RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 UPF1Q92900 1129 aaKnown RBP eCLIP9.7□□□□□ -0.86
PDPN-212ENST00000621990 ISL2Q96A47 359 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 GORASP1Q9BQQ3 440 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 SIKE1Q9BRV8 207 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 CADM1Q9BY67 442 aaKnown RBP9.7□□□□□ -0.86
PDPN-212ENST00000621990 MMADHCQ9H3L0 296 aaPredicted RBP9.7□□□□□ -0.86
PDPN-212ENST00000621990 PRDM12Q9H4Q4 367 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 LRRC4Q9HBW1 653 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 CRTAC1Q9NQ79 661 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 TMPRSS4Q9NRS4 437 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 DNAH12Q6ZR08 3092 aa9.7□□□□□ -0.86
PDPN-212ENST00000621990 MYO18AQ92614 2054 aaKnown RBP9.7□□□□□ -0.86
PDPN-212ENST00000621990 FAM200BP0CF97 657 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 NEFHP12036 1026 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 PSMB4P28070 264 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 TKTL1P51854 596 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 TMPRSS15P98073 1019 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 DEUP1Q05D60 604 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 AP1B1Q10567 949 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 CHI3L2Q15782 390 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 NUDCD3Q8IVD9 361 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 UNC5BQ8IZJ1 945 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 CDKL2Q92772 493 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 PRR11Q96HE9 360 aaPredicted RBP9.69□□□□□ -0.86
PDPN-212ENST00000621990 DENND2DQ9H6A0 471 aaPredicted RBP9.69□□□□□ -0.86
PDPN-212ENST00000621990 CNGB3Q9NQW8 809 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 SLC38A7Q9NVC3 462 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 NKX1-2Q9UD57 310 aaPredicted RBP9.69□□□□□ -0.86
PDPN-212ENST00000621990 EMCNQ9ULC0 261 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 I6L893 689 aaPredicted RBP9.69□□□□□ -0.86
PDPN-212ENST00000621990 EEF2KO00418 725 aaKnown RBP9.69□□□□□ -0.86
PDPN-212ENST00000621990 FCHO1O14526 889 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 NRP1O14786 923 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 NCAM2O15394 837 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 TPBGLP0DKB5 382 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 RARBP10826 455 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 GNAT1P11488 350 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 ACAT1P24752 427 aaKnown RBP9.69□□□□□ -0.86
PDPN-212ENST00000621990 MGAT1P26572 445 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 ELF1P32519 619 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 MAGEA12P43365 314 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 LHX1P48742 406 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 DAOAP59103 153 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 MDH1BQ5I0G3 518 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 INTS6LQ5JSJ4 861 aaKnown RBP9.69□□□□□ -0.86
PDPN-212ENST00000621990 MBLAC2Q68D91 279 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 TAF2Q6P1X5 1199 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 C4orf50Q6ZRC1 276 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 HFE2Q6ZVN8 426 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 BHLHA9Q7RTU4 235 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 ZFP42Q96MM3 310 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 C20orf27Q9GZN8 174 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 NMUR2Q9GZQ4 415 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 BRD8Q9H0E9 1235 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 TSPYL2Q9H2G4 693 aaPredicted RBP9.69□□□□□ -0.86
PDPN-212ENST00000621990 ANLNQ9NQW6 1124 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 KRT82Q9NSB4 513 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 THAP1Q9NVV9 213 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 FBXW11Q9UKB1 542 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 HBS1LQ9Y450 684 aaKnown RBP9.69□□□□□ -0.86
PDPN-212ENST00000621990 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.69□□□□□ -0.86
PDPN-212ENST00000621990 GSC2O15499 205 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 IGFBP6P24592 240 aaPredicted RBP9.69□□□□□ -0.86
PDPN-212ENST00000621990 ZNF135P52742 658 aaPredicted RBP9.69□□□□□ -0.86
PDPN-212ENST00000621990 CRADDP78560 199 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 PURAQ00577 322 aaKnown RBP9.69□□□□□ -0.86
PDPN-212ENST00000621990 PPIDQ08752 370 aaKnown RBP9.69□□□□□ -0.86
PDPN-212ENST00000621990 PDE1CQ14123 709 aaPredicted RBP9.69□□□□□ -0.86
PDPN-212ENST00000621990 INSCQ1MX18 579 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 KCTD11Q693B1 232 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 TWF2Q6IBS0 349 aaKnown RBP9.69□□□□□ -0.86
PDPN-212ENST00000621990 ZMIZ2Q8NF64 920 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 SENP8Q96LD8 212 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 SMOQ99835 787 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 WWP1Q9H0M0 922 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 XPNPEP3Q9NQH7 507 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 SYBUQ9NX95 663 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 DDX43Q9NXZ2 648 aaKnown RBP9.69□□□□□ -0.86
PDPN-212ENST00000621990 RRN3Q9NYV6 651 aa9.69□□□□□ -0.86
PDPN-212ENST00000621990 FNDC1Q4ZHG4 1894 aaPredicted RBP9.68□□□□□ -0.86
PDPN-212ENST00000621990 C2orf71A6NGG8 1288 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 YJEFN3A6XGL0 299 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 HHLA1C9JL84 531 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 FAM72CH0Y354 149 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 CREB3O43889 395 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 GLRA3O75311 464 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 AP2A1O95782 977 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 PRKCGP05129 697 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 ITGA2BP08514 1039 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 MYL3P08590 195 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 PTPN3P26045 913 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 MAP3K7CLP57077 242 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 ZBTB16Q05516 673 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 NME3Q13232 169 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 TBCCQ15814 346 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 SPANXN3Q5MJ09 141 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 FAM72AQ5TYM5 149 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 FAM72DQ6L9T8 149 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 CASC4Q6P4E1 433 aa9.68□□□□□ -0.86
PDPN-212ENST00000621990 PAXIP1Q6ZW49 1069 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms