RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Lyve1Q8BHC0 318 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Rsl1d1Q8BVY0 452 aaKnown RBP12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Agbl2Q8CDK2 862 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Irak3Q8K4B2 609 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Vmn1r199Q8R280 367 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Alg9Q8VDI9 611 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Trpv6Q91WD2 767 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Trps1Q925H1 1281 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Slc39a3Q99K24 317 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 MmadhcQ99LS1 296 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Arpc2Q9CVB6 300 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Srfbp1Q9CZ91 441 aaKnown RBP12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Fam227bQ9D518 532 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Mrpl17Q9D8P4 176 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Ccdc70Q9D9B0 223 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Mrpl4Q9DCU6 294 aaKnown RBP12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Magel2Q9QZ04 1284 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 H2afyQ9QZQ8 372 aaKnown RBP12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 PignQ9R1S3 931 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 AadatQ9WVM8 425 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Mtm1Q9Z2C5 603 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Btbd35f16A0A087WSN2 498 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Ifit3bE9PV48 403 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 DcxO88809 366 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Mt-CybP00158 381 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Prox1P48437 737 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Mxi1P50540 228 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Psmc1P62192 440 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Coq10bQ3THF9 240 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 9130409I23RikQ3TS87 320 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Mrgprx2Q3UG50 352 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Pdap1Q3UHX2 181 aaKnown RBP12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Hipk4Q3V016 616 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Acvrl1Q61288 502 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 CcnhQ61458 323 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 CochQ62507 552 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Zfp759Q7M6X3 721 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Tcaf1Q8BNE1 924 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Sfrp1Q8C4U3 314 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Ccdc63Q8CDV6 558 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Taco1Q8K0Z7 294 aaKnown RBP12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Rprd1aQ8VDS4 312 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Slc5a9Q8VDT1 685 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Adcy4Q91WF3 1077 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Pcdhb18Q91Y02 792 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Polr3fQ921X6 316 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Dhrs7bQ99J47 323 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Med7Q9CZB6 233 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 1700016D06RikQ9DAA5 166 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Rhox9Q9EQM5 227 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Kat2bQ9JHD1 813 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 RalbQ9JIW9 206 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Rnf11Q9QYK7 154 aa12.36□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Gm43518A0A0G2JGB6 165 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Gm8257E9Q8R3 264 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Gm10801F7C7Q0 168 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Pabpc4lG5E8X2 370 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 FaahO08914 579 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 P01734 135 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Krt13P08730 437 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Gnao1P18872 354 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 CblP22682 913 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Crabp2P22935 138 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Ckmt1P30275 418 aaKnown RBP12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 PrkacbP68181 351 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Traf6P70196 530 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Larp7Q05CL8 570 aaKnown RBP12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Ak8Q32M07 479 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Q32M26 199 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 DtlQ3TLR7 729 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Cog7Q3UM29 770 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Otol1Q4ZJM7 482 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 ScinQ60604 715 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Olfr1037Q7TR84 321 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 ItchQ8C863 864 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Tmem82Q8R115 356 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Ddx1Q91VR5 740 aaKnown RBP12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 HnrnpabQ99020 285 aaKnown RBP12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Map4k3Q99JP0 894 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 ProzQ9CQW3 399 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 GrapQ9CX99 217 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Tmem53Q9D0Z3 276 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Tjp3Q9QXY1 905 aa12.35□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Adgra2Q91ZV8 1336 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Svs3aF2Z472 265 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Axin2O88566 840 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Thumpd3P97770 505 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Lypla1P97823 230 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 NfibP97863 570 aaKnown RBP12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Casp7P97864 303 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Pi4k2aQ2TBE6 479 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Pdss1Q33DR2 409 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Faf2Q3TDN2 445 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Nol9Q3TZX8 714 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Q3UK37 420 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Pcdhga7Q6DD96 935 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Slc9c1Q6UJY2 1175 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Wdr91Q7TMQ7 748 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Znf12Q7TSI0 686 aa12.34□□□□□ -0.43
Ufd1-201ENSMUST00000005394 Tspan18Q80WR1 248 aa12.34□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 82.7 ms