RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 GRIA1P42261 906 aa22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 HCAR3P49019 387 aa22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 LBX1P52954 281 aa22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 WASHC5Q12768 1159 aa22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 BZW1Q7L1Q6 419 aaKnown RBP22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 MIB1Q86YT6 1006 aa22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 FCRL2Q96LA5 508 aaPredicted RBP22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 TTC25Q96NG3 672 aa22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 ROPN1BQ9BZX4 212 aaPredicted RBP22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 ROPN1Q9HAT0 212 aaPredicted RBP22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 IL37Q9NZH6 218 aa22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 SLC12A6Q9UHW9 1150 aa22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 A0A087WUV0 522 aaPredicted RBP22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 EXOC1LA0A1B0GW35 172 aa22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 PPP1R12AO14974 1030 aaPredicted RBP22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 TIMP1P01033 207 aa22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 CREB1P16220 341 aa22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 GCAP28676 217 aa22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 WDR5P61964 334 aaKnown RBP22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 ARTNQ5T4W7 220 aa22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 MFSD5Q6N075 450 aa22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 KIAA1841Q6NSI8 718 aa22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 CAND1Q86VP6 1230 aaKnown RBP22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 RNF168Q8IYW5 571 aaPredicted RBP22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 SERPINB11Q96P15 392 aa22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 LTBP2Q14767 1821 aa22.3■■□□□ 1.16
CHRNA7-228ENST00000637519 POC1B-GALNT4F8VUJ3 575 aa22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 AGTP01019 485 aa22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 GLUD2P49448 558 aa22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 IRAK1P51617 712 aa22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 TNFAIP8L3Q5GJ75 292 aa22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 BRMS1LQ5PSV4 323 aa22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 SLC8B1Q6J4K2 584 aa22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 ZNF534Q76KX8 674 aa22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 C14orf80Q86SX3 495 aa22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 ZNF567Q8N184 647 aa22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 AUTS2Q8WXX7 1259 aa22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 ZNF689Q96CS4 500 aaPredicted RBP22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 SELENOSQ9BQE4 189 aa22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 OSBPL2Q9H1P3 480 aa22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 NDFIP2Q9NV92 336 aa22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 PIH1D1Q9NWS0 290 aaKnown RBP22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 ZMYND8Q9ULU4 1186 aaPredicted RBP22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 HS3ST4Q9Y661 456 aa22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 FAM92AA1XBS5 289 aa22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 HMBSP08397 361 aa22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 RAG1P15918 1043 aa22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 OTOP2Q7RTS6 562 aa22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 COLGALT1Q8NBJ5 622 aa22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 CLSTN3Q9BQT9 956 aa22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 TRIM56Q9BRZ2 755 aaKnown RBP22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 RC3H2Q9HBD1 1191 aaKnown RBP22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 MPP6Q9NZW5 540 aa22.29■■□□□ 1.16
CHRNA7-228ENST00000637519 ABHD14A-ACY1A0A1B0GW23 586 aa22.28■■□□□ 1.16
CHRNA7-228ENST00000637519 KCNU1A8MYU2 1149 aa22.28■■□□□ 1.16
CHRNA7-228ENST00000637519 PSMB4P28070 264 aa22.28■■□□□ 1.16
CHRNA7-228ENST00000637519 BTG3Q14201 252 aaPredicted RBP22.28■■□□□ 1.16
CHRNA7-228ENST00000637519 STAT4Q14765 748 aa22.28■■□□□ 1.16
CHRNA7-228ENST00000637519 EMC10Q5UCC4 262 aa22.28■■□□□ 1.16
CHRNA7-228ENST00000637519 PIK3R6Q5UE93 754 aa22.28■■□□□ 1.16
CHRNA7-228ENST00000637519 ARHGAP36Q6ZRI8 547 aa22.28■■□□□ 1.16
CHRNA7-228ENST00000637519 DNAJC5GQ8N7S2 189 aa22.28■■□□□ 1.16
CHRNA7-228ENST00000637519 ATP11CQ8NB49 1132 aa22.28■■□□□ 1.16
CHRNA7-228ENST00000637519 HAPLN3Q96S86 360 aa22.28■■□□□ 1.16
CHRNA7-228ENST00000637519 CCSER2Q9H7U1 834 aa22.28■■□□□ 1.16
CHRNA7-228ENST00000637519 PRDM16Q9HAZ2 1276 aa22.28■■□□□ 1.16
CHRNA7-228ENST00000637519 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.28■■□□□ 1.16
CHRNA7-228ENST00000637519 SLC38A8A6NNN8 435 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 E7EVH7 732 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 SEC24AO95486 1093 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 DNAJB2P25686 324 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 RFC2P35250 354 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 MDH1P40925 334 aaKnown RBP22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 TMED2Q15363 201 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 MSANTD2Q6P1R3 559 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 C3orf62Q6ZUJ4 267 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 EXOC3L1Q86VI1 746 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 SMAPO00193 183 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 RTN3O95197 1032 aaPredicted RBP22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 MAGEA6P43360 314 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 TBX4P57082 545 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 PPP2R5DQ14738 602 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 C10orf120Q5SQS8 335 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 MANEALQ5VSG8 457 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 FAM43BQ6ZT52 329 aaPredicted RBP22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 MPP5Q8N3R9 675 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 ANKLE1Q8NAG6 615 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 FBF1Q8TES7 1133 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 CFAP36Q96G28 342 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 SLC39A13Q96H72 371 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 SPATA17Q96L03 361 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 PHACTR1Q9C0D0 580 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 TLR6Q9Y2C9 796 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 TEX264Q9Y6I9 313 aa22.27■■□□□ 1.16
CHRNA7-228ENST00000637519 DFFAO00273 331 aa22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 TCEA3O75764 348 aa22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 PTPN3P26045 913 aa22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 GARSP41250 739 aaKnown RBP22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 DMTNQ08495 405 aa22.26■■□□□ 1.15
CHRNA7-228ENST00000637519 PPIDQ08752 370 aaKnown RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms