RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Dock1Q8BUR4 1865 aa13.04□□□□□ -0.32
Rnf4-201ENSMUST00000030992 B020011L13RikA0A087WQI7 412 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Gm13276A0A087WR18 182 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Gm15262A0A140LIQ5 728 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Ifi206G3UZV2 921 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 P01652 108 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 PenkP22005 268 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 PuraP42669 321 aaKnown RBP13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Stx2Q00262 289 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 XiapQ60989 496 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Gstt1Q64471 240 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Stx3Q64704 289 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 4933402J07RikQ8BHX0 270 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Cgrrf1Q8BMJ7 332 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Arhgap24Q8C4V1 747 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Rmnd1Q8CI78 450 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Zbtb6Q8K088 423 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Dhx36Q8VHK9 1001 aaKnown RBP13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Glra3Q91XP5 464 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Tbc1d20Q9D9I4 402 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Tubb3Q9ERD7 450 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Raph1F2Z3U3 1266 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Gm7942L7N277 499 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Gm3187M0QWW3 260 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Ap2a1P17426 977 aaKnown RBP13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Ap2a2P17427 938 aaKnown RBP13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 CblP22682 913 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Il1rapl1P59823 695 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 PrkcqQ02111 707 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Eml1Q05BC3 814 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Meaf6Q2VPQ9 191 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Slc20a1Q61609 681 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Ankrd6Q69ZU8 712 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Arhgap11aQ80Y19 987 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Zfp617Q91WM0 559 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Kdm8Q9CXT6 414 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Serpine3E9Q6A2 401 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Gm5689F6Y2A6 97 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Gm3336J3QMQ6 198 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Slc1a6O35544 561 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Cyp2b10P12791 500 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Atp5bP56480 529 aaKnown RBP13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Itga11P61622 1188 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Serpina5P70458 405 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Gsdmc2Q2KHK6 480 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 PigaQ64323 485 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Cyp2c29Q64458 490 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Hmgb4Q6P8W9 181 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Gsdmc3Q8CB12 480 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Pcdhb2Q91Y00 799 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 DdoQ922Z0 341 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 PigxQ99LV7 254 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Fam227bQ9D518 532 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Tle6Q9WVB3 581 aa13.03□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Znf106O88466 1888 aa13.02□□□□□ -0.32
Rnf4-201ENSMUST00000030992 Arhgef26D3YYY8 869 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Olfr600E9PUN7 314 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Zfp358E9Q8M1 571 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Tekt5G5E8A8 557 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Kpna6O35345 536 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 C1qbpO35658 278 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Hrh2P97292 397 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Atp9bP98195 1146 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Krt26Q3TRJ4 462 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Dnajc6Q80TZ3 938 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Tubgcp5Q8BKN5 1024 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Fra10ac1Q8BP78 315 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Iqsec1Q8R0S2 961 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Unc93b1Q8VCW4 598 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 MiosQ8VE19 875 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Dtnbp1Q91WZ8 352 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 FcrlaQ920A9 352 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Ptdss1Q99LH2 473 aaKnown RBP13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Them5Q9CQJ0 248 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Gins2Q9D600 185 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 HemgnQ9ERZ0 503 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 PolhQ9JJN0 694 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Nme3Q9WV85 169 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Igkv10-96A0A140T8M1 115 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Cyp2b13A6H6J2 491 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Ccdc144bE9PVZ3 520 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 P01670 111 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 P01671 111 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 P01672 111 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Slc2a7P0C6A1 513 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Tubgcp3P58854 905 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Psmb4P99026 264 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Gm8773Q3UQ24 132 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Marveld2Q3UZP0 555 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Kctd8Q50H33 476 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Trcg1Q58Y74 825 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Psd2Q6P1I6 770 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 RfflQ6ZQM0 377 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Olfr1046Q7TR79 316 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Stkld1Q80YS9 662 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Tmtc3Q8BRH0 920 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Csnk1g1Q8BTH8 459 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 Myoz3Q8R4E4 245 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 ChiaQ91XA9 473 aa13.02□□□□□ -0.33
Rnf4-201ENSMUST00000030992 DeraQ91YP3 318 aa13.02□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms