RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 I3L4J1 428 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 USP12O75317 370 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 ALDH1A2O94788 518 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 STK10O94804 968 aaKnown RBP12.31□□□□□ -0.44
TP53-227ENST00000622645 USP17L7P0C7H9 530 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 MLNP12872 115 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 CRHR1P34998 444 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 ADRA1BP35368 520 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 GLUD2P49448 558 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 DPYSQ14117 519 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 PDK1Q15118 436 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 FSCN1Q16658 493 aaKnown RBP12.31□□□□□ -0.44
TP53-227ENST00000622645 HSF5Q4G112 596 aaPredicted RBP12.31□□□□□ -0.44
TP53-227ENST00000622645 C16orf46Q6P387 395 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 PID1Q7Z2X4 250 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 HACE1Q8IYU2 909 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 C3orf58Q8NDZ4 430 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 STKLD1Q8NE28 680 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 NSMCE1Q8WV22 266 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 TSPAN18Q96SJ8 248 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 SMOQ99835 787 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 TACO1Q9BSH4 297 aaKnown RBP12.31□□□□□ -0.44
TP53-227ENST00000622645 CXorf56Q9H5V9 222 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 SYBUQ9NX95 663 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 MIOSQ9NXC5 875 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 NKX1-2Q9UD57 310 aaPredicted RBP12.31□□□□□ -0.44
TP53-227ENST00000622645 MYADML2A6NDP7 307 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 DIAPH2O60879 1101 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 AP1G2O75843 785 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 ALDOAP04075 364 aaKnown RBP12.31□□□□□ -0.44
TP53-227ENST00000622645 NCAM1P13591 858 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 ERCC2P18074 760 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 SERPINB9P50453 376 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 PURAQ00577 322 aaKnown RBP12.31□□□□□ -0.44
TP53-227ENST00000622645 CRYMQ14894 314 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 STEAP4Q687X5 459 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 ZMIZ2Q8NF64 920 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 PAAF1Q9BRP4 392 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 RHOBTB2Q9BYZ6 727 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 NMUR2Q9GZQ4 415 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 WDR6Q9NNW5 1121 aaKnown RBP12.31□□□□□ -0.44
TP53-227ENST00000622645 NOP53Q9NZM5 478 aaKnown RBP12.31□□□□□ -0.44
TP53-227ENST00000622645 LNPEPQ9UIQ6 1025 aa12.31□□□□□ -0.44
TP53-227ENST00000622645 PDCD11Q14690 1871 aaKnown RBP12.31□□□□□ -0.44
TP53-227ENST00000622645 BRCA2P51587 3418 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 DCLK1O15075 740 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 DNAJC6O75061 913 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 IL1BP01584 269 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 CTSHP09668 335 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 DAOAP59103 153 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 FKBP1BP68106 108 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 OCRLQ01968 901 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 NIPAL4Q0D2K0 466 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 PAFAH1B3Q15102 231 aaKnown RBP12.3□□□□□ -0.44
TP53-227ENST00000622645 TEX44Q53QW1 395 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 PACS1Q6VY07 963 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 CYS1Q717R9 158 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 EDEM1Q92611 657 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 N4BP2L2Q92802 583 aaPredicted RBP12.3□□□□□ -0.44
TP53-227ENST00000622645 APBB2Q92870 758 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 PTCD3Q96EY7 689 aaKnown RBP12.3□□□□□ -0.44
TP53-227ENST00000622645 C7orf26Q96N11 449 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 SYT15Q9BQS2 421 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 CADM1Q9BY67 442 aaKnown RBP12.3□□□□□ -0.44
TP53-227ENST00000622645 MKS1Q9NXB0 559 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 ST3GAL5Q9UNP4 418 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 C15orf41Q9Y2V0 281 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 FCHO1O14526 889 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 TPP1O14773 563 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 PPP1R12AO14974 1030 aaPredicted RBP12.3□□□□□ -0.44
TP53-227ENST00000622645 ENTPD5O75356 428 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 BPGMP07738 259 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 F7P08709 466 aaPredicted RBP12.3□□□□□ -0.44
TP53-227ENST00000622645 ERVK-10P10266 1014 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 GMPRP36959 345 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 IFRD2Q12894 506 aaPredicted RBP12.3□□□□□ -0.44
TP53-227ENST00000622645 GPR162Q16538 588 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 ATG16L1Q676U5 607 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 FAM35AQ86V20 835 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 NPWQ8N729 165 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 NSL1Q96IY1 281 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 DENND2DQ9H6A0 471 aaPredicted RBP12.3□□□□□ -0.44
TP53-227ENST00000622645 FAM105AQ9NUU6 356 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 KLHL8Q9P2G9 620 aaPredicted RBP12.3□□□□□ -0.44
TP53-227ENST00000622645 SNX10Q9Y5X0 201 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 CDY2AQ9Y6F7 541 aa12.3□□□□□ -0.44
TP53-227ENST00000622645 ZNF638Q14966 1978 aaKnown RBP12.3□□□□□ -0.44
TP53-227ENST00000622645 CASTOR2A6NHX0 329 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 CCDC22O60826 627 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 PEX11AO75192 247 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 GSRP00390 522 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 C6orf222P0C671 652 aaPredicted RBP12.29□□□□□ -0.44
TP53-227ENST00000622645 PGAM1P18669 254 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 ELF1P32519 619 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 RFWD3Q6PCD5 774 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 TIFABQ6ZNK6 161 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 MARK2Q7KZI7 788 aaKnown RBP12.29□□□□□ -0.44
TP53-227ENST00000622645 OR52K1Q8NGK4 314 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 TTC8Q8TAM2 541 aa12.29□□□□□ -0.44
TP53-227ENST00000622645 KCNV2Q8TDN2 545 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms