RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 PEAR1Q5VY43 1037 aaPredicted RBP11.24□□□□□ -0.61
SSBP4-215ENST00000625926 DPY19L2P1Q6NXN4 242 aa11.24□□□□□ -0.61
SSBP4-215ENST00000625926 SLC23A3Q6PIS1 610 aa11.24□□□□□ -0.61
SSBP4-215ENST00000625926 C11orf57Q6ZUT1 292 aaPredicted RBP11.24□□□□□ -0.61
SSBP4-215ENST00000625926 RABEPKQ7Z6M1 372 aa11.24□□□□□ -0.61
SSBP4-215ENST00000625926 SLC47A2Q86VL8 602 aa11.24□□□□□ -0.61
SSBP4-215ENST00000625926 FAM71AQ8IYT1 594 aa11.24□□□□□ -0.61
SSBP4-215ENST00000625926 DEFB106AQ8N104 65 aa11.24□□□□□ -0.61
SSBP4-215ENST00000625926 CARNMT1Q8N4J0 409 aa11.24□□□□□ -0.61
SSBP4-215ENST00000625926 C1orf131Q8NDD1 294 aaKnown RBP11.24□□□□□ -0.61
SSBP4-215ENST00000625926 ENOX1Q8TC92 643 aaKnown RBP11.24□□□□□ -0.61
SSBP4-215ENST00000625926 CYB5D2Q8WUJ1 264 aa11.24□□□□□ -0.61
SSBP4-215ENST00000625926 FOXJ1Q92949 421 aa11.24□□□□□ -0.61
SSBP4-215ENST00000625926 ZNF419Q96HQ0 510 aaPredicted RBP11.24□□□□□ -0.61
SSBP4-215ENST00000625926 NUCKS1Q9H1E3 243 aaKnown RBP11.24□□□□□ -0.61
SSBP4-215ENST00000625926 PDCL3Q9H2J4 239 aa11.24□□□□□ -0.61
SSBP4-215ENST00000625926 TMEM245Q9H330 911 aa11.24□□□□□ -0.61
SSBP4-215ENST00000625926 SYNCQ9H7C4 482 aa11.24□□□□□ -0.61
SSBP4-215ENST00000625926 TMEM9BQ9NQ34 198 aa11.24□□□□□ -0.61
SSBP4-215ENST00000625926 TJP2Q9UDY2 1190 aa11.24□□□□□ -0.61
SSBP4-215ENST00000625926 AJAP1Q9UKB5 411 aaPredicted RBP11.24□□□□□ -0.61
SSBP4-215ENST00000625926 NFE2L3Q9Y4A8 694 aa11.24□□□□□ -0.61
SSBP4-215ENST00000625926 CEP83Q9Y592 693 aa11.24□□□□□ -0.61
SSBP4-215ENST00000625926 KCNU1A8MYU2 1149 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 GOLGA6L22H0YM25 854 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 CDX4O14627 284 aaPredicted RBP11.23□□□□□ -0.61
SSBP4-215ENST00000625926 HSF2BPO75031 334 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 IGLV3-25P01717 112 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 CFIP05156 583 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 ADRB1P08588 477 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 PNMA6AP0CW24 399 aaPredicted RBP11.23□□□□□ -0.61
SSBP4-215ENST00000625926 HLA-EP13747 358 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 CYP11B1P15538 503 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 ABCB4P21439 1286 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 KCNA4P22459 653 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 TPMTP51580 245 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 COPAP53621 1224 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 RPS24P62847 133 aaKnown RBP11.23□□□□□ -0.61
SSBP4-215ENST00000625926 GFPT1Q06210 699 aaPredicted RBP11.23□□□□□ -0.61
SSBP4-215ENST00000625926 EIF4EBP2Q13542 120 aaPredicted RBP11.23□□□□□ -0.61
SSBP4-215ENST00000625926 CAMK2GQ13555 558 aaPredicted RBP11.23□□□□□ -0.61
SSBP4-215ENST00000625926 CDH18Q13634 790 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 RAPGEF1Q13905 1077 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 DRAP1Q14919 205 aaPredicted RBP11.23□□□□□ -0.61
SSBP4-215ENST00000625926 ACAP1Q15027 740 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 DUOXA1Q1HG43 343 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 WDR45BQ5MNZ6 344 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 SYCP2LQ5T4T6 812 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 OR6B2Q6IFH4 312 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 CHSY1Q86X52 802 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 SLC41A1Q8IVJ1 513 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 RGL4Q8IZJ4 473 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 LGI2Q8N0V4 545 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 CFAP52Q8N1V2 620 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 ATP6V0D2Q8N8Y2 350 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 TMEM35BQ8NCS4 154 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 OR2T3Q8NH03 318 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 WFDC5Q8TCV5 224 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 GPT2Q8TD30 523 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 TOE1Q96GM8 510 aaKnown RBP11.23□□□□□ -0.61
SSBP4-215ENST00000625926 BTN2A3PQ96KV6 586 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 HSPA12BQ96MM6 686 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 PRICKLE1Q96MT3 831 aaPredicted RBP11.23□□□□□ -0.61
SSBP4-215ENST00000625926 SLC2A13Q96QE2 648 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 FAM204AQ9H8W3 233 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 CD93Q9NPY3 652 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 WSB2Q9NYS7 404 aaPredicted RBP11.23□□□□□ -0.61
SSBP4-215ENST00000625926 USP36Q9P275 1121 aaKnown RBP11.23□□□□□ -0.61
SSBP4-215ENST00000625926 SUN2Q9UH99 717 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 XPO7Q9UIA9 1087 aaKnown RBP11.23□□□□□ -0.61
SSBP4-215ENST00000625926 SLC6A14Q9UN76 642 aa11.23□□□□□ -0.61
SSBP4-215ENST00000625926 ATXN2Q99700 1313 aaKnown RBP11.23□□□□□ -0.61
SSBP4-215ENST00000625926 SYNJ2BP-COX16A0A087WUM0 186 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 H0Y626 953 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 GRAP2O75791 330 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 LUC7L3O95232 432 aaKnown RBP11.22□□□□□ -0.61
SSBP4-215ENST00000625926 KCNK5O95279 499 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 ASLP04424 464 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 ERBB2P04626 1255 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 TPM2P07951 284 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 SERPINF2P08697 491 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 UCHL3P15374 230 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 ENGP17813 658 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 TACR2P21452 398 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 CCR1P32246 355 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 HELZP42694 1942 aaKnown RBP11.22□□□□□ -0.61
SSBP4-215ENST00000625926 ATXN3P54252 364 aaPredicted RBP11.22□□□□□ -0.61
SSBP4-215ENST00000625926 ST8SIA6P61647 398 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 PITX1P78337 314 aaPredicted RBP11.22□□□□□ -0.61
SSBP4-215ENST00000625926 SLC6A3Q01959 620 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 MTA1Q13330 715 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 RAP1GAP2Q684P5 730 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 OLFML1Q6UWY5 402 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 RBM43Q6ZSC3 357 aaKnown RBP11.22□□□□□ -0.61
SSBP4-215ENST00000625926 FAM183BPQ6ZVS7 135 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 ZDHHC17Q8IUH5 632 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 CADM4Q8NFZ8 388 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 RNF34Q969K3 372 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 TTC17Q96AE7 1141 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 MYEOVQ96EZ4 313 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms