RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 FIBINQ8TAL6 211 aa19.66■□□□□ 0.74
CLN6-213ENST00000636212 CYB5D2Q8WUJ1 264 aa19.66■□□□□ 0.74
CLN6-213ENST00000636212 SLC39A13Q96H72 371 aa19.66■□□□□ 0.74
CLN6-213ENST00000636212 BTN2A3PQ96KV6 586 aa19.66■□□□□ 0.74
CLN6-213ENST00000636212 MKRN2Q9H000 416 aaKnown RBP19.66■□□□□ 0.74
CLN6-213ENST00000636212 SIX2Q9NPC8 291 aa19.66■□□□□ 0.74
CLN6-213ENST00000636212 TMEM74BQ9NUR3 256 aa19.66■□□□□ 0.74
CLN6-213ENST00000636212 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.66■□□□□ 0.74
CLN6-213ENST00000636212 ASNSD1Q9NWL6 643 aa19.66■□□□□ 0.74
CLN6-213ENST00000636212 SUN2Q9UH99 717 aa19.66■□□□□ 0.74
CLN6-213ENST00000636212 CACNA1AO00555 2505 aa19.66■□□□□ 0.74
CLN6-213ENST00000636212 MEI4A8MW99 385 aa19.65■□□□□ 0.74
CLN6-213ENST00000636212 H0Y626 953 aa19.65■□□□□ 0.74
CLN6-213ENST00000636212 FOXN3O00409 490 aaPredicted RBP19.65■□□□□ 0.74
CLN6-213ENST00000636212 TM4SF5O14894 197 aa19.65■□□□□ 0.74
CLN6-213ENST00000636212 HSF2BPO75031 334 aa19.65■□□□□ 0.74
CLN6-213ENST00000636212 ASLP04424 464 aa19.65■□□□□ 0.74
CLN6-213ENST00000636212 SERPINF2P08697 491 aa19.65■□□□□ 0.74
CLN6-213ENST00000636212 ABCB4P21439 1286 aa19.65■□□□□ 0.74
CLN6-213ENST00000636212 EEF1GP26641 437 aaKnown RBP19.65■□□□□ 0.74
CLN6-213ENST00000636212 MTA1Q13330 715 aa19.65■□□□□ 0.74
CLN6-213ENST00000636212 UAP1L1Q3KQV9 507 aa19.65■□□□□ 0.74
CLN6-213ENST00000636212 MS4A13Q5J8X5 152 aa19.65■□□□□ 0.74
CLN6-213ENST00000636212 PEAR1Q5VY43 1037 aaPredicted RBP19.65■□□□□ 0.74
CLN6-213ENST00000636212 NADSYN1Q6IA69 706 aa19.65■□□□□ 0.74
CLN6-213ENST00000636212 C11orf57Q6ZUT1 292 aaPredicted RBP19.65■□□□□ 0.74
CLN6-213ENST00000636212 ADIPOR2Q86V24 386 aa19.65■□□□□ 0.74
CLN6-213ENST00000636212 CHSY1Q86X52 802 aa19.65■□□□□ 0.74
CLN6-213ENST00000636212 CPXM1Q96SM3 734 aa19.65■□□□□ 0.74
CLN6-213ENST00000636212 NUP58Q9BVL2 599 aa19.65■□□□□ 0.74
CLN6-213ENST00000636212 LMBRD1Q9NUN5 540 aa19.65■□□□□ 0.74
CLN6-213ENST00000636212 USP36Q9P275 1121 aaKnown RBP19.65■□□□□ 0.74
CLN6-213ENST00000636212 F5H5T6 163 aa19.64■□□□□ 0.73
CLN6-213ENST00000636212 KCNK5O95279 499 aa19.64■□□□□ 0.73
CLN6-213ENST00000636212 SYPP08247 313 aa19.64■□□□□ 0.73
CLN6-213ENST00000636212 HLA-EP13747 358 aa19.64■□□□□ 0.73
CLN6-213ENST00000636212 ENGP17813 658 aa19.64■□□□□ 0.73
CLN6-213ENST00000636212 CD70P32970 193 aa19.64■□□□□ 0.73
CLN6-213ENST00000636212 MAPK8P45983 427 aa19.64■□□□□ 0.73
CLN6-213ENST00000636212 TPMTP51580 245 aa19.64■□□□□ 0.73
CLN6-213ENST00000636212 CAMK2GQ13555 558 aaPredicted RBP19.64■□□□□ 0.73
CLN6-213ENST00000636212 ZC3H12AQ5D1E8 599 aaKnown RBP19.64■□□□□ 0.73
CLN6-213ENST00000636212 TCP11X2Q5H9J9 407 aa19.64■□□□□ 0.73
CLN6-213ENST00000636212 MIIPQ5JXC2 388 aa19.64■□□□□ 0.73
CLN6-213ENST00000636212 SLC47A2Q86VL8 602 aa19.64■□□□□ 0.73
CLN6-213ENST00000636212 SLC41A1Q8IVJ1 513 aa19.64■□□□□ 0.73
CLN6-213ENST00000636212 LGI2Q8N0V4 545 aa19.64■□□□□ 0.73
CLN6-213ENST00000636212 DEFB106AQ8N104 65 aa19.64■□□□□ 0.73
CLN6-213ENST00000636212 C1orf131Q8NDD1 294 aaKnown RBP19.64■□□□□ 0.73
CLN6-213ENST00000636212 TOE1Q96GM8 510 aaKnown RBP19.64■□□□□ 0.73
CLN6-213ENST00000636212 ZNF419Q96HQ0 510 aaPredicted RBP19.64■□□□□ 0.73
CLN6-213ENST00000636212 PRICKLE1Q96MT3 831 aaPredicted RBP19.64■□□□□ 0.73
CLN6-213ENST00000636212 NUCKS1Q9H1E3 243 aaKnown RBP19.64■□□□□ 0.73
CLN6-213ENST00000636212 TMEM245Q9H330 911 aa19.64■□□□□ 0.73
CLN6-213ENST00000636212 DDIT4Q9NX09 232 aa19.64■□□□□ 0.73
CLN6-213ENST00000636212 WSB2Q9NYS7 404 aaPredicted RBP19.64■□□□□ 0.73
CLN6-213ENST00000636212 SYNJ2BP-COX16A0A087WUM0 186 aa19.63■□□□□ 0.73
CLN6-213ENST00000636212 KCNU1A8MYU2 1149 aa19.63■□□□□ 0.73
CLN6-213ENST00000636212 LUC7L3O95232 432 aaKnown RBP19.63■□□□□ 0.73
CLN6-213ENST00000636212 TACR2P21452 398 aa19.63■□□□□ 0.73
CLN6-213ENST00000636212 CCR1P32246 355 aa19.63■□□□□ 0.73
CLN6-213ENST00000636212 CLCN1P35523 988 aa19.63■□□□□ 0.73
CLN6-213ENST00000636212 NOVA1P51513 510 aaKnown RBP19.63■□□□□ 0.73
CLN6-213ENST00000636212 COPAP53621 1224 aa19.63■□□□□ 0.73
CLN6-213ENST00000636212 RPS24P62847 133 aaKnown RBP19.63■□□□□ 0.73
CLN6-213ENST00000636212 DRAP1Q14919 205 aaPredicted RBP19.63■□□□□ 0.73
CLN6-213ENST00000636212 RABGAP1LQ5R372 815 aa19.63■□□□□ 0.73
CLN6-213ENST00000636212 RNF219Q5W0B1 726 aaPredicted RBP19.63■□□□□ 0.73
CLN6-213ENST00000636212 RAP1GAP2Q684P5 730 aa19.63■□□□□ 0.73
CLN6-213ENST00000636212 CACUL1Q86Y37 369 aa19.63■□□□□ 0.73
CLN6-213ENST00000636212 ZDHHC17Q8IUH5 632 aa19.63■□□□□ 0.73
CLN6-213ENST00000636212 FAM71AQ8IYT1 594 aa19.63■□□□□ 0.73
CLN6-213ENST00000636212 HDDC3Q8N4P3 179 aa19.63■□□□□ 0.73
CLN6-213ENST00000636212 WDTC1Q8N5D0 677 aa19.63■□□□□ 0.73
CLN6-213ENST00000636212 TMEM35BQ8NCS4 154 aa19.63■□□□□ 0.73
CLN6-213ENST00000636212 MSANTD4Q8NCY6 345 aa19.63■□□□□ 0.73
CLN6-213ENST00000636212 CADM4Q8NFZ8 388 aa19.63■□□□□ 0.73
CLN6-213ENST00000636212 GTPBP2Q9BX10 602 aaKnown RBP19.63■□□□□ 0.73
CLN6-213ENST00000636212 GPR174Q9BXC1 333 aa19.63■□□□□ 0.73
CLN6-213ENST00000636212 SAMSN1Q9NSI8 373 aaKnown RBP19.63■□□□□ 0.73
CLN6-213ENST00000636212 COX16Q9P0S2 106 aa19.63■□□□□ 0.73
CLN6-213ENST00000636212 KIAA1522Q9P206 1035 aaPredicted RBP19.63■□□□□ 0.73
CLN6-213ENST00000636212 NFE2L3Q9Y4A8 694 aa19.63■□□□□ 0.73
CLN6-213ENST00000636212 TNRC6BQ9UPQ9 1833 aaKnown RBP19.62■□□□□ 0.73
CLN6-213ENST00000636212 CDX4O14627 284 aaPredicted RBP19.62■□□□□ 0.73
CLN6-213ENST00000636212 RNASEH1O60930 286 aaKnown RBP19.62■□□□□ 0.73
CLN6-213ENST00000636212 DNTTP04053 509 aa19.62■□□□□ 0.73
CLN6-213ENST00000636212 ZBTB16Q05516 673 aa19.62■□□□□ 0.73
CLN6-213ENST00000636212 SFSWAPQ12872 951 aaKnown RBP19.62■□□□□ 0.73
CLN6-213ENST00000636212 TTC31Q49AM3 519 aaPredicted RBP19.62■□□□□ 0.73
CLN6-213ENST00000636212 KLHDC7AQ5VTJ3 777 aa19.62■□□□□ 0.73
CLN6-213ENST00000636212 TTC39BQ5VTQ0 682 aaPredicted RBP19.62■□□□□ 0.73
CLN6-213ENST00000636212 PSAPL1Q6NUJ1 521 aa19.62■□□□□ 0.73
CLN6-213ENST00000636212 SASS6Q6UVJ0 657 aa19.62■□□□□ 0.73
CLN6-213ENST00000636212 FAM183BPQ6ZVS7 135 aa19.62■□□□□ 0.73
CLN6-213ENST00000636212 CFAP52Q8N1V2 620 aa19.62■□□□□ 0.73
CLN6-213ENST00000636212 ANKRD20A12PQ8NF67 263 aa19.62■□□□□ 0.73
CLN6-213ENST00000636212 ENOX1Q8TC92 643 aaKnown RBP19.62■□□□□ 0.73
CLN6-213ENST00000636212 WFDC5Q8TCV5 224 aa19.62■□□□□ 0.73
CLN6-213ENST00000636212 TTC17Q96AE7 1141 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms