RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 PDZD8Q8NEN9 1154 aa9.78□□□□□ -0.84
PHGDH-228ENST00000641847 ZSCAN18Q8TBC5 510 aaPredicted RBP9.78□□□□□ -0.84
PHGDH-228ENST00000641847 OVCA2Q8WZ82 227 aa9.78□□□□□ -0.84
PHGDH-228ENST00000641847 EDEM1Q92611 657 aa9.78□□□□□ -0.84
PHGDH-228ENST00000641847 CALR3Q96L12 384 aaKnown RBP9.78□□□□□ -0.84
PHGDH-228ENST00000641847 MYRFLQ96LU7 910 aa9.78□□□□□ -0.84
PHGDH-228ENST00000641847 SLITRK1Q96PX8 696 aa9.78□□□□□ -0.84
PHGDH-228ENST00000641847 IRX2Q9BZI1 471 aaPredicted RBP9.78□□□□□ -0.84
PHGDH-228ENST00000641847 GOLPH3Q9H4A6 298 aa9.78□□□□□ -0.84
PHGDH-228ENST00000641847 TRPV4Q9HBA0 871 aa9.78□□□□□ -0.84
PHGDH-228ENST00000641847 POPDC2Q9HBU9 364 aa9.78□□□□□ -0.84
PHGDH-228ENST00000641847 ASAH2Q9NR71 780 aa9.78□□□□□ -0.84
PHGDH-228ENST00000641847 TLR8Q9NR97 1041 aaKnown RBP9.78□□□□□ -0.84
PHGDH-228ENST00000641847 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.78□□□□□ -0.84
PHGDH-228ENST00000641847 UXTQ9UBK9 157 aaPredicted RBP9.78□□□□□ -0.84
PHGDH-228ENST00000641847 IP6K2Q9UHH9 426 aa9.78□□□□□ -0.84
PHGDH-228ENST00000641847 LCMT1Q9UIC8 334 aa9.78□□□□□ -0.84
PHGDH-228ENST00000641847 MSRB2Q9Y3D2 182 aa9.78□□□□□ -0.84
PHGDH-228ENST00000641847 HEPACAM2A8MVW5 462 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 ESPNB1AK53 854 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 H0Y626 953 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 MYO1FO00160 1098 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 TADA3O75528 432 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 TRIM16O95361 564 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 FYNP06241 537 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 ZDHHC11BP0C7U3 371 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 NCAM1P13591 858 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 PDGFRAP16234 1089 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 SDC4P31431 198 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 CTHP32929 405 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 NOS2P35228 1153 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 MATKP42679 507 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 SULT1E1P49888 294 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 ZNF143P52747 638 aaPredicted RBP9.77□□□□□ -0.85
PHGDH-228ENST00000641847 CDO1Q16878 200 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 CCDC14Q49A88 953 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 DCAF6Q58WW2 860 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 BTBD8Q5XKL5 378 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 TCEAL6Q6IPX3 200 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 DAAM2Q86T65 1068 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 PDZD3Q86UT5 571 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 CPNE8Q86YQ8 564 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 CAMKK1Q8N5S9 505 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 LRRC57Q8N9N7 239 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 TRIM58Q8NG06 486 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 FNIP1Q8TF40 1166 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 TCEAL3Q969E4 200 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 EXOC4Q96A65 974 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 TCEAL4Q96EI5 215 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 C16orf45Q96MC5 204 aaPredicted RBP9.77□□□□□ -0.85
PHGDH-228ENST00000641847 CFAP57Q96MR6 1250 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 GCNAQ96QF7 691 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 CNPY3Q9BT09 278 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 FAM204AQ9H8W3 233 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 NMUR1Q9HB89 426 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 ABCC13Q9NSE7 274 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 OSER1Q9NX31 292 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 TRPM5Q9NZQ8 1165 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 STAP1Q9ULZ2 295 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 NAALADL1Q9UQQ1 740 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 HYOU1Q9Y4L1 999 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 DOCK6Q96HP0 2047 aa9.77□□□□□ -0.85
PHGDH-228ENST00000641847 LNP1A1A4G5 178 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 ZNF840PA6NDX5 716 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 SPOPO43791 374 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 FTCDO95954 541 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 RALAP11233 206 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 MYL4P12829 197 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 RARGP13631 454 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 DESP17661 470 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 TFE3P19532 575 aaPredicted RBP9.76□□□□□ -0.85
PHGDH-228ENST00000641847 GABRR2P28476 465 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 CDC25CP30307 473 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 PTPN9P43378 593 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 PXNP49023 591 aaPredicted RBP9.76□□□□□ -0.85
PHGDH-228ENST00000641847 PSEN1P49768 467 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 GNG11P61952 73 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 PITX1P78337 314 aaPredicted RBP9.76□□□□□ -0.85
PHGDH-228ENST00000641847 ATP11AP98196 1134 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 AMPD2Q01433 879 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 GRSF1Q12849 480 aaKnown RBP eCLIP9.76□□□□□ -0.85
PHGDH-228ENST00000641847 CCINQ13939 588 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 PIGHQ14442 188 aaPredicted RBP9.76□□□□□ -0.85
PHGDH-228ENST00000641847 PON2Q15165 354 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 C15orf59Q2T9L4 293 aaPredicted RBP9.76□□□□□ -0.85
PHGDH-228ENST00000641847 UAP1L1Q3KQV9 507 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 PLK5Q496M5 336 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 SOWAHCQ53LP3 525 aaPredicted RBP9.76□□□□□ -0.85
PHGDH-228ENST00000641847 ZNF569Q5MCW4 686 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 OTUD1Q5VV17 481 aaPredicted RBP9.76□□□□□ -0.85
PHGDH-228ENST00000641847 SYPL2Q5VXT5 272 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 KIAA1211LQ6NV74 962 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 NYAP1Q6ZVC0 841 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 RSRC2Q7L4I2 434 aaKnown RBP9.76□□□□□ -0.85
PHGDH-228ENST00000641847 BEND5Q7L4P6 421 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 TAC4Q86UU9 113 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 HS6ST3Q8IZP7 471 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 SYCE1Q8N0S2 351 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 SLC35F6Q8N357 371 aa9.76□□□□□ -0.85
PHGDH-228ENST00000641847 NIPA2Q8N8Q9 360 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms