RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 RNF103O00237 685 aa16.83■□□□□ 0.28
LDB3-208ENST00000623007 BRAFP15056 766 aa16.83■□□□□ 0.28
LDB3-208ENST00000623007 CPB1P15086 417 aa16.83■□□□□ 0.28
LDB3-208ENST00000623007 YWHAQP27348 245 aa16.83■□□□□ 0.28
LDB3-208ENST00000623007 ELK3P41970 407 aa16.83■□□□□ 0.28
LDB3-208ENST00000623007 SLC11A1P49279 550 aa16.83■□□□□ 0.28
LDB3-208ENST00000623007 IFRD2Q12894 506 aaPredicted RBP16.83■□□□□ 0.28
LDB3-208ENST00000623007 NLRP14Q86W24 1093 aa16.83■□□□□ 0.28
LDB3-208ENST00000623007 CEP57Q86XR8 500 aa16.83■□□□□ 0.28
LDB3-208ENST00000623007 COLGALT1Q8NBJ5 622 aa16.83■□□□□ 0.28
LDB3-208ENST00000623007 MAML1Q92585 1016 aa16.83■□□□□ 0.28
LDB3-208ENST00000623007 TBC1D31Q96DN5 1066 aa16.83■□□□□ 0.28
LDB3-208ENST00000623007 DHRS4Q9BTZ2 278 aa16.83■□□□□ 0.28
LDB3-208ENST00000623007 MARCH5Q9NX47 278 aa16.83■□□□□ 0.28
LDB3-208ENST00000623007 BACE2Q9Y5Z0 518 aa16.83■□□□□ 0.28
LDB3-208ENST00000623007 TBKBP1A7MCY6 615 aa16.82■□□□□ 0.28
LDB3-208ENST00000623007 PRPF4O43172 522 aaKnown RBP eCLIP16.82■□□□□ 0.28
LDB3-208ENST00000623007 TBC1D4O60343 1298 aa16.82■□□□□ 0.28
LDB3-208ENST00000623007 B4GALT3O60512 393 aa16.82■□□□□ 0.28
LDB3-208ENST00000623007 LRIG2O94898 1065 aa16.82■□□□□ 0.28
LDB3-208ENST00000623007 CPP00450 1065 aa16.82■□□□□ 0.28
LDB3-208ENST00000623007 APOEP02649 317 aa16.82■□□□□ 0.28
LDB3-208ENST00000623007 KRT15P19012 456 aa16.82■□□□□ 0.28
LDB3-208ENST00000623007 TUFMP49411 452 aaKnown RBP16.82■□□□□ 0.28
LDB3-208ENST00000623007 GPX6P59796 221 aa16.82■□□□□ 0.28
LDB3-208ENST00000623007 NAB1Q13506 487 aa16.82■□□□□ 0.28
LDB3-208ENST00000623007 FASTKD3Q14CZ7 662 aaKnown RBP16.82■□□□□ 0.28
LDB3-208ENST00000623007 TIGD7Q6NT04 549 aaPredicted RBP16.82■□□□□ 0.28
LDB3-208ENST00000623007 LRRC8BQ6P9F7 803 aa16.82■□□□□ 0.28
LDB3-208ENST00000623007 TRABD2AQ86V40 505 aa16.82■□□□□ 0.28
LDB3-208ENST00000623007 ANKMY2Q8IV38 441 aa16.82■□□□□ 0.28
LDB3-208ENST00000623007 SCAMP5Q8TAC9 235 aa16.82■□□□□ 0.28
LDB3-208ENST00000623007 ADAM32Q8TC27 787 aa16.82■□□□□ 0.28
LDB3-208ENST00000623007 DYDC1Q8WWB3 177 aa16.82■□□□□ 0.28
LDB3-208ENST00000623007 OVCA2Q8WZ82 227 aa16.82■□□□□ 0.28
LDB3-208ENST00000623007 CHMP6Q96FZ7 201 aa16.82■□□□□ 0.28
LDB3-208ENST00000623007 TSGA13Q96PP4 275 aa16.82■□□□□ 0.28
LDB3-208ENST00000623007 ZC3H7BQ9UGR2 993 aaKnown RBP16.82■□□□□ 0.28
LDB3-208ENST00000623007 ZNF180Q9UJW8 692 aa16.82■□□□□ 0.28
LDB3-208ENST00000623007 ATXN2Q99700 1313 aaKnown RBP16.82■□□□□ 0.28
LDB3-208ENST00000623007 ABHD14A-ACY1A0A1B0GW23 586 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.81■□□□□ 0.28
LDB3-208ENST00000623007 TCRBV7S3A2A0A539 114 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 FAM47DPA6NHR8 397 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 POC1B-GALNT4F8VUJ3 575 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 CCNCP24863 283 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 GARSP41250 739 aaKnown RBP16.81■□□□□ 0.28
LDB3-208ENST00000623007 PRPSAP1Q14558 356 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 TMED2Q15363 201 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 USP41Q3LFD5 358 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 ATP6V0D2Q8N8Y2 350 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 PDZD8Q8NEN9 1154 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 FBF1Q8TES7 1133 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 PPANQ9NQ55 473 aaKnown RBP16.81■□□□□ 0.28
LDB3-208ENST00000623007 TMEM120BA0PK00 339 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 SDR42E2A6NKP2 422 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 WASH4PA8MWX3 477 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 KCNU1A8MYU2 1149 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 FAM155BO75949 473 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 INHBAP08476 426 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 VAV1P15498 845 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 CNTFP26441 200 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 FAAP100Q0VG06 881 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 MSS51Q4VC12 460 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 SCD5Q86SK9 330 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 GSDMBQ8TAX9 411 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 FATE1Q969F0 183 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 MTBPQ96DY7 904 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 CCT8L2Q96SF2 557 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 LGMNQ99538 433 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 EBNA1BP2Q99848 306 aaKnown RBP16.81■□□□□ 0.28
LDB3-208ENST00000623007 GPR62Q9BZJ7 368 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 KLHL8Q9P2G9 620 aaPredicted RBP16.81■□□□□ 0.28
LDB3-208ENST00000623007 PPARGC1AQ9UBK2 798 aaKnown RBP16.81■□□□□ 0.28
LDB3-208ENST00000623007 MAFFQ9ULX9 164 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 CHMP2BQ9UQN3 213 aa16.81■□□□□ 0.28
LDB3-208ENST00000623007 MYO16Q9Y6X6 1858 aa16.8■□□□□ 0.28
LDB3-208ENST00000623007 MTMR11A4FU01 709 aa16.8■□□□□ 0.28
LDB3-208ENST00000623007 F8W810 466 aa16.8■□□□□ 0.28
LDB3-208ENST00000623007 METTL18O95568 372 aa16.8■□□□□ 0.28
LDB3-208ENST00000623007 HAPLN1P10915 354 aaPredicted RBP16.8■□□□□ 0.28
LDB3-208ENST00000623007 PRKCHP24723 683 aa16.8■□□□□ 0.28
LDB3-208ENST00000623007 SSTR1P30872 391 aa16.8■□□□□ 0.28
LDB3-208ENST00000623007 IL9RQ01113 521 aa16.8■□□□□ 0.28
LDB3-208ENST00000623007 RING1Q06587 406 aa16.8■□□□□ 0.28
LDB3-208ENST00000623007 ANO4Q32M45 955 aa16.8■□□□□ 0.28
LDB3-208ENST00000623007 UBAP2Q5T6F2 1119 aaKnown RBP16.8■□□□□ 0.28
LDB3-208ENST00000623007 GKAP1Q5VSY0 366 aaPredicted RBP16.8■□□□□ 0.28
LDB3-208ENST00000623007 SLC8B1Q6J4K2 584 aa16.8■□□□□ 0.28
LDB3-208ENST00000623007 PID1Q7Z2X4 250 aa16.8■□□□□ 0.28
LDB3-208ENST00000623007 CAND1Q86VP6 1230 aaKnown RBP16.8■□□□□ 0.28
LDB3-208ENST00000623007 SRRM1Q8IYB3 904 aaKnown RBP16.8■□□□□ 0.28
LDB3-208ENST00000623007 GPR65Q8IYL9 337 aa16.8■□□□□ 0.28
LDB3-208ENST00000623007 ATXN2LQ8WWM7 1075 aaKnown RBP16.8■□□□□ 0.28
LDB3-208ENST00000623007 CDKL2Q92772 493 aa16.8■□□□□ 0.28
LDB3-208ENST00000623007 PAFAH2Q99487 392 aa16.8■□□□□ 0.28
LDB3-208ENST00000623007 KCNK9Q9NPC2 374 aa16.8■□□□□ 0.28
LDB3-208ENST00000623007 FNDC1Q4ZHG4 1894 aaPredicted RBP16.8■□□□□ 0.28
LDB3-208ENST00000623007 A0A1W2PQH9 124 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 TCRBV9S1A1TA0A576 114 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms