RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 OR12D3Q9UGF7 316 aa12.77□□□□□ -0.36
CIITA-212ENST00000618207 HHLA1C9JL84 531 aa12.77□□□□□ -0.37
CIITA-212ENST00000618207 XRCC4Q13426 336 aa12.77□□□□□ -0.37
CIITA-212ENST00000618207 ARCQ7LC44 396 aa12.77□□□□□ -0.37
CIITA-212ENST00000618207 OTOAQ7RTW8 1153 aa12.77□□□□□ -0.37
CIITA-212ENST00000618207 TAC4Q86UU9 113 aa12.77□□□□□ -0.37
CIITA-212ENST00000618207 CEP57Q86XR8 500 aa12.77□□□□□ -0.37
CIITA-212ENST00000618207 B3GALT6Q96L58 329 aa12.77□□□□□ -0.37
CIITA-212ENST00000618207 EBNA1BP2Q99848 306 aaKnown RBP12.77□□□□□ -0.37
CIITA-212ENST00000618207 CNGB3Q9NQW8 809 aa12.77□□□□□ -0.37
CIITA-212ENST00000618207 ABI2Q9NYB9 513 aaPredicted RBP12.77□□□□□ -0.37
CIITA-212ENST00000618207 TRPA1O75762 1119 aa12.76□□□□□ -0.37
CIITA-212ENST00000618207 ABCG1P45844 678 aa12.76□□□□□ -0.37
CIITA-212ENST00000618207 OR1G1P47890 313 aa12.76□□□□□ -0.37
CIITA-212ENST00000618207 ARPP19P56211 112 aa12.76□□□□□ -0.37
CIITA-212ENST00000618207 WASHC5Q12768 1159 aa12.76□□□□□ -0.37
CIITA-212ENST00000618207 OR52K1Q8NGK4 314 aa12.76□□□□□ -0.37
CIITA-212ENST00000618207 ACTR5Q9H9F9 607 aaPredicted RBP12.76□□□□□ -0.37
CIITA-212ENST00000618207 PDE4DIPQ5VU43 2346 aa12.76□□□□□ -0.37
CIITA-212ENST00000618207 C2orf71A6NGG8 1288 aa12.76□□□□□ -0.37
CIITA-212ENST00000618207 COPEO14579 308 aa12.76□□□□□ -0.37
CIITA-212ENST00000618207 STK10O94804 968 aaKnown RBP12.76□□□□□ -0.37
CIITA-212ENST00000618207 LRIG2O94898 1065 aa12.76□□□□□ -0.37
CIITA-212ENST00000618207 ZWINTO95229 277 aa12.76□□□□□ -0.37
CIITA-212ENST00000618207 BGNP21810 368 aa12.76□□□□□ -0.37
CIITA-212ENST00000618207 HNRNPH1P31943 449 aaKnown RBP12.76□□□□□ -0.37
CIITA-212ENST00000618207 PDK1Q15118 436 aa12.76□□□□□ -0.37
CIITA-212ENST00000618207 INTS6LQ5JSJ4 861 aaKnown RBP12.76□□□□□ -0.37
CIITA-212ENST00000618207 DNAAF3Q8N9W5 541 aa12.76□□□□□ -0.37
CIITA-212ENST00000618207 RSPH1Q8WYR4 309 aa12.76□□□□□ -0.37
CIITA-212ENST00000618207 ITFG2Q969R8 447 aa12.76□□□□□ -0.37
CIITA-212ENST00000618207 STAMBPL1Q96FJ0 436 aa12.76□□□□□ -0.37
CIITA-212ENST00000618207 TSPAN18Q96SJ8 248 aa12.76□□□□□ -0.37
CIITA-212ENST00000618207 ECT2Q9H8V3 914 aa12.76□□□□□ -0.37
CIITA-212ENST00000618207 FBXW11Q9UKB1 542 aa12.76□□□□□ -0.37
CIITA-212ENST00000618207 STK38LQ9Y2H1 464 aa12.76□□□□□ -0.37
CIITA-212ENST00000618207 A0A0G2JND7 137 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 ATP9BO43861 1147 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 DDHD2O94830 711 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 FBXO21O94952 628 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 TPH1P17752 444 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 TM4SF4P48230 202 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 KCNJ2P63252 427 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 TUSC3Q13454 348 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 SEMA5AQ13591 1074 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 TTC39BQ5VTQ0 682 aaPredicted RBP12.75□□□□□ -0.37
CIITA-212ENST00000618207 CD300LGQ6UXG3 332 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 BZW1Q7L1Q6 419 aaKnown RBP12.75□□□□□ -0.37
CIITA-212ENST00000618207 KDELC2Q7Z4H8 507 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 ZNF513Q8N8E2 541 aaPredicted RBP12.75□□□□□ -0.37
CIITA-212ENST00000618207 ARMC2Q8NEN0 867 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 GSDMBQ8TAX9 411 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 ERP27Q96DN0 273 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 SRPK1Q96SB4 655 aaKnown RBP12.75□□□□□ -0.37
CIITA-212ENST00000618207 PHACTR1Q9C0D0 580 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 SYBUQ9NX95 663 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 GOLGA8TH3BQL2 631 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 DFFAO00273 331 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 DCLK1O15075 740 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 ZBTB24O43167 697 aaPredicted RBP12.75□□□□□ -0.37
CIITA-212ENST00000618207 EDF1O60869 148 aaKnown RBP12.75□□□□□ -0.37
CIITA-212ENST00000618207 KRT37O76014 449 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 C1QAP02745 245 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 SNRPAP09012 282 aaKnown RBP12.75□□□□□ -0.37
CIITA-212ENST00000618207 KCNA4P22459 653 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 RPL9P32969 192 aaKnown RBP12.75□□□□□ -0.37
CIITA-212ENST00000618207 GPR15P49685 360 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 SP3Q02447 781 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 DPYSQ14117 519 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 ARL13BQ3SXY8 428 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 SLC39A12Q504Y0 691 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 ZNF449Q6P9G9 518 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 BHLHA9Q7RTU4 235 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 VSIG1Q86XK7 387 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 CD99L2Q8TCZ2 262 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 UPF3AQ9H1J1 476 aaKnown RBP12.75□□□□□ -0.37
CIITA-212ENST00000618207 MANSC1Q9H8J5 431 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 ZNF395Q9H8N7 513 aaPredicted RBP12.75□□□□□ -0.37
CIITA-212ENST00000618207 PPCSQ9HAB8 311 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 DNAJB4Q9UDY4 337 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 ERVK-10P10266 1014 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 ACLYP53396 1101 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 SARNPP82979 210 aaKnown RBP12.75□□□□□ -0.37
CIITA-212ENST00000618207 YWHAHQ04917 246 aaPredicted RBP12.75□□□□□ -0.37
CIITA-212ENST00000618207 DDR2Q16832 855 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 LACTB2Q53H82 288 aaPredicted RBP12.75□□□□□ -0.37
CIITA-212ENST00000618207 RAB41Q5JT25 222 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 ARHGAP36Q6ZRI8 547 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 RTN4RL1Q86UN2 441 aaPredicted RBP12.75□□□□□ -0.37
CIITA-212ENST00000618207 SPATA2LQ8IUW3 424 aaPredicted RBP12.75□□□□□ -0.37
CIITA-212ENST00000618207 NDUFAF2Q8N183 169 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 DQX1Q8TE96 717 aaKnown RBP12.75□□□□□ -0.37
CIITA-212ENST00000618207 FERMT1Q9BQL6 677 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 DMAP1Q9NPF5 467 aaPredicted RBP12.75□□□□□ -0.37
CIITA-212ENST00000618207 HCSTQ9UBK5 93 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 PSAT1Q9Y617 370 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 PTCH2Q9Y6C5 1203 aa12.75□□□□□ -0.37
CIITA-212ENST00000618207 SPAG6O75602 509 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 SOAT2O75908 522 aa12.74□□□□□ -0.37
CIITA-212ENST00000618207 JCHAINP01591 159 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms