RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 PMS1P54277 932 aaKnown RBP11.51□□□□□ -0.57
DDX41-218ENST00000625286 SHBQ15464 509 aa11.51□□□□□ -0.57
DDX41-218ENST00000625286 SMAD1Q15797 465 aaKnown RBP11.51□□□□□ -0.57
DDX41-218ENST00000625286 PIK3R6Q5UE93 754 aa11.51□□□□□ -0.57
DDX41-218ENST00000625286 PMF1Q6P1K2 205 aa11.51□□□□□ -0.57
DDX41-218ENST00000625286 KRBA2Q6ZNG9 492 aa11.51□□□□□ -0.57
DDX41-218ENST00000625286 CLEC4CQ8WTT0 213 aa11.51□□□□□ -0.57
DDX41-218ENST00000625286 FAXDC2Q96IV6 333 aa11.51□□□□□ -0.57
DDX41-218ENST00000625286 LRIG1Q96JA1 1093 aa11.51□□□□□ -0.57
DDX41-218ENST00000625286 MRGPRX3Q96LB0 322 aa11.51□□□□□ -0.57
DDX41-218ENST00000625286 CDC6Q99741 560 aa11.51□□□□□ -0.57
DDX41-218ENST00000625286 PLA2G4CQ9UP65 541 aa11.51□□□□□ -0.57
DDX41-218ENST00000625286 COQ4Q9Y3A0 265 aa11.51□□□□□ -0.57
DDX41-218ENST00000625286 HBS1LQ9Y450 684 aaKnown RBP11.51□□□□□ -0.57
DDX41-218ENST00000625286 MGAQ8IWI9 3026 aa11.5□□□□□ -0.57
DDX41-218ENST00000625286 O00370 1275 aa11.5□□□□□ -0.57
DDX41-218ENST00000625286 PIK3R2O00459 728 aa11.5□□□□□ -0.57
DDX41-218ENST00000625286 TNFSF14O43557 240 aa11.5□□□□□ -0.57
DDX41-218ENST00000625286 PCDHGA12O60330 932 aa11.5□□□□□ -0.57
DDX41-218ENST00000625286 TBL1XO60907 577 aa11.5□□□□□ -0.57
DDX41-218ENST00000625286 FYNP06241 537 aa11.5□□□□□ -0.57
DDX41-218ENST00000625286 DLDP09622 509 aaKnown RBP11.5□□□□□ -0.57
DDX41-218ENST00000625286 RPL13P26373 211 aaKnown RBP11.5□□□□□ -0.57
DDX41-218ENST00000625286 CD27P26842 260 aa11.5□□□□□ -0.57
DDX41-218ENST00000625286 CTSOP43234 321 aaPredicted RBP11.5□□□□□ -0.57
DDX41-218ENST00000625286 GRIA4P48058 902 aa11.5□□□□□ -0.57
DDX41-218ENST00000625286 HARS2P49590 506 aaKnown RBP11.5□□□□□ -0.57
DDX41-218ENST00000625286 DAOAP59103 153 aa11.5□□□□□ -0.57
DDX41-218ENST00000625286 KCNJ12Q14500 433 aa11.5□□□□□ -0.57
DDX41-218ENST00000625286 EDRF1Q3B7T1 1238 aa11.5□□□□□ -0.57
DDX41-218ENST00000625286 FSCBQ5H9T9 825 aa11.5□□□□□ -0.57
DDX41-218ENST00000625286 MMS22LQ6ZRQ5 1243 aa11.5□□□□□ -0.57
DDX41-218ENST00000625286 WFIKKN2Q8TEU8 576 aa11.5□□□□□ -0.57
DDX41-218ENST00000625286 SLC35F5Q8WV83 523 aa11.5□□□□□ -0.57
DDX41-218ENST00000625286 KCTD13Q8WZ19 329 aa11.5□□□□□ -0.57
DDX41-218ENST00000625286 IGSF8Q969P0 613 aa11.5□□□□□ -0.57
DDX41-218ENST00000625286 TTC17Q96AE7 1141 aa11.5□□□□□ -0.57
DDX41-218ENST00000625286 PRICKLE1Q96MT3 831 aaPredicted RBP11.5□□□□□ -0.57
DDX41-218ENST00000625286 BTBD1Q9H0C5 482 aa11.5□□□□□ -0.57
DDX41-218ENST00000625286 RSPH9Q9H1X1 276 aaPredicted RBP11.5□□□□□ -0.57
DDX41-218ENST00000625286 OLA1Q9NTK5 396 aaKnown RBP11.5□□□□□ -0.57
DDX41-218ENST00000625286 SHROOM3Q8TF72 1996 aa11.5□□□□□ -0.57
DDX41-218ENST00000625286 PTPRQQ9UMZ3 2332 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 MYLKQ15746 1914 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 CFAP46Q8IYW2 2715 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 SIN3BO75182 1162 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 LCP1P13796 627 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 PRCPP42785 496 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 RGS7P49802 495 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 BCAT1P54687 386 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 GALCP54803 685 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 ARID5AQ03989 594 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 ZBTB16Q05516 673 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 BST2Q10589 180 aaKnown RBP11.49□□□□□ -0.57
DDX41-218ENST00000625286 LRMPQ12912 555 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 CUL2Q13617 745 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 SGO2Q562F6 1265 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 CCDC157Q569K6 752 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 C9orf64Q5T6V5 341 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 KIAA0895LQ68EN5 471 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 MSANTD2Q6P1R3 559 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 DHRS13Q6UX07 377 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 GATAD2AQ86YP4 633 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 AHI1Q8N157 1196 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 SCML4Q8N228 414 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 TTC39CQ8N584 583 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 CCDC150Q8NCX0 1101 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 RNF139Q8WU17 664 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 KAT5Q92993 513 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 SPATA32Q96LK8 384 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 SLC6A18Q96N87 628 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 NEUROG2Q9H2A3 272 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 PABPC3Q9H361 631 aaKnown RBP11.49□□□□□ -0.57
DDX41-218ENST00000625286 LRRC4Q9HBW1 653 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 SCUBE2Q9NQ36 999 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 ABCC13Q9NSE7 274 aa11.49□□□□□ -0.57
DDX41-218ENST00000625286 FLNBO75369 2602 aaKnown RBP11.48□□□□□ -0.57
DDX41-218ENST00000625286 A0A087WV48 116 aa11.48□□□□□ -0.57
DDX41-218ENST00000625286 A0A1B0GTQ1 180 aa11.48□□□□□ -0.57
DDX41-218ENST00000625286 A0A1W2PR77 199 aa11.48□□□□□ -0.57
DDX41-218ENST00000625286 TTC34A8MYJ7 566 aa11.48□□□□□ -0.57
DDX41-218ENST00000625286 VILLO15195 856 aa11.48□□□□□ -0.57
DDX41-218ENST00000625286 PAPSS1O43252 624 aaPredicted RBP11.48□□□□□ -0.57
DDX41-218ENST00000625286 ZNF202O95125 648 aa11.48□□□□□ -0.57
DDX41-218ENST00000625286 LATS1O95835 1130 aa11.48□□□□□ -0.57
DDX41-218ENST00000625286 DNTTP04053 509 aa11.48□□□□□ -0.57
DDX41-218ENST00000625286 CENPBP07199 599 aaPredicted RBP11.48□□□□□ -0.57
DDX41-218ENST00000625286 VDRP11473 427 aa11.48□□□□□ -0.57
DDX41-218ENST00000625286 CD19P15391 556 aa11.48□□□□□ -0.57
DDX41-218ENST00000625286 RPS24P62847 133 aaKnown RBP11.48□□□□□ -0.57
DDX41-218ENST00000625286 SUZ12Q15022 739 aaKnown RBP11.48□□□□□ -0.57
DDX41-218ENST00000625286 MPP7Q5T2T1 576 aa11.48□□□□□ -0.57
DDX41-218ENST00000625286 ZNF776Q68DI1 518 aaPredicted RBP11.48□□□□□ -0.57
DDX41-218ENST00000625286 ANKRD40Q6AI12 368 aa11.48□□□□□ -0.57
DDX41-218ENST00000625286 NCEH1Q6PIU2 408 aa11.48□□□□□ -0.57
DDX41-218ENST00000625286 LCLAT1Q6UWP7 414 aa11.48□□□□□ -0.57
DDX41-218ENST00000625286 FIBINQ8TAL6 211 aa11.48□□□□□ -0.57
DDX41-218ENST00000625286 FCRL2Q96LA5 508 aaPredicted RBP11.48□□□□□ -0.57
DDX41-218ENST00000625286 IPO9Q96P70 1041 aaKnown RBP11.48□□□□□ -0.57
DDX41-218ENST00000625286 FAM129BQ96TA1 746 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms