RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 PLA2G2AP14555 144 aa20.98■□□□□ 0.95
TARDBP-228ENST00000629725 POLR2EP19388 210 aaKnown RBP20.98■□□□□ 0.95
TARDBP-228ENST00000629725 GCLMP48507 274 aa20.98■□□□□ 0.95
TARDBP-228ENST00000629725 ACADVLP49748 655 aa20.98■□□□□ 0.95
TARDBP-228ENST00000629725 RTP5Q14D33 572 aa20.98■□□□□ 0.95
TARDBP-228ENST00000629725 HES3Q5TGS1 186 aa20.98■□□□□ 0.95
TARDBP-228ENST00000629725 PM20D1Q6GTS8 502 aa20.98■□□□□ 0.95
TARDBP-228ENST00000629725 SAP25Q8TEE9 199 aa20.98■□□□□ 0.95
TARDBP-228ENST00000629725 RSPH9Q9H1X1 276 aaPredicted RBP20.98■□□□□ 0.95
TARDBP-228ENST00000629725 PABPC3Q9H361 631 aaKnown RBP20.98■□□□□ 0.95
TARDBP-228ENST00000629725 FBXL12Q9NXK8 326 aa20.98■□□□□ 0.95
TARDBP-228ENST00000629725 FAM13BQ9NYF5 915 aa20.98■□□□□ 0.95
TARDBP-228ENST00000629725 HBS1LQ9Y450 684 aaKnown RBP20.98■□□□□ 0.95
TARDBP-228ENST00000629725 YKT6O15498 198 aa20.97■□□□□ 0.95
TARDBP-228ENST00000629725 LATS1O95835 1130 aa20.97■□□□□ 0.95
TARDBP-228ENST00000629725 WNT1P04628 370 aa20.97■□□□□ 0.95
TARDBP-228ENST00000629725 SLFN14P0C7P3 912 aa20.97■□□□□ 0.95
TARDBP-228ENST00000629725 CD38P28907 300 aa20.97■□□□□ 0.95
TARDBP-228ENST00000629725 GALCP54803 685 aa20.97■□□□□ 0.95
TARDBP-228ENST00000629725 SHBQ15464 509 aa20.97■□□□□ 0.95
TARDBP-228ENST00000629725 NCEH1Q6PIU2 408 aa20.97■□□□□ 0.95
TARDBP-228ENST00000629725 CEP57L1Q8IYX8 460 aa20.97■□□□□ 0.95
TARDBP-228ENST00000629725 ZNF843Q8N446 348 aa20.97■□□□□ 0.95
TARDBP-228ENST00000629725 EID2Q8N6I1 236 aa20.97■□□□□ 0.95
TARDBP-228ENST00000629725 SNIP1Q8TAD8 396 aaKnown RBP20.97■□□□□ 0.95
TARDBP-228ENST00000629725 RNF139Q8WU17 664 aa20.97■□□□□ 0.95
TARDBP-228ENST00000629725 TMEM176AQ96HP8 235 aa20.97■□□□□ 0.95
TARDBP-228ENST00000629725 INTS4Q96HW7 963 aaKnown RBP20.97■□□□□ 0.95
TARDBP-228ENST00000629725 ULBP1Q9BZM6 244 aa20.97■□□□□ 0.95
TARDBP-228ENST00000629725 EBF2Q9HAK2 575 aa20.97■□□□□ 0.95
TARDBP-228ENST00000629725 AASDHPPTQ9NRN7 309 aa20.97■□□□□ 0.95
TARDBP-228ENST00000629725 SFMBT1Q9UHJ3 866 aa20.97■□□□□ 0.95
TARDBP-228ENST00000629725 MAPK13O15264 365 aa20.96■□□□□ 0.95
TARDBP-228ENST00000629725 CALUO43852 315 aaPredicted RBP20.96■□□□□ 0.95
TARDBP-228ENST00000629725 RNASEH1O60930 286 aaKnown RBP20.96■□□□□ 0.95
TARDBP-228ENST00000629725 TRIM49P0CI25 452 aa20.96■□□□□ 0.95
TARDBP-228ENST00000629725 TRIM49CP0CI26 452 aa20.96■□□□□ 0.95
TARDBP-228ENST00000629725 PDIA4P13667 645 aaKnown RBP20.96■□□□□ 0.95
TARDBP-228ENST00000629725 SGSHP51688 502 aa20.96■□□□□ 0.95
TARDBP-228ENST00000629725 PPP3CAQ08209 521 aa20.96■□□□□ 0.95
TARDBP-228ENST00000629725 SFSWAPQ12872 951 aaKnown RBP20.96■□□□□ 0.95
TARDBP-228ENST00000629725 FBXL19Q6PCT2 694 aa20.96■□□□□ 0.95
TARDBP-228ENST00000629725 INTS8Q75QN2 995 aaKnown RBP20.96■□□□□ 0.95
TARDBP-228ENST00000629725 GPR155Q7Z3F1 870 aa20.96■□□□□ 0.95
TARDBP-228ENST00000629725 ANKRD52Q8NB46 1076 aa20.96■□□□□ 0.95
TARDBP-228ENST00000629725 SLC4A11Q8NBS3 891 aa20.96■□□□□ 0.95
TARDBP-228ENST00000629725 NDRG1Q92597 394 aaKnown RBP20.96■□□□□ 0.95
TARDBP-228ENST00000629725 MTG2Q9H4K7 406 aa20.96■□□□□ 0.95
TARDBP-228ENST00000629725 MMRN2Q9H8L6 949 aa20.96■□□□□ 0.95
TARDBP-228ENST00000629725 GDF3Q9NR23 364 aa20.96■□□□□ 0.95
TARDBP-228ENST00000629725 SERGEFQ9UGK8 458 aa20.96■□□□□ 0.95
TARDBP-228ENST00000629725 TEX51A0A1B0GUA7 166 aa20.95■□□□□ 0.94
TARDBP-228ENST00000629725 LRRC72A6NJI9 287 aa20.95■□□□□ 0.94
TARDBP-228ENST00000629725 CD70P32970 193 aa20.95■□□□□ 0.94
TARDBP-228ENST00000629725 ARRB1P49407 418 aaPredicted RBP20.95■□□□□ 0.94
TARDBP-228ENST00000629725 ST8SIA6P61647 398 aa20.95■□□□□ 0.94
TARDBP-228ENST00000629725 KMT5BQ4FZB7 885 aa20.95■□□□□ 0.94
TARDBP-228ENST00000629725 ARHGAP17Q68EM7 881 aa20.95■□□□□ 0.94
TARDBP-228ENST00000629725 BHLHA9Q7RTU4 235 aa20.95■□□□□ 0.94
TARDBP-228ENST00000629725 TTC39CQ8N584 583 aa20.95■□□□□ 0.94
TARDBP-228ENST00000629725 WFDC5Q8TCV5 224 aa20.95■□□□□ 0.94
TARDBP-228ENST00000629725 TSC1Q92574 1164 aa20.95■□□□□ 0.94
TARDBP-228ENST00000629725 EDEM1Q92611 657 aa20.95■□□□□ 0.94
TARDBP-228ENST00000629725 FGF11Q92914 225 aa20.95■□□□□ 0.94
TARDBP-228ENST00000629725 NEUROG2Q9H2A3 272 aa20.95■□□□□ 0.94
TARDBP-228ENST00000629725 CISHQ9NSE2 258 aa20.95■□□□□ 0.94
TARDBP-228ENST00000629725 FOXD4L1Q9NU39 408 aa20.95■□□□□ 0.94
TARDBP-228ENST00000629725 A0A1W2PP55 124 aa20.94■□□□□ 0.94
TARDBP-228ENST00000629725 MID1O15344 667 aa20.94■□□□□ 0.94
TARDBP-228ENST00000629725 TBL1XO60907 577 aa20.94■□□□□ 0.94
TARDBP-228ENST00000629725 KRT13P13646 458 aa20.94■□□□□ 0.94
TARDBP-228ENST00000629725 EPHA8P29322 1005 aaPredicted RBP20.94■□□□□ 0.94
TARDBP-228ENST00000629725 RAD23BP54727 409 aa20.94■□□□□ 0.94
TARDBP-228ENST00000629725 CST6Q15828 149 aa20.94■□□□□ 0.94
TARDBP-228ENST00000629725 MPP7Q5T2T1 576 aa20.94■□□□□ 0.94
TARDBP-228ENST00000629725 BSPRYQ5W0U4 402 aa20.94■□□□□ 0.94
TARDBP-228ENST00000629725 OR2T34Q8NGX1 318 aa20.94■□□□□ 0.94
TARDBP-228ENST00000629725 MYO19Q96H55 970 aa20.94■□□□□ 0.94
TARDBP-228ENST00000629725 IPO9Q96P70 1041 aaKnown RBP20.94■□□□□ 0.94
TARDBP-228ENST00000629725 OMDQ99983 421 aa20.94■□□□□ 0.94
TARDBP-228ENST00000629725 LRRC4Q9HBW1 653 aa20.94■□□□□ 0.94
TARDBP-228ENST00000629725 TMEM8AQ9HCN3 771 aa20.94■□□□□ 0.94
TARDBP-228ENST00000629725 TRAF3IP3Q9Y228 551 aa20.94■□□□□ 0.94
TARDBP-228ENST00000629725 TULP2O00295 520 aa20.93■□□□□ 0.94
TARDBP-228ENST00000629725 SIN3BO75182 1162 aa20.93■□□□□ 0.94
TARDBP-228ENST00000629725 RNASEH2AO75792 299 aaKnown RBP20.93■□□□□ 0.94
TARDBP-228ENST00000629725 NR2F2P24468 414 aa20.93■□□□□ 0.94
TARDBP-228ENST00000629725 ILKQ13418 452 aa20.93■□□□□ 0.94
TARDBP-228ENST00000629725 KCNJ12Q14500 433 aa20.93■□□□□ 0.94
TARDBP-228ENST00000629725 HNRNPA1L2Q32P51 320 aaKnown RBP20.93■□□□□ 0.94
TARDBP-228ENST00000629725 PIK3R6Q5UE93 754 aa20.93■□□□□ 0.94
TARDBP-228ENST00000629725 RESP18Q5W5W9 173 aa20.93■□□□□ 0.94
TARDBP-228ENST00000629725 RFWD3Q6PCD5 774 aa20.93■□□□□ 0.94
TARDBP-228ENST00000629725 DHX40Q8IX18 779 aaKnown RBP20.93■□□□□ 0.94
TARDBP-228ENST00000629725 ZNF557Q8N988 423 aaPredicted RBP20.93■□□□□ 0.94
TARDBP-228ENST00000629725 FAXDC2Q96IV6 333 aa20.93■□□□□ 0.94
TARDBP-228ENST00000629725 ABCC13Q9NSE7 274 aa20.93■□□□□ 0.94
TARDBP-228ENST00000629725 ADAMTS1Q9UHI8 967 aa20.93■□□□□ 0.94
TARDBP-228ENST00000629725 SERTAD1Q9UHV2 236 aa20.93■□□□□ 0.94
TARDBP-228ENST00000629725 FZD4Q9ULV1 537 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms