RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 RCOR3Q9P2K3 495 aaPredicted RBP6.98□□□□□ -1.29
UPF3B-205ENST00000636792 ZKSCAN5Q9Y2L8 839 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 PPP2R2CQ9Y2T4 447 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 CDH23Q9H251 3354 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 COL4A2P08572 1712 aa6.98□□□□□ -1.29
UPF3B-205ENST00000636792 LAMA2P24043 3122 aaKnown RBP6.98□□□□□ -1.29
UPF3B-205ENST00000636792 CHD5Q8TDI0 1954 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 CCDC66A2RUB6 948 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 TYW5A2RUC4 315 aaKnown RBP6.97□□□□□ -1.29
UPF3B-205ENST00000636792 C2orf78A6NCI8 922 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 ANHXE9PGG2 379 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 M0QYT0 321 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 KIF2AO00139 706 aaPredicted RBP6.97□□□□□ -1.29
UPF3B-205ENST00000636792 LRCH4O75427 683 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 ZNF189O75820 626 aaPredicted RBP6.97□□□□□ -1.29
UPF3B-205ENST00000636792 KRT7P08729 469 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 MBL2P11226 248 aaPredicted RBP6.97□□□□□ -1.29
UPF3B-205ENST00000636792 LAMP2P13473 410 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 CEBPBP17676 345 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 AMPD1P23109 780 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 SLC11A2P49281 568 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 CXCR3P49682 368 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 MLLT6P55198 1093 aaPredicted RBP6.97□□□□□ -1.29
UPF3B-205ENST00000636792 TBX4P57082 545 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 RPL7AP62424 266 aaKnown RBP6.97□□□□□ -1.29
UPF3B-205ENST00000636792 RBM10P98175 930 aaKnown RBP6.97□□□□□ -1.29
UPF3B-205ENST00000636792 CYP4F8P98187 520 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 FCHO2Q0JRZ9 810 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 CLUL1Q15846 466 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 ZNF77Q15935 545 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 CCDC14Q49A88 953 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 BOLA3Q53S33 107 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 MPP7Q5T2T1 576 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 EP400NLQ6ZTU2 488 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 HFE2Q6ZVN8 426 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 HTR3DQ70Z44 454 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 GET4Q7L5D6 327 aaPredicted RBP6.97□□□□□ -1.29
UPF3B-205ENST00000636792 TAC4Q86UU9 113 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 GOLGA6L1Q8N7Z2 621 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 C12orf76Q8N812 135 aaPredicted RBP6.97□□□□□ -1.29
UPF3B-205ENST00000636792 ARL14EPQ8N8R7 260 aaPredicted RBP6.97□□□□□ -1.29
UPF3B-205ENST00000636792 TPCN2Q8NHX9 752 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 JOSD2Q8TAC2 188 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 ZSCAN18Q8TBC5 510 aaPredicted RBP6.97□□□□□ -1.29
UPF3B-205ENST00000636792 BPIFB1Q8TDL5 484 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 EDARADDQ8WWZ3 215 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 EXOC4Q96A65 974 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 ARHGEF26Q96DR7 871 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 C1orf74Q96LT6 269 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 CFAP57Q96MR6 1250 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 HAPLN3Q96S86 360 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 KRTAP9-2Q9BYQ4 174 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 GRIP2Q9C0E4 1043 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 CCSER2Q9H7U1 834 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 OSGEPQ9NPF4 335 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 TRPV5Q9NQA5 729 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 THG1LQ9NWX6 298 aaKnown RBP6.97□□□□□ -1.29
UPF3B-205ENST00000636792 ARHGEF38Q9NXL2 777 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 DDX56Q9NY93 547 aaKnown RBP6.97□□□□□ -1.29
UPF3B-205ENST00000636792 CHORDC1Q9UHD1 332 aaPredicted RBP6.97□□□□□ -1.29
UPF3B-205ENST00000636792 RASAL2Q9UJF2 1139 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 NAALADL1Q9UQQ1 740 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.97□□□□□ -1.29
UPF3B-205ENST00000636792 SH3BP1Q9Y3L3 701 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 CPQQ9Y646 472 aa6.97□□□□□ -1.29
UPF3B-205ENST00000636792 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.97□□□□□ -1.29
UPF3B-205ENST00000636792 CXorf51AA0A1B0GTR3 108 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 SLC12A8A0AV02 714 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.96□□□□□ -1.3
UPF3B-205ENST00000636792 KCNU1A8MYU2 1149 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 LOC730098B7Z3J9 87 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 H3BQ06 376 aaPredicted RBP6.96□□□□□ -1.3
UPF3B-205ENST00000636792 PRPSAP2O60256 369 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 KIF5CO60282 957 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 STC2O76061 302 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 NFATC1O95644 943 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 ABL1P00519 1130 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 HOXC13P31276 330 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 GBP2P32456 591 aaPredicted RBP6.96□□□□□ -1.3
UPF3B-205ENST00000636792 NOP2P46087 812 aaKnown RBP6.96□□□□□ -1.3
UPF3B-205ENST00000636792 OXCT1P55809 520 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 HDAC4P56524 1084 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 RNASE9P60153 205 aaKnown RBP6.96□□□□□ -1.3
UPF3B-205ENST00000636792 ZNF252P-AS1Q0IIN9 211 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 EFEMP1Q12805 493 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 PDK2Q15119 407 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 PDGFRLQ15198 375 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 E2F5Q15329 346 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 TAF5Q15542 800 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 PREPLQ4J6C6 727 aaPredicted RBP6.96□□□□□ -1.3
UPF3B-205ENST00000636792 C2CD6Q53TS8 623 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 EFHC2Q5JST6 749 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 OTUD1Q5VV17 481 aaPredicted RBP6.96□□□□□ -1.3
UPF3B-205ENST00000636792 SYPL2Q5VXT5 272 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 TXNDC8Q6A555 127 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 TRNP1Q6NT89 227 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 SLFN11Q7Z7L1 901 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 DAAM2Q86T65 1068 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 ARID3BQ8IVW6 561 aaPredicted RBP6.96□□□□□ -1.3
UPF3B-205ENST00000636792 MAP7D3Q8IWC1 876 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms