RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 OTUD1Q5VV17 481 aaPredicted RBP18.38■□□□□ 0.53
PNKP-230ENST00000638016 LYSMD4Q5XG99 296 aa18.38■□□□□ 0.53
PNKP-230ENST00000638016 MBLAC2Q68D91 279 aa18.38■□□□□ 0.53
PNKP-230ENST00000638016 BEND5Q7L4P6 421 aa18.38■□□□□ 0.53
PNKP-230ENST00000638016 KIAA0907Q7Z7F0 614 aaPredicted RBP18.38■□□□□ 0.53
PNKP-230ENST00000638016 NOP9Q86U38 636 aaKnown RBP18.38■□□□□ 0.53
PNKP-230ENST00000638016 MFN1Q8IWA4 741 aa18.38■□□□□ 0.53
PNKP-230ENST00000638016 LGI2Q8N0V4 545 aa18.38■□□□□ 0.53
PNKP-230ENST00000638016 CARNMT1Q8N4J0 409 aa18.38■□□□□ 0.53
PNKP-230ENST00000638016 FAM204AQ9H8W3 233 aa18.38■□□□□ 0.53
PNKP-230ENST00000638016 INTS6Q9UL03 887 aaKnown RBP18.38■□□□□ 0.53
PNKP-230ENST00000638016 ASCC3Q8N3C0 2202 aaKnown RBP18.37■□□□□ 0.53
PNKP-230ENST00000638016 F8VZ95 297 aa18.37■□□□□ 0.53
PNKP-230ENST00000638016 TACR2P21452 398 aa18.37■□□□□ 0.53
PNKP-230ENST00000638016 SDHBP21912 280 aa18.37■□□□□ 0.53
PNKP-230ENST00000638016 IRAK1P51617 712 aa18.37■□□□□ 0.53
PNKP-230ENST00000638016 ARID5AQ03989 594 aa18.37■□□□□ 0.53
PNKP-230ENST00000638016 CHSY1Q86X52 802 aa18.37■□□□□ 0.53
PNKP-230ENST00000638016 TMPRSS6Q8IU80 811 aa18.37■□□□□ 0.53
PNKP-230ENST00000638016 AHI1Q8N157 1196 aa18.37■□□□□ 0.53
PNKP-230ENST00000638016 HJURPQ8NCD3 748 aaPredicted RBP18.37■□□□□ 0.53
PNKP-230ENST00000638016 WFIKKN2Q8TEU8 576 aa18.37■□□□□ 0.53
PNKP-230ENST00000638016 DDX1Q92499 740 aaKnown RBP18.37■□□□□ 0.53
PNKP-230ENST00000638016 AZIN2Q96A70 460 aa18.37■□□□□ 0.53
PNKP-230ENST00000638016 TMEM245Q9H330 911 aa18.37■□□□□ 0.53
PNKP-230ENST00000638016 PRDM16Q9HAZ2 1276 aa18.37■□□□□ 0.53
PNKP-230ENST00000638016 DDIT4Q9NX09 232 aa18.37■□□□□ 0.53
PNKP-230ENST00000638016 C4orf47A7E2U8 309 aa18.36■□□□□ 0.53
PNKP-230ENST00000638016 SYNCRIPO60506 623 aaKnown RBP18.36■□□□□ 0.53
PNKP-230ENST00000638016 HSF2BPO75031 334 aa18.36■□□□□ 0.53
PNKP-230ENST00000638016 APOEP02649 317 aa18.36■□□□□ 0.53
PNKP-230ENST00000638016 CTSOP43234 321 aaPredicted RBP18.36■□□□□ 0.53
PNKP-230ENST00000638016 LIMK1P53667 647 aa18.36■□□□□ 0.53
PNKP-230ENST00000638016 ZNF33AQ06730 810 aa18.36■□□□□ 0.53
PNKP-230ENST00000638016 BYSLQ13895 437 aaKnown RBP18.36■□□□□ 0.53
PNKP-230ENST00000638016 TRIM61Q5EBN2 209 aa18.36■□□□□ 0.53
PNKP-230ENST00000638016 CT47A1Q5JQC4 288 aaPredicted RBP18.36■□□□□ 0.53
PNKP-230ENST00000638016 PPM1JQ5JR12 505 aa18.36■□□□□ 0.53
PNKP-230ENST00000638016 MPP7Q5T2T1 576 aa18.36■□□□□ 0.53
PNKP-230ENST00000638016 SLC20A1Q8WUM9 679 aa18.36■□□□□ 0.53
PNKP-230ENST00000638016 MYO19Q96H55 970 aa18.36■□□□□ 0.53
PNKP-230ENST00000638016 HSPA12BQ96MM6 686 aa18.36■□□□□ 0.53
PNKP-230ENST00000638016 SYNCQ9H7C4 482 aa18.36■□□□□ 0.53
PNKP-230ENST00000638016 FAM207AQ9NSI2 230 aaPredicted RBP18.36■□□□□ 0.53
PNKP-230ENST00000638016 TMEM63CQ9P1W3 806 aa18.36■□□□□ 0.53
PNKP-230ENST00000638016 USP36Q9P275 1121 aaKnown RBP18.36■□□□□ 0.53
PNKP-230ENST00000638016 TM4SF5O14894 197 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 KHNYNO15037 678 aaKnown RBP18.35■□□□□ 0.53
PNKP-230ENST00000638016 ZBTB24O43167 697 aaPredicted RBP18.35■□□□□ 0.53
PNKP-230ENST00000638016 AP5Z1O43299 807 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 FOXD2O60548 495 aaPredicted RBP18.35■□□□□ 0.53
PNKP-230ENST00000638016 ZNF217O75362 1048 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 DAB1O75553 588 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 GFPT2O94808 682 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 MMEP08473 750 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 MAOBP27338 520 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 CSKP41240 450 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 RNASE9P60153 205 aaKnown RBP18.35■□□□□ 0.53
PNKP-230ENST00000638016 CDK17Q00537 523 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 FOXK2Q01167 660 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 SLC6A3Q01959 620 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 CENPCQ03188 943 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 NME3Q13232 169 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 IL31Q6EBC2 164 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 SASS6Q6UVJ0 657 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 SLC36A4Q6YBV0 504 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 SYT12Q8IV01 421 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 FIBINQ8TAL6 211 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 EPS8L1Q8TE68 723 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 TOE1Q96GM8 510 aaKnown RBP18.35■□□□□ 0.53
PNKP-230ENST00000638016 PRMT1Q99873 361 aaKnown RBP18.35■□□□□ 0.53
PNKP-230ENST00000638016 TRIM62Q9BVG3 475 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 HSD3B7Q9H2F3 369 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 PDCL3Q9H2J4 239 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 NLRC4Q9NPP4 1024 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 ANLNQ9NQW6 1124 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 ASNSD1Q9NWL6 643 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 PILRBQ9UKJ0 227 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 SNX10Q9Y5X0 201 aa18.35■□□□□ 0.53
PNKP-230ENST00000638016 PCDH15Q96QU1 1955 aa18.34■□□□□ 0.53
PNKP-230ENST00000638016 KCNU1A8MYU2 1149 aa18.34■□□□□ 0.53
PNKP-230ENST00000638016 I6L893 689 aaPredicted RBP18.34■□□□□ 0.53
PNKP-230ENST00000638016 CDX4O14627 284 aaPredicted RBP18.34■□□□□ 0.53
PNKP-230ENST00000638016 NPC1O15118 1278 aa18.34■□□□□ 0.53
PNKP-230ENST00000638016 LUC7L3O95232 432 aaKnown RBP18.34■□□□□ 0.53
PNKP-230ENST00000638016 DLDP09622 509 aaKnown RBP18.34■□□□□ 0.53
PNKP-230ENST00000638016 CDH5P33151 784 aaPredicted RBP18.34■□□□□ 0.53
PNKP-230ENST00000638016 TPMTP51580 245 aa18.34■□□□□ 0.53
PNKP-230ENST00000638016 COPB1P53618 953 aaKnown RBP18.34■□□□□ 0.53
PNKP-230ENST00000638016 POLR2FP61218 127 aaKnown RBP18.34■□□□□ 0.53
PNKP-230ENST00000638016 CDH18Q13634 790 aa18.34■□□□□ 0.53
PNKP-230ENST00000638016 NCAPHQ15003 741 aa18.34■□□□□ 0.53
PNKP-230ENST00000638016 STX1AQ16623 288 aa18.34■□□□□ 0.53
PNKP-230ENST00000638016 EFHC1Q5JVL4 640 aa18.34■□□□□ 0.53
PNKP-230ENST00000638016 TRNP1Q6NT89 227 aa18.34■□□□□ 0.53
PNKP-230ENST00000638016 SLC26A9Q7LBE3 791 aa18.34■□□□□ 0.53
PNKP-230ENST00000638016 FAM124AQ86V42 546 aa18.34■□□□□ 0.53
PNKP-230ENST00000638016 APCDD1Q8J025 514 aa18.34■□□□□ 0.53
PNKP-230ENST00000638016 SIPA1Q96FS4 1042 aa18.34■□□□□ 0.53
PNKP-230ENST00000638016 BTN2A3PQ96KV6 586 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms