15037 468 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 IppP28575 584 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Cdh9P70407 786 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 MyrfQ3UR85 1138 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Armcx5Q3UZB0 606 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Cdc14bQ6PFY9 485 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Olfr412Q7TRW7 312 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Snx30Q8CE50 437 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Iqsec1Q8R0S2 961 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ndufs1Q91VD9 727 aaKnown RBP10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 F11Q91Y47 624 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Rev1Q920Q2 1249 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tmco1Q921L3 188 aaKnown RBP10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Mfsd5Q921Y4 450 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 AadatQ9WVM8 425 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Iqcj-Schip1A0A088MLT8 559 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Gm10801F7C7Q0 168 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Adcy1O88444 1118 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Schip1P0DPB4 484 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 JundP15066 341 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Sstr3P30935 428 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Cyp2f2P33267 491 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 PuraP42669 321 aaKnown RBP10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 YwhaqP68254 245 aaKnown RBP10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Kcnq1P97414 668 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 RasefQ5RI75 627 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Gstt2Q61133 244 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Runx1t1Q61909 577 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Hist2h2acQ64523 129 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Hist2h2aa1Q6GSS7 130 aaKnown RBP10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Mtmr12Q80TA6 747 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tspan18Q80WR1 248 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 HadhaQ8BMS1 763 aaKnown RBP10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Abi3Q8BYZ1 367 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Vmn1r203Q8R273 311 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Pqbp1Q91VJ5 263 aaKnown RBP10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Nipsnap3bQ9CQE1 247 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 OoepQ9CWE6 164 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Lrrc71Q9D3W5 558 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ppil6Q9D6D8 278 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Efcab9Q9DAM2 216 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 XkQ9QXY7 446 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ak1Q9R0Y5 194 aa10.52□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Kctd14A0A0U1RNG7 287 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Mup6A2AV72 179 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Zfp882E9Q4R4 555 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Cyp2j12G3UXT0 502 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Gm8926L7MUE8 181 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 PbsnO08976 174 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Angpt2O35608 496 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Irf6P97431 467 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Entpd7Q3TCT4 606 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Plcl1Q3USB7 1096 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ecm1Q61508 559 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Prrg3Q6PAQ9 231 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Lrrc15Q80X72 579 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 TbcelQ8C5W3 424 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Q8CCC3 530 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ccdc63Q8CDV6 558 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Lpgat1Q91YX5 370 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Map4k3Q99JP0 894 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Q9D4A5 307 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Timm50Q9D880 353 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Serpinb9bQ9DAV6 377 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ndufs3Q9DCT2 263 aaKnown RBP10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ddx21Q9JIK5 851 aaKnown RBP10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Atp6v1g2Q9WTT4 118 aa10.51□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Col1a1P11087 1453 aa10.51□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms