RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 SIM2Q14190 667 aaPredicted RBP17.33■□□□□ 0.36
UBE3D-208ENST00000626828 ACBD5Q5T8D3 534 aaPredicted RBP17.33■□□□□ 0.36
UBE3D-208ENST00000626828 RAP1GAP2Q684P5 730 aa17.33■□□□□ 0.36
UBE3D-208ENST00000626828 KIAA0907Q7Z7F0 614 aaPredicted RBP17.33■□□□□ 0.36
UBE3D-208ENST00000626828 RASSF3Q86WH2 238 aa17.33■□□□□ 0.36
UBE3D-208ENST00000626828 CHSY1Q86X52 802 aa17.33■□□□□ 0.36
UBE3D-208ENST00000626828 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.33■□□□□ 0.36
UBE3D-208ENST00000626828 VCPIP1Q96JH7 1222 aa17.33■□□□□ 0.36
UBE3D-208ENST00000626828 PRMT1Q99873 361 aaKnown RBP17.33■□□□□ 0.36
UBE3D-208ENST00000626828 HAUS4Q9H6D7 363 aa17.33■□□□□ 0.36
UBE3D-208ENST00000626828 ZDHHC4Q9NPG8 344 aa17.33■□□□□ 0.36
UBE3D-208ENST00000626828 PIGVQ9NUD9 493 aa17.33■□□□□ 0.36
UBE3D-208ENST00000626828 THAP10Q9P2Z0 257 aaPredicted RBP17.33■□□□□ 0.36
UBE3D-208ENST00000626828 CBFA2T2O43439 604 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 ENDOD1O94919 500 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 PDGFRAP16234 1089 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 WASP42768 502 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 GSCP56915 257 aaPredicted RBP17.32■□□□□ 0.36
UBE3D-208ENST00000626828 KLHL30Q0D2K2 578 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 USP39Q53GS9 565 aaKnown RBP17.32■□□□□ 0.36
UBE3D-208ENST00000626828 RABGAP1LQ5R372 815 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 CEP68Q76N32 757 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 CHST9Q7L1S5 443 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 PHLDB2Q86SQ0 1253 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 MFN1Q8IWA4 741 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 CFAP52Q8N1V2 620 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 CARNMT1Q8N4J0 409 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 GAB3Q8WWW8 586 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 RXFP2Q8WXD0 754 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 SYN2Q92777 582 aaPredicted RBP17.32■□□□□ 0.36
UBE3D-208ENST00000626828 ACOX2Q99424 681 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 TBCBQ99426 244 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 GABRG3Q99928 467 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 SYT11Q9BT88 431 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 SELENOOQ9BVL4 669 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 CIPCQ9C0C6 399 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 METTL5Q9NRN9 209 aaKnown RBP17.32■□□□□ 0.36
UBE3D-208ENST00000626828 ABCB8Q9NUT2 735 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 ARHGEF38Q9NXL2 777 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 GGA2Q9UJY4 613 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 CAPN11Q9UMQ6 739 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 PLA2G4CQ9UP65 541 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 BZW2Q9Y6E2 419 aaKnown RBP17.32■□□□□ 0.36
UBE3D-208ENST00000626828 GON4LQ3T8J9 2241 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 ABCA7Q8IZY2 2146 aa17.32■□□□□ 0.36
UBE3D-208ENST00000626828 SIGLEC16A6NMB1 481 aa17.31■□□□□ 0.36
UBE3D-208ENST00000626828 H0Y626 953 aa17.31■□□□□ 0.36
UBE3D-208ENST00000626828 PAGE1O75459 146 aa17.31■□□□□ 0.36
UBE3D-208ENST00000626828 RPP40O75818 363 aaKnown RBP17.31■□□□□ 0.36
UBE3D-208ENST00000626828 ATP5BP06576 529 aaKnown RBP17.31■□□□□ 0.36
UBE3D-208ENST00000626828 PABPC1P11940 636 aaKnown RBP17.31■□□□□ 0.36
UBE3D-208ENST00000626828 GZMAP12544 262 aa17.31■□□□□ 0.36
UBE3D-208ENST00000626828 HOXB2P14652 356 aa17.31■□□□□ 0.36
UBE3D-208ENST00000626828 POLR2EP19388 210 aaKnown RBP17.31■□□□□ 0.36
UBE3D-208ENST00000626828 TFE3P19532 575 aaPredicted RBP17.31■□□□□ 0.36
UBE3D-208ENST00000626828 ZBED6P86452 979 aa17.31■□□□□ 0.36
UBE3D-208ENST00000626828 AUHQ13825 339 aaKnown RBP17.31■□□□□ 0.36
UBE3D-208ENST00000626828 TMEM215Q68D42 235 aa17.31■□□□□ 0.36
UBE3D-208ENST00000626828 ANO7Q6IWH7 933 aa17.31■□□□□ 0.36
UBE3D-208ENST00000626828 FBXL22Q6P050 247 aa17.31■□□□□ 0.36
UBE3D-208ENST00000626828 MCOLN2Q8IZK6 566 aa17.31■□□□□ 0.36
UBE3D-208ENST00000626828 AHI1Q8N157 1196 aa17.31■□□□□ 0.36
UBE3D-208ENST00000626828 C3orf20Q8ND61 904 aa17.31■□□□□ 0.36
UBE3D-208ENST00000626828 CPLX3Q8WVH0 158 aa17.31■□□□□ 0.36
UBE3D-208ENST00000626828 MYEOVQ96EZ4 313 aa17.31■□□□□ 0.36
UBE3D-208ENST00000626828 C1orf74Q96LT6 269 aa17.31■□□□□ 0.36
UBE3D-208ENST00000626828 CFAP57Q96MR6 1250 aa17.31■□□□□ 0.36
UBE3D-208ENST00000626828 PRICKLE1Q96MT3 831 aaPredicted RBP17.31■□□□□ 0.36
UBE3D-208ENST00000626828 XPO4Q9C0E2 1151 aaKnown RBP17.31■□□□□ 0.36
UBE3D-208ENST00000626828 TKTL2Q9H0I9 626 aa17.31■□□□□ 0.36
UBE3D-208ENST00000626828 SIK2Q9H0K1 926 aa17.31■□□□□ 0.36
UBE3D-208ENST00000626828 CALCOCO1Q9P1Z2 691 aa17.31■□□□□ 0.36
UBE3D-208ENST00000626828 KIAA1522Q9P206 1035 aaPredicted RBP17.31■□□□□ 0.36
UBE3D-208ENST00000626828 LUC7L2Q9Y383 392 aaKnown RBP17.31■□□□□ 0.36
UBE3D-208ENST00000626828 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.31■□□□□ 0.36
UBE3D-208ENST00000626828 STON1Q9Y6Q2 735 aa17.31■□□□□ 0.36
UBE3D-208ENST00000626828 C2CD4BA6NLJ0 364 aa17.3■□□□□ 0.36
UBE3D-208ENST00000626828 WASH3PC4AMC7 463 aa17.3■□□□□ 0.36
UBE3D-208ENST00000626828 LUC7L3O95232 432 aaKnown RBP17.3■□□□□ 0.36
UBE3D-208ENST00000626828 ADCY5O95622 1261 aa17.3■□□□□ 0.36
UBE3D-208ENST00000626828 SDC4P31431 198 aa17.3■□□□□ 0.36
UBE3D-208ENST00000626828 OXCT1P55809 520 aa17.3■□□□□ 0.36
UBE3D-208ENST00000626828 SRSF5Q13243 272 aaKnown RBP17.3■□□□□ 0.36
UBE3D-208ENST00000626828 CDH18Q13634 790 aa17.3■□□□□ 0.36
UBE3D-208ENST00000626828 ENPP2Q13822 863 aa17.3■□□□□ 0.36
UBE3D-208ENST00000626828 BYSLQ13895 437 aaKnown RBP17.3■□□□□ 0.36
UBE3D-208ENST00000626828 CCDC14Q49A88 953 aa17.3■□□□□ 0.36
UBE3D-208ENST00000626828 TTC39BQ5VTQ0 682 aaPredicted RBP17.3■□□□□ 0.36
UBE3D-208ENST00000626828 OTUD1Q5VV17 481 aaPredicted RBP17.3■□□□□ 0.36
UBE3D-208ENST00000626828 MBLAC2Q68D91 279 aa17.3■□□□□ 0.36
UBE3D-208ENST00000626828 TRNP1Q6NT89 227 aa17.3■□□□□ 0.36
UBE3D-208ENST00000626828 PRR23BQ6ZRT6 265 aa17.3■□□□□ 0.36
UBE3D-208ENST00000626828 MON1BQ7L1V2 547 aa17.3■□□□□ 0.36
UBE3D-208ENST00000626828 ZNF571Q7Z3V5 609 aaPredicted RBP17.3■□□□□ 0.36
UBE3D-208ENST00000626828 BNIPLQ7Z465 357 aa17.3■□□□□ 0.36
UBE3D-208ENST00000626828 ADIPOR2Q86V24 386 aa17.3■□□□□ 0.36
UBE3D-208ENST00000626828 PGBD3Q8N328 593 aa17.3■□□□□ 0.36
UBE3D-208ENST00000626828 EMC1Q8N766 993 aa17.3■□□□□ 0.36
UBE3D-208ENST00000626828 RUBCNQ92622 972 aa17.3■□□□□ 0.36
UBE3D-208ENST00000626828 LMLNQ96KR4 655 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms