RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 FAM171BQ6P995 826 aa22.14■■□□□ 1.13
CLN6-224ENST00000638076 CD300LGQ6UXG3 332 aa22.14■■□□□ 1.13
CLN6-224ENST00000638076 PTPRN2Q92932 1015 aa22.14■■□□□ 1.13
CLN6-224ENST00000638076 SRPK1Q96SB4 655 aaKnown RBP22.14■■□□□ 1.13
CLN6-224ENST00000638076 RRN3Q9NYV6 651 aa22.14■■□□□ 1.13
CLN6-224ENST00000638076 SDR42E2A6NKP2 422 aa22.13■■□□□ 1.13
CLN6-224ENST00000638076 KCNK1O00180 336 aa22.13■■□□□ 1.13
CLN6-224ENST00000638076 KRT38O76015 456 aa22.13■■□□□ 1.13
CLN6-224ENST00000638076 SESN2P58004 480 aaPredicted RBP22.13■■□□□ 1.13
CLN6-224ENST00000638076 CDHR3Q6ZTQ4 885 aa22.13■■□□□ 1.13
CLN6-224ENST00000638076 PDZD4Q76G19 769 aaPredicted RBP22.13■■□□□ 1.13
CLN6-224ENST00000638076 TBC1D1Q86TI0 1168 aaPredicted RBP22.13■■□□□ 1.13
CLN6-224ENST00000638076 KLHDC9Q8NEP7 349 aa22.13■■□□□ 1.13
CLN6-224ENST00000638076 C10orf82Q8WW14 230 aa22.13■■□□□ 1.13
CLN6-224ENST00000638076 TTC17Q96AE7 1141 aa22.13■■□□□ 1.13
CLN6-224ENST00000638076 OXNAD1Q96HP4 312 aaPredicted RBP22.13■■□□□ 1.13
CLN6-224ENST00000638076 IQCGQ9H095 443 aaKnown RBP22.13■■□□□ 1.13
CLN6-224ENST00000638076 TMLHEQ9NVH6 421 aa22.13■■□□□ 1.13
CLN6-224ENST00000638076 MOCS1Q9NZB8 636 aa22.13■■□□□ 1.13
CLN6-224ENST00000638076 MYO18AQ92614 2054 aaKnown RBP22.13■■□□□ 1.13
CLN6-224ENST00000638076 CYP11A1P05108 521 aa22.13■■□□□ 1.13
CLN6-224ENST00000638076 GRIK3Q13003 919 aa22.13■■□□□ 1.13
CLN6-224ENST00000638076 BSPRYQ5W0U4 402 aa22.13■■□□□ 1.13
CLN6-224ENST00000638076 PID1Q7Z2X4 250 aa22.13■■□□□ 1.13
CLN6-224ENST00000638076 DEPDC1BQ8WUY9 529 aa22.13■■□□□ 1.13
CLN6-224ENST00000638076 TMEM209Q96SK2 561 aa22.13■■□□□ 1.13
CLN6-224ENST00000638076 WDCPQ9H6R7 721 aa22.13■■□□□ 1.13
CLN6-224ENST00000638076 TRMT13Q9NUP7 481 aaKnown RBP22.13■■□□□ 1.13
CLN6-224ENST00000638076 RFPL1O75677 317 aa22.12■■□□□ 1.13
CLN6-224ENST00000638076 F9P00740 461 aa22.12■■□□□ 1.13
CLN6-224ENST00000638076 HCAR3P49019 387 aa22.12■■□□□ 1.13
CLN6-224ENST00000638076 IFRD2Q12894 506 aaPredicted RBP22.12■■□□□ 1.13
CLN6-224ENST00000638076 TUSC3Q13454 348 aa22.12■■□□□ 1.13
CLN6-224ENST00000638076 FYB2Q5VWT5 728 aa22.12■■□□□ 1.13
CLN6-224ENST00000638076 CCSAPQ6IQ19 270 aaPredicted RBP22.12■■□□□ 1.13
CLN6-224ENST00000638076 CHSY1Q86X52 802 aa22.12■■□□□ 1.13
CLN6-224ENST00000638076 PGBD4Q96DM1 585 aa22.12■■□□□ 1.13
CLN6-224ENST00000638076 TKTL2Q9H0I9 626 aa22.12■■□□□ 1.13
CLN6-224ENST00000638076 ABT1Q9ULW3 272 aaKnown RBP22.12■■□□□ 1.13
CLN6-224ENST00000638076 BRCA2P51587 3418 aa22.12■■□□□ 1.13
CLN6-224ENST00000638076 CFAP73A6NFT4 308 aa22.12■■□□□ 1.13
CLN6-224ENST00000638076 MGAT1P26572 445 aa22.12■■□□□ 1.13
CLN6-224ENST00000638076 SETDB1Q15047 1291 aa22.12■■□□□ 1.13
CLN6-224ENST00000638076 STEAP4Q687X5 459 aa22.12■■□□□ 1.13
CLN6-224ENST00000638076 UNC5BQ8IZJ1 945 aa22.12■■□□□ 1.13
CLN6-224ENST00000638076 NPWQ8N729 165 aa22.12■■□□□ 1.13
CLN6-224ENST00000638076 OR10T2Q8NGX3 314 aa22.12■■□□□ 1.13
CLN6-224ENST00000638076 MTBPQ96DY7 904 aa22.12■■□□□ 1.13
CLN6-224ENST00000638076 MYLK2Q9H1R3 596 aa22.12■■□□□ 1.13
CLN6-224ENST00000638076 NPHS2Q9NP85 383 aa22.12■■□□□ 1.13
CLN6-224ENST00000638076 IGSF9Q9P2J2 1179 aa22.12■■□□□ 1.13
CLN6-224ENST00000638076 NOD1Q9Y239 953 aa22.12■■□□□ 1.13
CLN6-224ENST00000638076 CHKBQ9Y259 395 aa22.12■■□□□ 1.13
CLN6-224ENST00000638076 SNX10Q9Y5X0 201 aa22.12■■□□□ 1.13
CLN6-224ENST00000638076 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.11■■□□□ 1.13
CLN6-224ENST00000638076 M0QZQ0 153 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 PRKAR2AP13861 404 aaKnown RBP22.11■■□□□ 1.13
CLN6-224ENST00000638076 YY1P25490 414 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 ALDH3A1P30838 453 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 CXCR3P49682 368 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 ELF3P78545 371 aaPredicted RBP22.11■■□□□ 1.13
CLN6-224ENST00000638076 MROH9Q5TGP6 573 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 PM20D1Q6GTS8 502 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 CYS1Q717R9 158 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 LRRTM3Q86VH5 581 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 IRGQQ8WZA9 623 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 APBB2Q92870 758 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 ERP27Q96DN0 273 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 DMAP1Q9NPF5 467 aaPredicted RBP22.11■■□□□ 1.13
CLN6-224ENST00000638076 KLHL8Q9P2G9 620 aaPredicted RBP22.11■■□□□ 1.13
CLN6-224ENST00000638076 OR12D3Q9UGF7 316 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 DSEQ9UL01 958 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 HMX2A2RU54 273 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 ITGB1P05556 798 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 NEFHP12036 1026 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 PTPN3P26045 913 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 CAP1Q01518 475 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 OVGP1Q12889 678 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 OVOS1Q6IE37 1185 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 PARP9Q8IXQ6 854 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 ARNTL2Q8WYA1 636 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 RSPH1Q8WYR4 309 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 LRRC37BQ96QE4 947 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 PKMYT1Q99640 499 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 SLC13A1Q9BZW2 595 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 TMEM51Q9NW97 253 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 RAD54BQ9Y620 910 aa22.11■■□□□ 1.13
CLN6-224ENST00000638076 ALDH1A2O94788 518 aa22.1■■□□□ 1.13
CLN6-224ENST00000638076 ELNP15502 786 aa22.1■■□□□ 1.13
CLN6-224ENST00000638076 BGNP21810 368 aa22.1■■□□□ 1.13
CLN6-224ENST00000638076 CCNFP41002 786 aa22.1■■□□□ 1.13
CLN6-224ENST00000638076 TAC4Q86UU9 113 aa22.1■■□□□ 1.13
CLN6-224ENST00000638076 TSSK1BQ9BXA7 367 aa22.1■■□□□ 1.13
CLN6-224ENST00000638076 PLLPQ9Y342 182 aa22.1■■□□□ 1.13
CLN6-224ENST00000638076 F8W810 466 aa22.09■■□□□ 1.13
CLN6-224ENST00000638076 TROVE2P10155 538 aaKnown RBP eCLIP22.09■■□□□ 1.13
CLN6-224ENST00000638076 SERPINB4P48594 390 aa22.09■■□□□ 1.13
CLN6-224ENST00000638076 SERPINB9P50453 376 aa22.09■■□□□ 1.13
CLN6-224ENST00000638076 KCNJ2P63252 427 aa22.09■■□□□ 1.13
CLN6-224ENST00000638076 PPIDQ08752 370 aaKnown RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms