RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 CACNA1IQ9P0X4 2223 aa21.01■□□□□ 0.95
PTCD3-220ENST00000627371 TRIM24O15164 1050 aa21■□□□□ 0.95
PTCD3-220ENST00000627371 TBL1XO60907 577 aa21■□□□□ 0.95
PTCD3-220ENST00000627371 CISD3P0C7P0 127 aa21■□□□□ 0.95
PTCD3-220ENST00000627371 PSMA2P25787 234 aa21■□□□□ 0.95
PTCD3-220ENST00000627371 ZNF252P-AS1Q0IIN9 211 aa21■□□□□ 0.95
PTCD3-220ENST00000627371 ACBD5Q5T8D3 534 aaPredicted RBP21■□□□□ 0.95
PTCD3-220ENST00000627371 ARHGEF26Q96DR7 871 aa21■□□□□ 0.95
PTCD3-220ENST00000627371 HAPLN3Q96S86 360 aa21■□□□□ 0.95
PTCD3-220ENST00000627371 PACSIN1Q9BY11 444 aa21■□□□□ 0.95
PTCD3-220ENST00000627371 TRIM7Q9C029 511 aa21■□□□□ 0.95
PTCD3-220ENST00000627371 CLEC4EQ9ULY5 219 aa21■□□□□ 0.95
PTCD3-220ENST00000627371 SLC27A6Q9Y2P4 619 aa21■□□□□ 0.95
PTCD3-220ENST00000627371 K7EQS6 105 aa20.99■□□□□ 0.95
PTCD3-220ENST00000627371 H2AFZP0C0S5 128 aa20.99■□□□□ 0.95
PTCD3-220ENST00000627371 NUBP1P53384 320 aa20.99■□□□□ 0.95
PTCD3-220ENST00000627371 RPS24P62847 133 aaKnown RBP20.99■□□□□ 0.95
PTCD3-220ENST00000627371 AUHQ13825 339 aaKnown RBP20.99■□□□□ 0.95
PTCD3-220ENST00000627371 ARL13BQ3SXY8 428 aa20.99■□□□□ 0.95
PTCD3-220ENST00000627371 TTC39BQ5VTQ0 682 aaPredicted RBP20.99■□□□□ 0.95
PTCD3-220ENST00000627371 FBXL22Q6P050 247 aa20.99■□□□□ 0.95
PTCD3-220ENST00000627371 Q6ZS52 159 aa20.99■□□□□ 0.95
PTCD3-220ENST00000627371 H2AFVQ71UI9 128 aa20.99■□□□□ 0.95
PTCD3-220ENST00000627371 CCDC170Q8IYT3 715 aa20.99■□□□□ 0.95
PTCD3-220ENST00000627371 DTWD2Q8NBA8 298 aa20.99■□□□□ 0.95
PTCD3-220ENST00000627371 CCDC26Q8TAB7 109 aa20.99■□□□□ 0.95
PTCD3-220ENST00000627371 CTNNBL1Q8WYA6 563 aaPredicted RBP20.99■□□□□ 0.95
PTCD3-220ENST00000627371 NTAN1Q96AB6 310 aa20.99■□□□□ 0.95
PTCD3-220ENST00000627371 C1orf74Q96LT6 269 aa20.99■□□□□ 0.95
PTCD3-220ENST00000627371 NUP85Q9BW27 656 aa20.99■□□□□ 0.95
PTCD3-220ENST00000627371 GRPEL1Q9HAV7 217 aa20.99■□□□□ 0.95
PTCD3-220ENST00000627371 TMPRSS4Q9NRS4 437 aa20.99■□□□□ 0.95
PTCD3-220ENST00000627371 TBC1D3BA6NDS4 549 aa20.98■□□□□ 0.95
PTCD3-220ENST00000627371 GOLGA6L3A6NEY3 463 aa20.98■□□□□ 0.95
PTCD3-220ENST00000627371 GOLGA6L6A8MZA4 724 aa20.98■□□□□ 0.95
PTCD3-220ENST00000627371 RNF40O75150 1001 aa20.98■□□□□ 0.95
PTCD3-220ENST00000627371 TMEM253P0C7T8 217 aa20.98■□□□□ 0.95
PTCD3-220ENST00000627371 GGCXP38435 758 aa20.98■□□□□ 0.95
PTCD3-220ENST00000627371 TNFRSF4P43489 277 aa20.98■□□□□ 0.95
PTCD3-220ENST00000627371 C5orf22Q49AR2 442 aa20.98■□□□□ 0.95
PTCD3-220ENST00000627371 RABGAP1LQ5R372 815 aa20.98■□□□□ 0.95
PTCD3-220ENST00000627371 NUDT18Q6ZVK8 323 aa20.98■□□□□ 0.95
PTCD3-220ENST00000627371 TMTC1Q8IUR5 882 aa20.98■□□□□ 0.95
PTCD3-220ENST00000627371 SFTPA1Q8IWL2 248 aa20.98■□□□□ 0.95
PTCD3-220ENST00000627371 CFAP52Q8N1V2 620 aa20.98■□□□□ 0.95
PTCD3-220ENST00000627371 ZNF557Q8N988 423 aaPredicted RBP20.98■□□□□ 0.95
PTCD3-220ENST00000627371 SIK2Q9H0K1 926 aa20.98■□□□□ 0.95
PTCD3-220ENST00000627371 STIM2Q9P246 746 aa20.98■□□□□ 0.95
PTCD3-220ENST00000627371 VANGL2Q9ULK5 521 aa20.98■□□□□ 0.95
PTCD3-220ENST00000627371 WDFY4Q6ZS81 3184 aa20.98■□□□□ 0.95
PTCD3-220ENST00000627371 LCA5LO95447 670 aa20.97■□□□□ 0.95
PTCD3-220ENST00000627371 ADRA1BP35368 520 aa20.97■□□□□ 0.95
PTCD3-220ENST00000627371 SCAPQ12770 1279 aa20.97■□□□□ 0.95
PTCD3-220ENST00000627371 GAS6Q14393 721 aa20.97■□□□□ 0.95
PTCD3-220ENST00000627371 C10orf76Q5T2E6 689 aa20.97■□□□□ 0.95
PTCD3-220ENST00000627371 ANKS1BQ7Z6G8 1248 aa20.97■□□□□ 0.95
PTCD3-220ENST00000627371 C14orf80Q86SX3 495 aa20.97■□□□□ 0.95
PTCD3-220ENST00000627371 MFN1Q8IWA4 741 aa20.97■□□□□ 0.95
PTCD3-220ENST00000627371 ZNF683Q8IZ20 524 aa20.97■□□□□ 0.95
PTCD3-220ENST00000627371 CCDC185Q8N715 623 aa20.97■□□□□ 0.95
PTCD3-220ENST00000627371 RPRD1AQ96P16 312 aaPredicted RBP20.97■□□□□ 0.95
PTCD3-220ENST00000627371 UVRAGQ9P2Y5 699 aa20.97■□□□□ 0.95
PTCD3-220ENST00000627371 ANAPC7Q9UJX3 599 aa20.97■□□□□ 0.95
PTCD3-220ENST00000627371 A0A1B0GVM2 712 aa20.96■□□□□ 0.95
PTCD3-220ENST00000627371 TCAF2A6NFQ2 919 aa20.96■□□□□ 0.95
PTCD3-220ENST00000627371 RNF8O76064 485 aa20.96■□□□□ 0.95
PTCD3-220ENST00000627371 LUC7L3O95232 432 aaKnown RBP20.96■□□□□ 0.95
PTCD3-220ENST00000627371 CHRM1P11229 460 aaPredicted RBP20.96■□□□□ 0.95
PTCD3-220ENST00000627371 HLA-FP30511 346 aa20.96■□□□□ 0.95
PTCD3-220ENST00000627371 CYLC1P35663 651 aaPredicted RBP20.96■□□□□ 0.95
PTCD3-220ENST00000627371 AIF1P55008 147 aa20.96■□□□□ 0.95
PTCD3-220ENST00000627371 MTAPQ13126 283 aa20.96■□□□□ 0.95
PTCD3-220ENST00000627371 ACAP1Q15027 740 aa20.96■□□□□ 0.95
PTCD3-220ENST00000627371 SCYL2Q6P3W7 929 aa20.96■□□□□ 0.95
PTCD3-220ENST00000627371 MAMSTRQ6ZN01 415 aa20.96■□□□□ 0.95
PTCD3-220ENST00000627371 SLFN11Q7Z7L1 901 aa20.96■□□□□ 0.95
PTCD3-220ENST00000627371 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.96■□□□□ 0.95
PTCD3-220ENST00000627371 ZNF564Q8TBZ8 553 aaPredicted RBP20.96■□□□□ 0.95
PTCD3-220ENST00000627371 WFDC5Q8TCV5 224 aa20.96■□□□□ 0.95
PTCD3-220ENST00000627371 IGSF8Q969P0 613 aa20.96■□□□□ 0.95
PTCD3-220ENST00000627371 INTUQ9ULD6 942 aa20.96■□□□□ 0.95
PTCD3-220ENST00000627371 SNX10Q9Y5X0 201 aa20.96■□□□□ 0.95
PTCD3-220ENST00000627371 SOWAHDA6NJG2 315 aa20.95■□□□□ 0.94
PTCD3-220ENST00000627371 CHURC1-FNTBB4DL54 471 aa20.95■□□□□ 0.94
PTCD3-220ENST00000627371 PRRT4C9JH25 899 aa20.95■□□□□ 0.94
PTCD3-220ENST00000627371 KIR2DL1P43626 348 aaPredicted RBP20.95■□□□□ 0.94
PTCD3-220ENST00000627371 SEC13P55735 322 aa20.95■□□□□ 0.94
PTCD3-220ENST00000627371 MRPS21P82921 87 aaKnown RBP20.95■□□□□ 0.94
PTCD3-220ENST00000627371 NRG1Q02297 640 aaPredicted RBP20.95■□□□□ 0.94
PTCD3-220ENST00000627371 CDH18Q13634 790 aa20.95■□□□□ 0.94
PTCD3-220ENST00000627371 PIGHQ14442 188 aaPredicted RBP20.95■□□□□ 0.94
PTCD3-220ENST00000627371 GEN1Q17RS7 908 aa20.95■□□□□ 0.94
PTCD3-220ENST00000627371 LRRC31Q6UY01 552 aa20.95■□□□□ 0.94
PTCD3-220ENST00000627371 CCDC117Q8IWD4 279 aaPredicted RBP20.95■□□□□ 0.94
PTCD3-220ENST00000627371 CARNMT1Q8N4J0 409 aa20.95■□□□□ 0.94
PTCD3-220ENST00000627371 SPEM1Q8N4L4 309 aa20.95■□□□□ 0.94
PTCD3-220ENST00000627371 ARFGAP1Q8N6T3 406 aa20.95■□□□□ 0.94
PTCD3-220ENST00000627371 NIPA2Q8N8Q9 360 aa20.95■□□□□ 0.94
PTCD3-220ENST00000627371 RPLP0P6Q8NHW5 317 aa20.95■□□□□ 0.94
PTCD3-220ENST00000627371 FIBINQ8TAL6 211 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms