RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 KLF10Q13118 480 aa20.11■□□□□ 0.81
PDLIM3-212ENST00000620787 PRICKLE1Q96MT3 831 aaPredicted RBP20.11■□□□□ 0.81
PDLIM3-212ENST00000620787 RTKNQ9BST9 563 aa20.11■□□□□ 0.81
PDLIM3-212ENST00000620787 OXCT2Q9BYC2 517 aaPredicted RBP20.11■□□□□ 0.81
PDLIM3-212ENST00000620787 MAGEB5Q9BZ81 275 aa20.11■□□□□ 0.81
PDLIM3-212ENST00000620787 INO80BQ9C086 356 aaPredicted RBP20.11■□□□□ 0.81
PDLIM3-212ENST00000620787 MORF4L1Q9UBU8 362 aa20.11■□□□□ 0.81
PDLIM3-212ENST00000620787 DENRO43583 198 aaKnown RBP20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 CREB3O43889 395 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 PTPRAP18433 802 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 NAB1Q13506 487 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 TBC1D25Q3MII6 688 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 EPGNQ6UW88 154 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 NIM1KQ8IY84 436 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 PQLC1Q8N2U9 271 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 ARNTL2Q8WYA1 636 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 NMD3Q96D46 503 aaKnown RBP20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 DCUN1D1Q96GG9 259 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 FAM167AQ96KS9 214 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 MINDY3Q9H8M7 445 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 ZNF358Q9NW07 568 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 PIH1D1Q9NWS0 290 aaKnown RBP20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 PSMD13Q9UNM6 376 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 PCDHB12Q9Y5F1 795 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 GAS2O43903 313 aaKnown RBP20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 PENKP01210 267 aaPredicted RBP20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 SLC6A3Q01959 620 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 USP4Q13107 963 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 R3HDM1Q15032 1099 aaKnown RBP20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 DPYSL2Q16555 572 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 GOLGA7BQ2TAP0 167 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 FSCBQ5H9T9 825 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 HEATR6Q6AI08 1181 aaKnown RBP20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 PMF1Q6P1K2 205 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 CATSPERGQ6ZRH7 1159 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 C12orf29Q8N999 325 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 SEPT1Q8WYJ6 367 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 HPDLQ96IR7 371 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 COG4Q9H9E3 785 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 AS3MTQ9HBK9 375 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 HESX1Q9UBX0 185 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 PHF24Q9UPV7 400 aa20.1■□□□□ 0.81
PDLIM3-212ENST00000620787 EVPLQ92817 2033 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 TOMM70O94826 608 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 FBXO21O94952 628 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 P4HA1P13674 534 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 MGAT1P26572 445 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 SESN2P58004 480 aaPredicted RBP20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 SMAD1Q15797 465 aaKnown RBP20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 SLC9B1Q4ZJI4 515 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 NBPF12Q5TAG4 269 aaPredicted RBP20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 LRRC8BQ6P9F7 803 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 POTEAQ6S8J7 498 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 TRIM50Q86XT4 487 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 JDP2Q8WYK2 163 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 CDH19Q9H159 772 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 MAN1C1Q9NR34 630 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 UBAP1Q9NZ09 502 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 C6orf203Q9P0P8 240 aaPredicted RBP20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 TNFSF13BQ9Y275 285 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 MFHAS1Q9Y4C4 1052 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 E9PBE3 544 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 VILLO15195 856 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 KLHL41O60662 606 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 APBA3O96018 575 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 STAG3L1P0CL83 205 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 CPA3P15088 417 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 PGAM1P18669 254 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 NR2C2P49116 596 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 MBTD1Q05BQ5 628 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 TTLL12Q14166 644 aaPredicted RBP20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 ZNF781Q8N8C0 355 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 DGCR14Q96DF8 476 aaKnown RBP20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 MPP4Q96JB8 637 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 MAF1Q9H063 256 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 DHX35Q9H5Z1 703 aaKnown RBP20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 DTLQ9NZJ0 730 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 A0A0G2JMZ2 1700 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 LRRC37A2A6NM11 1700 aa20.09■□□□□ 0.81
PDLIM3-212ENST00000620787 ZNF638Q14966 1978 aaKnown RBP20.08■□□□□ 0.81
PDLIM3-212ENST00000620787 E2F8A0AVK6 867 aa20.08■□□□□ 0.81
PDLIM3-212ENST00000620787 SPDYE16A6NNV3 312 aaPredicted RBP20.08■□□□□ 0.81
PDLIM3-212ENST00000620787 DNAJA2O60884 412 aa20.08■□□□□ 0.81
PDLIM3-212ENST00000620787 ASLP04424 464 aa20.08■□□□□ 0.81
PDLIM3-212ENST00000620787 TFAP2AP05549 437 aa20.08■□□□□ 0.81
PDLIM3-212ENST00000620787 IQCF3P0C7M6 154 aa20.08■□□□□ 0.81
PDLIM3-212ENST00000620787 CD1EP15812 388 aa20.08■□□□□ 0.81
PDLIM3-212ENST00000620787 ZFXP17010 805 aaPredicted RBP20.08■□□□□ 0.81
PDLIM3-212ENST00000620787 MX2P20592 715 aa20.08■□□□□ 0.81
PDLIM3-212ENST00000620787 PMLP29590 882 aa20.08■□□□□ 0.81
PDLIM3-212ENST00000620787 RGS2P41220 211 aa20.08■□□□□ 0.81
PDLIM3-212ENST00000620787 NUMBP49757 651 aa20.08■□□□□ 0.81
PDLIM3-212ENST00000620787 ATXN1P54253 815 aaKnown RBP20.08■□□□□ 0.81
PDLIM3-212ENST00000620787 MAP7Q14244 749 aa20.08■□□□□ 0.81
PDLIM3-212ENST00000620787 MAPK15Q8TD08 544 aa20.08■□□□□ 0.81
PDLIM3-212ENST00000620787 PACSIN3Q9UKS6 424 aa20.08■□□□□ 0.81
PDLIM3-212ENST00000620787 A0A0A0MRY4 1105 aa20.08■□□□□ 0.8
PDLIM3-212ENST00000620787 GABBR2O75899 941 aa20.08■□□□□ 0.8
PDLIM3-212ENST00000620787 TYK2P29597 1187 aa20.08■□□□□ 0.8
PDLIM3-212ENST00000620787 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms