RNA–Protein interactions for RNA: ENST00000622698.4

PCDH11Y-207, Transcript of protocadherin 11 Y-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11Y, Length 4,824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11Y-207ENST00000622698 ARHGAP20Q9P2F6 1191 aa11.22□□□□□ -0.61
PCDH11Y-207ENST00000622698 DNAJB4Q9UDY4 337 aa11.22□□□□□ -0.61
PCDH11Y-207ENST00000622698 NFU1Q9UMS0 254 aa11.22□□□□□ -0.61
PCDH11Y-207ENST00000622698 TSPAN3O60637 253 aa11.22□□□□□ -0.61
PCDH11Y-207ENST00000622698 DDHD2O94830 711 aa11.22□□□□□ -0.61
PCDH11Y-207ENST00000622698 MIPP30301 263 aa11.22□□□□□ -0.61
PCDH11Y-207ENST00000622698 NDST2P52849 883 aa11.22□□□□□ -0.61
PCDH11Y-207ENST00000622698 XRCC4Q13426 336 aa11.22□□□□□ -0.61
PCDH11Y-207ENST00000622698 XKR4Q5GH76 650 aa11.22□□□□□ -0.61
PCDH11Y-207ENST00000622698 SYCP2LQ5T4T6 812 aa11.22□□□□□ -0.61
PCDH11Y-207ENST00000622698 PLEKHA7Q6IQ23 1121 aa11.22□□□□□ -0.61
PCDH11Y-207ENST00000622698 C15orf39Q6ZRI6 1047 aa11.22□□□□□ -0.61
PCDH11Y-207ENST00000622698 ZC3H18Q86VM9 953 aaKnown RBP11.22□□□□□ -0.61
PCDH11Y-207ENST00000622698 CHPFQ8IZ52 775 aa11.22□□□□□ -0.61
PCDH11Y-207ENST00000622698 PHC3Q8NDX5 983 aa11.22□□□□□ -0.61
PCDH11Y-207ENST00000622698 ARHGEF4Q9NR80 690 aa11.22□□□□□ -0.61
PCDH11Y-207ENST00000622698 TLDC2A0PJX2 215 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 TTC4O95801 387 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 HOXC8P31273 242 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 BMP8BP34820 402 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 CDK16Q00536 496 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 TBX2Q13207 712 aaPredicted RBP11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 CCNG2Q16589 344 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 ARMC6Q6NXE6 501 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 CLEC20AQ6ZU45 233 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 TMEM110Q86TL2 294 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 CXorf40AQ8TE69 158 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 DPH5Q9H2P9 285 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 VANGL2Q9ULK5 521 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 SLC4A1P02730 911 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 CYP1A1P04798 512 aaPredicted RBP11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 RHOP08100 348 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 KCNA5P22460 613 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 ADRA1BP35368 520 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 EIF4HQ15056 248 aaKnown RBP11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 SYTL3Q4VX76 610 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 MRNIPQ6NTE8 343 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 ARCQ7LC44 396 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 TAS2R42Q7RTR8 314 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 PSMG2Q969U7 264 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 TRMT2BQ96GJ1 504 aaKnown RBP11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 GPR62Q9BZJ7 368 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 RXFP1Q9HBX9 757 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 KANSL1LA0AUZ9 987 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 GDI1P31150 447 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 MMP13P45452 471 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 IRX5P78411 483 aaPredicted RBP11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 GPS1Q13098 491 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 MTF1Q14872 753 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 TPGS1Q6ZTW0 290 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 CMASQ8NFW8 434 aaPredicted RBP11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 GLMNQ92990 594 aa11.21□□□□□ -0.61
PCDH11Y-207ENST00000622698 MDM4O15151 490 aa11.21□□□□□ -0.62
PCDH11Y-207ENST00000622698 GATMP50440 423 aa11.21□□□□□ -0.62
PCDH11Y-207ENST00000622698 TERF1P54274 439 aa11.21□□□□□ -0.62
PCDH11Y-207ENST00000622698 CCDC85BQ15834 202 aaPredicted RBP11.21□□□□□ -0.62
PCDH11Y-207ENST00000622698 HHATQ5VTY9 493 aa11.21□□□□□ -0.62
PCDH11Y-207ENST00000622698 SETD3Q86TU7 594 aaPredicted RBP11.21□□□□□ -0.62
PCDH11Y-207ENST00000622698 EMC1Q8N766 993 aa11.21□□□□□ -0.62
PCDH11Y-207ENST00000622698 C12orf29Q8N999 325 aa11.21□□□□□ -0.62
PCDH11Y-207ENST00000622698 BAP1Q92560 729 aa11.21□□□□□ -0.62
PCDH11Y-207ENST00000622698 N4BP2L2Q92802 583 aaPredicted RBP11.21□□□□□ -0.62
PCDH11Y-207ENST00000622698 MCCC1Q96RQ3 725 aaPredicted RBP11.21□□□□□ -0.62
PCDH11Y-207ENST00000622698 FMO2Q99518 471 aa11.21□□□□□ -0.62
PCDH11Y-207ENST00000622698 SMOC2Q9H3U7 446 aa11.21□□□□□ -0.62
PCDH11Y-207ENST00000622698 SIX4Q9UIU6 781 aa11.21□□□□□ -0.62
PCDH11Y-207ENST00000622698 PCDHA3Q9Y5H8 950 aa11.21□□□□□ -0.62
PCDH11Y-207ENST00000622698 CDK5RAP2Q96SN8 1893 aa11.21□□□□□ -0.62
PCDH11Y-207ENST00000622698 NDUFS3O75489 264 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 ADH5P11766 374 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 AKT1P31749 480 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 ARSEP51690 589 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 JAM2P57087 298 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 GUCY2DQ02846 1103 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 ADGRF1Q5T601 910 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 KLHDC10Q6PID8 442 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 AHI1Q8N157 1196 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 ARL14EPQ8N8R7 260 aaPredicted RBP11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 PNKPQ96T60 521 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 PRDM12Q9H4Q4 367 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 CACYBPQ9HB71 228 aaKnown RBP11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 RNF19AQ9NV58 838 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 RBM22Q9NW64 420 aaKnown RBP eCLIP11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 KCNU1A8MYU2 1149 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 APOC4-APOC2K7ER74 178 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 ENC1O14682 589 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 APOC2P02655 101 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 SERPINB9P50453 376 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 LYPLAL1Q5VWZ2 237 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 GRASPQ7Z6J2 395 aaPredicted RBP11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 RABEPKQ7Z6M1 372 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 XYLT1Q86Y38 959 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 OR6P1Q8NGX9 317 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 ZNF599Q96NL3 588 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 HINFPQ9BQA5 517 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 ZBP1Q9H171 429 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 OSBPL2Q9H1P3 480 aa11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 APOBEC3GQ9HC16 384 aaKnown RBP11.2□□□□□ -0.62
PCDH11Y-207ENST00000622698 AMACRQ9UHK6 382 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms