RNA–Protein interactions for RNA: ENST00000635293.1

TP53-228, Transcript of tumor protein p53, humanhuman

TSL 5

Gene TP53, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-228ENST00000635293 COLGALT1Q8NBJ5 622 aa12□□□□□ -0.49
TP53-228ENST00000635293 MCUQ8NE86 351 aa12□□□□□ -0.49
TP53-228ENST00000635293 OVCA2Q8WZ82 227 aa12□□□□□ -0.49
TP53-228ENST00000635293 TRIM43Q96BQ3 446 aaPredicted RBP12□□□□□ -0.49
TP53-228ENST00000635293 TBC1D31Q96DN5 1066 aa12□□□□□ -0.49
TP53-228ENST00000635293 PWWP2AQ96N64 755 aa12□□□□□ -0.49
TP53-228ENST00000635293 CDK5RAP1Q96SZ6 601 aaKnown RBP12□□□□□ -0.49
TP53-228ENST00000635293 CENPHQ9H3R5 247 aa12□□□□□ -0.49
TP53-228ENST00000635293 RAB6BQ9NRW1 208 aa12□□□□□ -0.49
TP53-228ENST00000635293 FNIP2Q9P278 1114 aa12□□□□□ -0.49
TP53-228ENST00000635293 SHROOM3Q8TF72 1996 aa12□□□□□ -0.49
TP53-228ENST00000635293 RGS16O15492 202 aaPredicted RBP12□□□□□ -0.49
TP53-228ENST00000635293 MSI1O43347 362 aaKnown RBP12□□□□□ -0.49
TP53-228ENST00000635293 PAGE1O75459 146 aa12□□□□□ -0.49
TP53-228ENST00000635293 APOEP02649 317 aa12□□□□□ -0.49
TP53-228ENST00000635293 EPHB2P29323 1055 aa12□□□□□ -0.49
TP53-228ENST00000635293 ATP5DP30049 168 aa12□□□□□ -0.49
TP53-228ENST00000635293 PPM1AP35813 382 aa12□□□□□ -0.49
TP53-228ENST00000635293 COG7P83436 770 aa12□□□□□ -0.49
TP53-228ENST00000635293 ZNF33AQ06730 810 aa12□□□□□ -0.49
TP53-228ENST00000635293 PPIDQ08752 370 aaKnown RBP12□□□□□ -0.49
TP53-228ENST00000635293 GALNT2Q10471 571 aa12□□□□□ -0.49
TP53-228ENST00000635293 SEMA5AQ13591 1074 aa12□□□□□ -0.49
TP53-228ENST00000635293 BTG3Q14201 252 aaPredicted RBP12□□□□□ -0.49
TP53-228ENST00000635293 DNAJC21Q5F1R6 531 aaKnown RBP12□□□□□ -0.49
TP53-228ENST00000635293 UBAP2Q5T6F2 1119 aaKnown RBP12□□□□□ -0.49
TP53-228ENST00000635293 ZBED8Q8IZ13 594 aa12□□□□□ -0.49
TP53-228ENST00000635293 ZNF276Q8N554 614 aa12□□□□□ -0.49
TP53-228ENST00000635293 PDZD8Q8NEN9 1154 aa12□□□□□ -0.49
TP53-228ENST00000635293 BCAS4Q8TDM0 211 aa12□□□□□ -0.49
TP53-228ENST00000635293 HDAC11Q96DB2 347 aa12□□□□□ -0.49
TP53-228ENST00000635293 SLC39A13Q96H72 371 aa12□□□□□ -0.49
TP53-228ENST00000635293 C9orf72Q96LT7 481 aa12□□□□□ -0.49
TP53-228ENST00000635293 CRISPLD1Q9H336 500 aa12□□□□□ -0.49
TP53-228ENST00000635293 PRDM12Q9H4Q4 367 aa12□□□□□ -0.49
TP53-228ENST00000635293 CATSPERBQ9H7T0 1116 aa12□□□□□ -0.49
TP53-228ENST00000635293 IL23AQ9NPF7 189 aa12□□□□□ -0.49
TP53-228ENST00000635293 EIF2B3Q9NR50 452 aaKnown RBP12□□□□□ -0.49
TP53-228ENST00000635293 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12□□□□□ -0.49
TP53-228ENST00000635293 OSER1Q9NX31 292 aa12□□□□□ -0.49
TP53-228ENST00000635293 SPG21Q9NZD8 308 aa12□□□□□ -0.49
TP53-228ENST00000635293 NEU3Q9UQ49 428 aa12□□□□□ -0.49
TP53-228ENST00000635293 SLC38A8A6NNN8 435 aa11.99□□□□□ -0.49
TP53-228ENST00000635293 RNF103O00237 685 aa11.99□□□□□ -0.49
TP53-228ENST00000635293 ZDHHC11BP0C7U3 371 aa11.99□□□□□ -0.49
TP53-228ENST00000635293 OR1D2P34982 312 aa11.99□□□□□ -0.49
TP53-228ENST00000635293 PHBP35232 272 aa11.99□□□□□ -0.49
TP53-228ENST00000635293 PGFP49763 221 aa11.99□□□□□ -0.49
TP53-228ENST00000635293 TBX4P57082 545 aa11.99□□□□□ -0.49
TP53-228ENST00000635293 CDK16Q00536 496 aa11.99□□□□□ -0.49
TP53-228ENST00000635293 CREMQ03060 361 aa11.99□□□□□ -0.49
TP53-228ENST00000635293 DUSP4Q13115 394 aa11.99□□□□□ -0.49
TP53-228ENST00000635293 TRIP4Q15650 581 aaPredicted RBP11.99□□□□□ -0.49
TP53-228ENST00000635293 CCDC38Q502W7 563 aa11.99□□□□□ -0.49
TP53-228ENST00000635293 B4GALNT4Q76KP1 1039 aa11.99□□□□□ -0.49
TP53-228ENST00000635293 TADA2BQ86TJ2 420 aa11.99□□□□□ -0.49
TP53-228ENST00000635293 DDX53Q86TM3 631 aaKnown RBP11.99□□□□□ -0.49
TP53-228ENST00000635293 LZTR1Q8N653 840 aa11.99□□□□□ -0.49
TP53-228ENST00000635293 CCDC110Q8TBZ0 833 aa11.99□□□□□ -0.49
TP53-228ENST00000635293 EPS8L3Q8TE67 593 aaKnown RBP11.99□□□□□ -0.49
TP53-228ENST00000635293 FCRL2Q96LA5 508 aaPredicted RBP11.99□□□□□ -0.49
TP53-228ENST00000635293 C1orf74Q96LT6 269 aa11.99□□□□□ -0.49
TP53-228ENST00000635293 UBE2OQ9C0C9 1292 aaKnown RBP11.99□□□□□ -0.49
TP53-228ENST00000635293 FETUBQ9UGM5 382 aa11.99□□□□□ -0.49
TP53-228ENST00000635293 SFMBT1Q9UHJ3 866 aa11.99□□□□□ -0.49
TP53-228ENST00000635293 LGALS13Q9UHV8 139 aa11.99□□□□□ -0.49
TP53-228ENST00000635293 MAFFQ9ULX9 164 aa11.99□□□□□ -0.49
TP53-228ENST00000635293 SLC27A5Q9Y2P5 690 aa11.99□□□□□ -0.49
TP53-228ENST00000635293 RRP15Q9Y3B9 282 aaKnown RBP11.99□□□□□ -0.49
TP53-228ENST00000635293 MRPL42Q9Y6G3 142 aaKnown RBP11.99□□□□□ -0.49
TP53-228ENST00000635293 CENPFP49454 3210 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 DNAH12Q6ZR08 3092 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 SRRM3A6NNA2 597 aaPredicted RBP11.98□□□□□ -0.49
TP53-228ENST00000635293 GOLGA8MH3BSY2 632 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 SPAG6O75602 509 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 URODP06132 367 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 ATP2A2P16615 1042 aaKnown RBP11.98□□□□□ -0.49
TP53-228ENST00000635293 ATF6P18850 670 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 ITGB8P26012 769 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 ATP1A2P50993 1020 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 KPNA1P52294 538 aaPredicted RBP11.98□□□□□ -0.49
TP53-228ENST00000635293 LBX1P52954 281 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 NRLP54845 237 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 RING1Q06587 406 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 AP1B1Q10567 949 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 TAF10Q12962 218 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 TNFAIP8L3Q5GJ75 292 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 ANKRD20A2Q5SQ80 823 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 ANKRD20A1Q5TYW2 823 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 ANKRD20A3Q5VUR7 823 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 NPWQ8N729 165 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 ATP6V0D2Q8N8Y2 350 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 UHMK1Q8TAS1 419 aaKnown RBP11.98□□□□□ -0.49
TP53-228ENST00000635293 PYROXD1Q8WU10 500 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 LRRC39Q96DD0 335 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 P2RY11Q96G91 374 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 VAT1Q99536 393 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 LGMNQ99538 433 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 ETNK1Q9HBU6 452 aa11.98□□□□□ -0.49
TP53-228ENST00000635293 XAB2Q9HCS7 855 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms