RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 DDX50Q9BQ39 737 aaKnown RBP17.8■□□□□ 0.44
HMGN3-203ENST00000620514 TRIM62Q9BVG3 475 aa17.8■□□□□ 0.44
HMGN3-203ENST00000620514 IRX2Q9BZI1 471 aaPredicted RBP17.8■□□□□ 0.44
HMGN3-203ENST00000620514 LHX5Q9H2C1 402 aa17.8■□□□□ 0.44
HMGN3-203ENST00000620514 TMEM245Q9H330 911 aa17.8■□□□□ 0.44
HMGN3-203ENST00000620514 TMEM9BQ9NQ34 198 aa17.8■□□□□ 0.44
HMGN3-203ENST00000620514 ITM2CQ9NQX7 267 aa17.8■□□□□ 0.44
HMGN3-203ENST00000620514 FHOD1Q9Y613 1164 aa17.8■□□□□ 0.44
HMGN3-203ENST00000620514 SYNJ2BP-COX16A0A087WUM0 186 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 FAM170AA1A519 330 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 NDUFS2O75306 463 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 APOEP02649 317 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 ERBB2P04626 1255 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 CFIP05156 583 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 ENGP17813 658 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 CD6P30203 668 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 KRT9P35527 623 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 TPMTP51580 245 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 EIF4EBP2Q13542 120 aaPredicted RBP17.79■□□□□ 0.44
HMGN3-203ENST00000620514 RAPGEF1Q13905 1077 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 DRAP1Q14919 205 aaPredicted RBP17.79■□□□□ 0.44
HMGN3-203ENST00000620514 PTPN20Q4JDL3 420 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 TCP11X2Q5H9J9 407 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 FSCBQ5H9T9 825 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 KLHDC7AQ5VTJ3 777 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 OR6B2Q6IFH4 312 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 SLC23A3Q6PIS1 610 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 MMS22LQ6ZRQ5 1243 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 LGI2Q8N0V4 545 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 CARNMT1Q8N4J0 409 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 OR2T3Q8NH03 318 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 FIBINQ8TAL6 211 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 PRCCQ92733 491 aaPredicted RBP17.79■□□□□ 0.44
HMGN3-203ENST00000620514 TOE1Q96GM8 510 aaKnown RBP17.79■□□□□ 0.44
HMGN3-203ENST00000620514 ZNF419Q96HQ0 510 aaPredicted RBP17.79■□□□□ 0.44
HMGN3-203ENST00000620514 SLC2A13Q96QE2 648 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 NUSAP1Q9BXS6 441 aaKnown RBP17.79■□□□□ 0.44
HMGN3-203ENST00000620514 MTG2Q9H4K7 406 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 TAB2Q9NYJ8 693 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 WSB2Q9NYS7 404 aaPredicted RBP17.79■□□□□ 0.44
HMGN3-203ENST00000620514 COX16Q9P0S2 106 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 INTS6Q9UL03 887 aaKnown RBP17.79■□□□□ 0.44
HMGN3-203ENST00000620514 PLA2G4CQ9UP65 541 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 NFE2L3Q9Y4A8 694 aa17.79■□□□□ 0.44
HMGN3-203ENST00000620514 LAMA1P25391 3075 aa17.78■□□□□ 0.44
HMGN3-203ENST00000620514 KCNK5O95279 499 aa17.78■□□□□ 0.44
HMGN3-203ENST00000620514 DLDP09622 509 aaKnown RBP17.78■□□□□ 0.44
HMGN3-203ENST00000620514 POLR2EP19388 210 aaKnown RBP17.78■□□□□ 0.44
HMGN3-203ENST00000620514 TACR2P21452 398 aa17.78■□□□□ 0.44
HMGN3-203ENST00000620514 MAOBP27338 520 aa17.78■□□□□ 0.44
HMGN3-203ENST00000620514 DPP6P42658 865 aa17.78■□□□□ 0.44
HMGN3-203ENST00000620514 MAPK8P45983 427 aa17.78■□□□□ 0.44
HMGN3-203ENST00000620514 CAMK2GQ13555 558 aaPredicted RBP17.78■□□□□ 0.44
HMGN3-203ENST00000620514 DUOXA1Q1HG43 343 aa17.78■□□□□ 0.44
HMGN3-203ENST00000620514 UAP1L1Q3KQV9 507 aa17.78■□□□□ 0.44
HMGN3-203ENST00000620514 N4BP2L1Q5TBK1 243 aaPredicted RBP17.78■□□□□ 0.44
HMGN3-203ENST00000620514 OLFML1Q6UWY5 402 aa17.78■□□□□ 0.44
HMGN3-203ENST00000620514 C11orf57Q6ZUT1 292 aaPredicted RBP17.78■□□□□ 0.44
HMGN3-203ENST00000620514 CHSY1Q86X52 802 aa17.78■□□□□ 0.44
HMGN3-203ENST00000620514 GPR174Q9BXC1 333 aa17.78■□□□□ 0.44
HMGN3-203ENST00000620514 FAM204AQ9H8W3 233 aa17.78■□□□□ 0.44
HMGN3-203ENST00000620514 ASNSD1Q9NWL6 643 aa17.78■□□□□ 0.44
HMGN3-203ENST00000620514 PI4KAP42356 2102 aa17.77■□□□□ 0.44
HMGN3-203ENST00000620514 TYW5A2RUC4 315 aaKnown RBP17.77■□□□□ 0.44
HMGN3-203ENST00000620514 GIPC1O14908 333 aa17.77■□□□□ 0.44
HMGN3-203ENST00000620514 HSF2BPO75031 334 aa17.77■□□□□ 0.44
HMGN3-203ENST00000620514 LUC7L3O95232 432 aaKnown RBP17.77■□□□□ 0.44
HMGN3-203ENST00000620514 ATP5BP06576 529 aaKnown RBP17.77■□□□□ 0.44
HMGN3-203ENST00000620514 GLI1P08151 1106 aa17.77■□□□□ 0.44
HMGN3-203ENST00000620514 HOXD12P35452 270 aa17.77■□□□□ 0.44
HMGN3-203ENST00000620514 CSKP41240 450 aa17.77■□□□□ 0.44
HMGN3-203ENST00000620514 CDK17Q00537 523 aa17.77■□□□□ 0.44
HMGN3-203ENST00000620514 CT47A1Q5JQC4 288 aaPredicted RBP17.77■□□□□ 0.44
HMGN3-203ENST00000620514 EFHC1Q5JVL4 640 aa17.77■□□□□ 0.44
HMGN3-203ENST00000620514 DAB2IPQ5VWQ8 1189 aa17.77■□□□□ 0.44
HMGN3-203ENST00000620514 SMYD5Q6GMV2 418 aa17.77■□□□□ 0.44
HMGN3-203ENST00000620514 PSAPL1Q6NUJ1 521 aa17.77■□□□□ 0.44
HMGN3-203ENST00000620514 RGL4Q8IZJ4 473 aa17.77■□□□□ 0.44
HMGN3-203ENST00000620514 ENOX1Q8TC92 643 aaKnown RBP17.77■□□□□ 0.44
HMGN3-203ENST00000620514 TTC17Q96AE7 1141 aa17.77■□□□□ 0.44
HMGN3-203ENST00000620514 MYO19Q96H55 970 aa17.77■□□□□ 0.44
HMGN3-203ENST00000620514 BTN2A3PQ96KV6 586 aa17.77■□□□□ 0.44
HMGN3-203ENST00000620514 NOX5Q96PH1 765 aa17.77■□□□□ 0.44
HMGN3-203ENST00000620514 NAA15Q9BXJ9 866 aaKnown RBP17.77■□□□□ 0.44
HMGN3-203ENST00000620514 CAPN10Q9HC96 672 aa17.77■□□□□ 0.44
HMGN3-203ENST00000620514 PRSS16Q9NQE7 514 aa17.77■□□□□ 0.44
HMGN3-203ENST00000620514 DDIT4Q9NX09 232 aa17.77■□□□□ 0.44
HMGN3-203ENST00000620514 SLC6A14Q9UN76 642 aa17.77■□□□□ 0.44
HMGN3-203ENST00000620514 KCNU1A8MYU2 1149 aa17.76■□□□□ 0.43
HMGN3-203ENST00000620514 SERPINF2P08697 491 aa17.76■□□□□ 0.43
HMGN3-203ENST00000620514 ACADMP11310 421 aa17.76■□□□□ 0.43
HMGN3-203ENST00000620514 UCHL3P15374 230 aa17.76■□□□□ 0.43
HMGN3-203ENST00000620514 CYP11B1P15538 503 aa17.76■□□□□ 0.43
HMGN3-203ENST00000620514 EEF1GP26641 437 aaKnown RBP17.76■□□□□ 0.43
HMGN3-203ENST00000620514 CTSOP43234 321 aaPredicted RBP17.76■□□□□ 0.43
HMGN3-203ENST00000620514 BPIFB4P59827 614 aa17.76■□□□□ 0.43
HMGN3-203ENST00000620514 SLC6A3Q01959 620 aa17.76■□□□□ 0.43
HMGN3-203ENST00000620514 CDH18Q13634 790 aa17.76■□□□□ 0.43
HMGN3-203ENST00000620514 PITRM1Q5JRX3 1037 aa17.76■□□□□ 0.43
HMGN3-203ENST00000620514 TAF3Q5VWG9 929 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms