RNA–Protein interactions for RNA: ENST00000622320.4

RRP12-215, Transcript of ribosomal RNA processing 12 homolog, human

TSL 4

Gene RRP12, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RRP12-215	ENST00000622320	NOC3L	Q8WTT2	800 aa	Known RBP	10.8	□□□□□ -0.68
RRP12-215	ENST00000622320	IPO9	Q96P70	1041 aa	Known RBP	10.8	□□□□□ -0.68
RRP12-215	ENST00000622320	GZF1	Q9H116	711 aa	Predicted RBP	10.8	□□□□□ -0.68
RRP12-215	ENST00000622320	KCTD10	Q9H3F6	313 aa		10.8	□□□□□ -0.68
RRP12-215	ENST00000622320	CYLD	Q9NQC7	956 aa		10.8	□□□□□ -0.68
RRP12-215	ENST00000622320	AGPAT3	Q9NRZ7	376 aa		10.8	□□□□□ -0.68
RRP12-215	ENST00000622320	EXOC1	Q9NV70	894 aa		10.8	□□□□□ -0.68
RRP12-215	ENST00000622320	INTS13	Q9NVM9	706 aa		10.8	□□□□□ -0.68
RRP12-215	ENST00000622320	DMAC2	Q9NW81	257 aa		10.8	□□□□□ -0.68
RRP12-215	ENST00000622320	NYNRIN	Q9P2P1	1898 aa	Known RBP	10.8	□□□□□ -0.68
RRP12-215	ENST00000622320	NOTCH2	Q04721	2471 aa		10.8	□□□□□ -0.68
RRP12-215	ENST00000622320	TLN1	Q9Y490	2541 aa	Known RBP	10.8	□□□□□ -0.68
RRP12-215	ENST00000622320	BOD1L1	Q8NFC6	3051 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	COL27A1	Q8IZC6	1860 aa	Predicted RBP	10.79	□□□□□ -0.68
RRP12-215	ENST00000622320		A0A1W2PR77	199 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	ENO4	A6NNW6	628 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	PDXK	O00764	312 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	MDM4	O15151	490 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	CS	O75390	466 aa	Known RBP	10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	TACC1	O75410	805 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	TNNC2	P02585	160 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	ATP5C1	P36542	298 aa	Known RBP	10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	SKOR1	P84550	965 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	DAB2	P98082	770 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	TLE1	Q04724	770 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	SERINC3	Q13530	473 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	NFIL3	Q16649	462 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	ZSCAN23	Q3MJ62	389 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	C4orf17	Q53FE4	359 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	C3orf38	Q5JPI3	329 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	CDCP2	Q5VXM1	449 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	TMEM215	Q68D42	235 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	IGF2-AS	Q6U949	168 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	SLC9A9	Q8IVB4	645 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	GUF1	Q8N442	669 aa	Known RBP	10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	CCDC97	Q96F63	343 aa	Predicted RBP	10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	SMARCD1	Q96GM5	515 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	CCDC34	Q96HJ3	373 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	GSDMA	Q96QA5	445 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	TMEM245	Q9H330	911 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	EBF2	Q9HAK2	575 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	KIAA1586	Q9HCI6	787 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	TLR8	Q9NR97	1041 aa	Known RBP	10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	KRT82	Q9NSB4	513 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	COMMD8	Q9NX08	183 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	HSPBP1	Q9NZL4	362 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	SEPT3	Q9UH03	358 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320	TRAF3IP3	Q9Y228	551 aa		10.79	□□□□□ -0.68
RRP12-215	ENST00000622320		A8MXQ7	604 aa		10.78	□□□□□ -0.68
RRP12-215	ENST00000622320	WNT9A	O14904	365 aa		10.78	□□□□□ -0.68
RRP12-215	ENST00000622320	SIGLEC6	O43699	453 aa		10.78	□□□□□ -0.68
RRP12-215	ENST00000622320	OPA1	O60313	960 aa		10.78	□□□□□ -0.68
RRP12-215	ENST00000622320	SDC3	O75056	442 aa		10.78	□□□□□ -0.68
RRP12-215	ENST00000622320	STC2	O76061	302 aa		10.78	□□□□□ -0.68
RRP12-215	ENST00000622320	RXRG	P48443	463 aa		10.78	□□□□□ -0.68
RRP12-215	ENST00000622320	UBE2H	P62256	183 aa		10.78	□□□□□ -0.68
RRP12-215	ENST00000622320	PNOC	Q13519	176 aa		10.78	□□□□□ -0.68
RRP12-215	ENST00000622320	LINC00303	Q3SY05	128 aa		10.78	□□□□□ -0.68
RRP12-215	ENST00000622320	ZNF776	Q68DI1	518 aa	Predicted RBP	10.78	□□□□□ -0.68
RRP12-215	ENST00000622320	NCEH1	Q6PIU2	408 aa		10.78	□□□□□ -0.68
RRP12-215	ENST00000622320	GOLGA5	Q8TBA6	731 aa		10.78	□□□□□ -0.68
RRP12-215	ENST00000622320	CYB5D2	Q8WUJ1	264 aa		10.78	□□□□□ -0.68
RRP12-215	ENST00000622320	MED10	Q9BTT4	135 aa		10.78	□□□□□ -0.68
RRP12-215	ENST00000622320	PCIF1	Q9H4Z3	704 aa		10.78	□□□□□ -0.68
RRP12-215	ENST00000622320	ERVMER34-1	Q9H9K5	563 aa		10.78	□□□□□ -0.68
RRP12-215	ENST00000622320	OSER1	Q9NX31	292 aa		10.78	□□□□□ -0.68
RRP12-215	ENST00000622320	CLEC4E	Q9ULY5	219 aa		10.78	□□□□□ -0.68
RRP12-215	ENST00000622320	SATB2	Q9UPW6	733 aa		10.78	□□□□□ -0.68
RRP12-215	ENST00000622320	USP9Y	O00507	2555 aa	Predicted RBP	10.77	□□□□□ -0.68
RRP12-215	ENST00000622320	ZNF233	A6NK53	670 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	TRIM38	O00635	465 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	CLIC2	O15247	247 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	CYP26A1	O43174	497 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	AP1G2	O75843	785 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	KIF20A	O95235	890 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	ITGB6	P18564	788 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	RBMS1	P29558	406 aa	Known RBP	10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	CHKA	P35790	457 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	GALC	P54803	685 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	TNNC1	P63316	161 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	CLDN10	P78369	228 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	CLN3	Q13286	438 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	KCNJ12	Q14500	433 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	SURF1	Q15526	300 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	SNRNP35	Q16560	246 aa	Known RBP	10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	ZCWPW2	Q504Y3	356 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	SGO2	Q562F6	1265 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	SLC45A4	Q5BKX6	768 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	XKR5	Q6UX68	686 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	USP30	Q70CQ3	517 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	CBWD2	Q8IUF1	395 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	NELFCD	Q8IXH7	590 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	XXYLT1	Q8NBI6	393 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	GANC	Q8TET4	914 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	GOLGA1	Q92805	767 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	CCDC47	Q96A33	483 aa	Known RBP	10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	ARHGAP9	Q9BRR9	750 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	PABPC3	Q9H361	631 aa	Known RBP	10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	FBXO44	Q9H4M3	255 aa		10.77	□□□□□ -0.69
RRP12-215	ENST00000622320	PRSS16	Q9NQE7	514 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms