RNA–Protein interactions for RNA: ENST00000630016.1

CHD2-219, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-219ENST00000630016 SOS1Q07889 1333 aaPredicted RBP3.96□□□□□ -1.77
CHD2-219ENST00000630016 IGLV5-39A0A0G2JS06 123 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 CYSRT1A8MQ03 144 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 FOXN3O00409 490 aaPredicted RBP3.96□□□□□ -1.78
CHD2-219ENST00000630016 SYF2O95926 243 aaKnown RBP3.96□□□□□ -1.78
CHD2-219ENST00000630016 ALDH2P05091 517 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 IL6STP40189 918 aaPredicted RBP3.96□□□□□ -1.78
CHD2-219ENST00000630016 CPA2P48052 419 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 EIF5P55010 431 aaKnown RBP3.96□□□□□ -1.78
CHD2-219ENST00000630016 YPEL5P62699 121 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 CFHR3Q02985 330 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 STIM1Q13586 685 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 RAB32Q13637 225 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 MFSD13AQ14CX5 517 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 RRS1Q15050 365 aaKnown RBP3.96□□□□□ -1.78
CHD2-219ENST00000630016 PTCHD3Q3KNS1 767 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 KRTAP27-1Q3LI81 207 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 CCDC181Q5TID7 509 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 DCAF12L1Q5VU92 463 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 OR6B3Q8NGW1 331 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 DNAJB14Q8TBM8 379 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 KBTBD7Q8WVZ9 684 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 CTHRC1Q96CG8 243 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 HIC2Q96JB3 615 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 TESK2Q96S53 571 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 ZPBPQ9BS86 351 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 TRIM54Q9BYV2 358 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 ASPSCR1Q9BZE9 553 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 MRPL44Q9H9J2 332 aaKnown RBP3.96□□□□□ -1.78
CHD2-219ENST00000630016 TRIM36Q9NQ86 728 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 CHPF2Q9P2E5 772 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 STAP2Q9UGK3 403 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 PAXBP1Q9Y5B6 917 aa3.96□□□□□ -1.78
CHD2-219ENST00000630016 NRXN2Q9P2S2 1712 aa3.95□□□□□ -1.78
CHD2-219ENST00000630016 DICER1Q9UPY3 1922 aaKnown RBP3.95□□□□□ -1.78
CHD2-219ENST00000630016 CARMIL3Q8ND23 1372 aa3.95□□□□□ -1.78
CHD2-219ENST00000630016 C4orf47A7E2U8 309 aa3.95□□□□□ -1.78
CHD2-219ENST00000630016 SPRY2O43597 315 aa3.95□□□□□ -1.78
CHD2-219ENST00000630016 SRGAP2O75044 1071 aa3.95□□□□□ -1.78
CHD2-219ENST00000630016 NPR1P16066 1061 aa3.95□□□□□ -1.78
CHD2-219ENST00000630016 CAPN2P17655 700 aa3.95□□□□□ -1.78
CHD2-219ENST00000630016 ZXDBP98169 803 aa3.95□□□□□ -1.78
CHD2-219ENST00000630016 CTBP1Q13363 440 aa3.95□□□□□ -1.78
CHD2-219ENST00000630016 ZNF628Q5EBL2 1059 aa3.95□□□□□ -1.78
CHD2-219ENST00000630016 ODR4Q5SWX8 454 aa3.95□□□□□ -1.78
CHD2-219ENST00000630016 SMIM5Q71RC9 77 aa3.95□□□□□ -1.78
CHD2-219ENST00000630016 GRAMD1CQ8IYS0 662 aa3.95□□□□□ -1.78
CHD2-219ENST00000630016 DCP1BQ8IZD4 617 aaKnown RBP3.95□□□□□ -1.78
CHD2-219ENST00000630016 PLBD2Q8NHP8 589 aa3.95□□□□□ -1.78
CHD2-219ENST00000630016 ZNF622Q969S3 477 aaKnown RBP eCLIP3.95□□□□□ -1.782e-31■□□□□ 8.8
CHD2-219ENST00000630016 PPP1R9BQ96SB3 815 aa3.95□□□□□ -1.78
CHD2-219ENST00000630016 NUP88Q99567 741 aaPredicted RBP3.95□□□□□ -1.78
CHD2-219ENST00000630016 TMEM204Q9BSN7 226 aa3.95□□□□□ -1.78
CHD2-219ENST00000630016 SEMA4BQ9NPR2 832 aaPredicted RBP3.95□□□□□ -1.78
CHD2-219ENST00000630016 LUC7L2Q9Y383 392 aaKnown RBP3.95□□□□□ -1.78
CHD2-219ENST00000630016 CDY1Q9Y6F8 540 aa3.95□□□□□ -1.78
CHD2-219ENST00000630016 TRIP12Q14669 1992 aaPredicted RBP3.94□□□□□ -1.78
CHD2-219ENST00000630016 CLIC1O00299 241 aa3.94□□□□□ -1.78
CHD2-219ENST00000630016 BTN3A1O00481 513 aa3.94□□□□□ -1.78
CHD2-219ENST00000630016 INPPL1O15357 1258 aa3.94□□□□□ -1.78
CHD2-219ENST00000630016 TBC1D4O60343 1298 aa3.94□□□□□ -1.78
CHD2-219ENST00000630016 CD63P08962 238 aa3.94□□□□□ -1.78
CHD2-219ENST00000630016 ATF7P17544 494 aaPredicted RBP3.94□□□□□ -1.78
CHD2-219ENST00000630016 TNFRSF1BP20333 461 aa3.94□□□□□ -1.78
CHD2-219ENST00000630016 MMP14P50281 582 aa3.94□□□□□ -1.78
CHD2-219ENST00000630016 TIRAPP58753 221 aa3.94□□□□□ -1.78
CHD2-219ENST00000630016 FKBP1BP68106 108 aa3.94□□□□□ -1.78
CHD2-219ENST00000630016 B4GALNT1Q00973 533 aa3.94□□□□□ -1.78
CHD2-219ENST00000630016 SLC13A2Q13183 592 aa3.94□□□□□ -1.78
CHD2-219ENST00000630016 SLC14A1Q13336 389 aa3.94□□□□□ -1.78
CHD2-219ENST00000630016 PFKFB3Q16875 520 aaPredicted RBP3.94□□□□□ -1.78
CHD2-219ENST00000630016 INSCQ1MX18 579 aa3.94□□□□□ -1.78
CHD2-219ENST00000630016 CACHD1Q5VU97 1274 aa3.94□□□□□ -1.78
CHD2-219ENST00000630016 CST9Q5W186 159 aa3.94□□□□□ -1.78
CHD2-219ENST00000630016 ZBTB46Q86UZ6 589 aa3.94□□□□□ -1.78
CHD2-219ENST00000630016 HPS3Q969F9 1004 aa3.94□□□□□ -1.78
CHD2-219ENST00000630016 C1GALT1C1Q96EU7 318 aa3.94□□□□□ -1.78
CHD2-219ENST00000630016 CAMK1GQ96NX5 476 aa3.94□□□□□ -1.78
CHD2-219ENST00000630016 TMX4Q9H1E5 349 aaPredicted RBP3.94□□□□□ -1.78
CHD2-219ENST00000630016 POLKQ9UBT6 870 aa3.94□□□□□ -1.78
CHD2-219ENST00000630016 COL5A3P25940 1745 aaPredicted RBP3.94□□□□□ -1.78
CHD2-219ENST00000630016 THSD7BQ9C0I4 1608 aa3.94□□□□□ -1.78
CHD2-219ENST00000630016 DLEC1Q9Y238 1755 aa3.94□□□□□ -1.78
CHD2-219ENST00000630016 KIF7Q2M1P5 1343 aa3.94□□□□□ -1.78
CHD2-219ENST00000630016 COL15A1P39059 1388 aa3.93□□□□□ -1.78
CHD2-219ENST00000630016 FER1L6Q2WGJ9 1857 aa3.93□□□□□ -1.78
CHD2-219ENST00000630016 A0A088AWK7 358 aa3.93□□□□□ -1.78
CHD2-219ENST00000630016 A0A1W2PPL8 197 aa3.93□□□□□ -1.78
CHD2-219ENST00000630016 RGS10O43665 173 aa3.93□□□□□ -1.78
CHD2-219ENST00000630016 OFD1O75665 1012 aa3.93□□□□□ -1.78
CHD2-219ENST00000630016 RASAL1O95294 804 aa3.93□□□□□ -1.78
CHD2-219ENST00000630016 UQCRC1P31930 480 aa3.93□□□□□ -1.78
CHD2-219ENST00000630016 ARFIP2P53365 341 aa3.93□□□□□ -1.78
CHD2-219ENST00000630016 TIAL1Q01085 375 aaKnown RBP eCLIP3.93□□□□□ -1.78
CHD2-219ENST00000630016 TNIP1Q15025 636 aa3.93□□□□□ -1.78
CHD2-219ENST00000630016 FAM110CQ1W6H9 321 aa3.93□□□□□ -1.78
CHD2-219ENST00000630016 PRTGQ2VWP7 1150 aa3.93□□□□□ -1.78
CHD2-219ENST00000630016 BRDTQ58F21 947 aaPredicted RBP3.93□□□□□ -1.78
CHD2-219ENST00000630016 MANEAQ5SRI9 462 aa3.93□□□□□ -1.78
CHD2-219ENST00000630016 PRR5LQ6MZQ0 368 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms