RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 RPL34P49207 117 aaKnown RBP4.68□□□□□ -1.66
SCN1A-210ENST00000635776 OGDHQ02218 1023 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 ADCY1Q08828 1119 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 WASHC5Q12768 1159 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 MPP3Q13368 585 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 KRT72Q14CN4 511 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 C15orf59Q2T9L4 293 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-210ENST00000635776 RABGAP1LQ5R372 815 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 BANPQ8N9N5 519 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 SPPL2BQ8TCT7 592 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 EFHD1Q9BUP0 239 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 NXF3Q9H4D5 531 aaKnown RBP4.68□□□□□ -1.66
SCN1A-210ENST00000635776 TJP2Q9UDY2 1190 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 PCDHB8Q9UN66 801 aa4.68□□□□□ -1.66
SCN1A-210ENST00000635776 DNAJC6O75061 913 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 FKBP6O75344 327 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 CHEK2O96017 543 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 TUFMP49411 452 aaKnown RBP4.67□□□□□ -1.66
SCN1A-210ENST00000635776 SCNN1GP51170 649 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 PPP2R5DQ14738 602 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 MUM1Q2TAK8 710 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 TAB3Q8N5C8 712 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-210ENST00000635776 FAM111AQ96PZ2 611 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 NPY6RQ99463 290 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 TSEN34Q9BSV6 310 aaKnown RBP4.67□□□□□ -1.66
SCN1A-210ENST00000635776 ZMYND8Q9ULU4 1186 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-210ENST00000635776 TMCO1Q9UM00 188 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 MAGED2Q9UNF1 606 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-210ENST00000635776 STK38LQ9Y2H1 464 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 KRT16P08779 473 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 YBEYP58557 167 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-210ENST00000635776 MSLNQ13421 630 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-210ENST00000635776 SH2D4BQ5SQS7 431 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 MON1AQ86VX9 555 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 TTC30AQ86WT1 665 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 PTPRN2Q92932 1015 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 HDAC11Q96DB2 347 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 CERS2Q96G23 380 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 SCYL1Q96KG9 808 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 SLC2A13Q96QE2 648 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 ARHGEF4Q9NR80 690 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 GNEQ9Y223 722 aaKnown RBP4.67□□□□□ -1.66
SCN1A-210ENST00000635776 ACOT9Q9Y305 439 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 FAM237BA0A1B0GVD1 139 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 SLC18A2Q05940 514 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 PRKAA1Q13131 559 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 FAM83EQ2M2I3 478 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 TEX44Q53QW1 395 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 AARS2Q5JTZ9 985 aaKnown RBP4.67□□□□□ -1.66
SCN1A-210ENST00000635776 MORN1Q5T089 497 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 MRNIPQ6NTE8 343 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 MOB2Q70IA6 237 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 ACSF2Q96CM8 615 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-210ENST00000635776 TWNKQ96RR1 684 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 SPATS2LQ9NUQ6 558 aaKnown RBP4.67□□□□□ -1.66
SCN1A-210ENST00000635776 KLK14Q9P0G3 267 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-210ENST00000635776 USP1O94782 785 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 RALBP11234 206 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 AMPD1P23109 780 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 AKAP5P24588 427 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 MAP3K7CLP57077 242 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 AP2B1P63010 937 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 SLC22A9Q8IVM8 553 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 ZBTB9Q96C00 473 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 IFT43Q96FT9 208 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 TRMOQ9BU70 441 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 ILKAPQ9H0C8 392 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-210ENST00000635776 LRMDAQ9H2I8 198 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 NOD2Q9HC29 1040 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 TLR8Q9NR97 1041 aaKnown RBP4.67□□□□□ -1.66
SCN1A-210ENST00000635776 GPATCH2LQ9NWQ4 482 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 OR12D3Q9UGF7 316 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 TAGLN3Q9UI15 199 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 COMMD10Q9Y6G5 202 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 A0A0U1RQF3 1178 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 FAM170AA1A519 330 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 ZSCAN5DPP0CG00 497 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 ERCC2P18074 760 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 SLC11A2P49281 568 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 HIC1Q14526 733 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 ZNF235Q14590 738 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 TRMT5Q32P41 509 aaKnown RBP4.67□□□□□ -1.66
SCN1A-210ENST00000635776 AGAP9Q5VTM2 703 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 SCN4BQ8IWT1 228 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 RIN3Q8TB24 985 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 HAPLN3Q96S86 360 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 PRDM12Q9H4Q4 367 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 TUBGCP4Q9UGJ1 667 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 INPP5FQ9Y2H2 1132 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 TRIM13O60858 407 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 PYGLP06737 847 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 MYL2P10916 166 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 STMN1P16949 149 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 IL1R2P27930 398 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 PPIDQ08752 370 aaKnown RBP4.67□□□□□ -1.66
SCN1A-210ENST00000635776 WSCD1Q658N2 575 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 C16orf89Q6UX73 402 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 RAET1EQ8TD07 263 aa4.67□□□□□ -1.66
SCN1A-210ENST00000635776 P2RY11Q96G91 374 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms