RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 OPHN1O60890 802 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 NR1H3Q13133 447 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 NPAS4Q8IUM7 802 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 ZNF567Q8N184 647 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 NUP93Q8N1F7 819 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 GPR152Q8TDT2 470 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 DEPDC1BQ8WUY9 529 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 CHMP6Q96FZ7 201 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 DHRS4Q9BTZ2 278 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 HIPK3Q9H422 1215 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 TRABDQ9H4I3 376 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 ARHGEF38Q9NXL2 777 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 FETUBQ9UGM5 382 aa17.86■□□□□ 0.45
PCDHGC3-205ENST00000617641 MYO18AQ92614 2054 aaKnown RBP17.85■□□□□ 0.45
PCDHGC3-205ENST00000617641 EBAG9O00559 213 aa17.85■□□□□ 0.45
PCDHGC3-205ENST00000617641 SPAG7O75391 227 aa17.85■□□□□ 0.45
PCDHGC3-205ENST00000617641 SOAT2O75908 522 aa17.85■□□□□ 0.45
PCDHGC3-205ENST00000617641 FDFT1P37268 417 aa17.85■□□□□ 0.45
PCDHGC3-205ENST00000617641 MAGEA3P43357 314 aa17.85■□□□□ 0.45
PCDHGC3-205ENST00000617641 USP46P62068 366 aa17.85■□□□□ 0.45
PCDHGC3-205ENST00000617641 RASA2Q15283 850 aa17.85■□□□□ 0.45
PCDHGC3-205ENST00000617641 ZNF280DQ6N043 979 aa17.85■□□□□ 0.45
PCDHGC3-205ENST00000617641 TMEM173Q86WV6 379 aaPredicted RBP17.85■□□□□ 0.45
PCDHGC3-205ENST00000617641 MPP5Q8N3R9 675 aa17.85■□□□□ 0.45
PCDHGC3-205ENST00000617641 DYDC1Q8WWB3 177 aa17.85■□□□□ 0.45
PCDHGC3-205ENST00000617641 C8orf48Q96LL4 319 aa17.85■□□□□ 0.45
PCDHGC3-205ENST00000617641 ZNF317Q96PQ6 595 aaPredicted RBP17.85■□□□□ 0.45
PCDHGC3-205ENST00000617641 FERMT1Q9BQL6 677 aa17.85■□□□□ 0.45
PCDHGC3-205ENST00000617641 ZC3H7BQ9UGR2 993 aaKnown RBP17.85■□□□□ 0.45
PCDHGC3-205ENST00000617641 A0A1W2PPM1 405 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 SRGAP2BP0DMP2 458 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 DRD4P21917 467 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 FGFR3P22607 806 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 PSMB4P28070 264 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 MSH2P43246 934 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 KBTBD12Q3ZCT8 623 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 FUT10Q6P4F1 479 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 ADGRD1Q6QNK2 874 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 DEFB128Q7Z7B8 93 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 PRPF39Q86UA1 669 aaKnown RBP17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 DCAKDQ8WVC6 231 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 CYTH2Q99418 400 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 OSBPL2Q9H1P3 480 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 PLAC1Q9HBJ0 212 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 SCML2Q9UQR0 700 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 TANC1Q9C0D5 1861 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 OR6C75A6NL08 312 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 TRIM66O15016 1216 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 ZNF135P52742 658 aaPredicted RBP17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 RWDD4Q6NW29 188 aaKnown RBP17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 RSPO2Q6UXX9 243 aaPredicted RBP17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 TAX1BP1Q86VP1 789 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 C4orf33Q8N1A6 199 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 PDCD7Q8N8D1 485 aaKnown RBP17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 GDAP1Q8TB36 358 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 SIGLEC10Q96LC7 697 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 TRIM56Q9BRZ2 755 aaKnown RBP17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 CCDC134Q9H6E4 229 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 TTLL3Q9Y4R7 772 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 RAD54BQ9Y620 910 aa17.84■□□□□ 0.45
PCDHGC3-205ENST00000617641 PAGE1O75459 146 aa17.83■□□□□ 0.45
PCDHGC3-205ENST00000617641 SPAG6O75602 509 aa17.83■□□□□ 0.45
PCDHGC3-205ENST00000617641 CPP00450 1065 aa17.83■□□□□ 0.45
PCDHGC3-205ENST00000617641 GALTP07902 379 aa17.83■□□□□ 0.45
PCDHGC3-205ENST00000617641 CPB1P15086 417 aa17.83■□□□□ 0.45
PCDHGC3-205ENST00000617641 CYP2C18P33260 490 aa17.83■□□□□ 0.45
PCDHGC3-205ENST00000617641 PPIDQ08752 370 aaKnown RBP17.83■□□□□ 0.45
PCDHGC3-205ENST00000617641 BRMS1LQ5PSV4 323 aa17.83■□□□□ 0.45
PCDHGC3-205ENST00000617641 RTP2Q5QGT7 225 aa17.83■□□□□ 0.45
PCDHGC3-205ENST00000617641 CPLX4Q7Z7G2 160 aa17.83■□□□□ 0.45
PCDHGC3-205ENST00000617641 BCL7CQ8WUZ0 217 aaPredicted RBP17.83■□□□□ 0.45
PCDHGC3-205ENST00000617641 CELF6Q96J87 481 aaKnown RBP17.83■□□□□ 0.45
PCDHGC3-205ENST00000617641 NEU3Q9UQ49 428 aa17.83■□□□□ 0.45
PCDHGC3-205ENST00000617641 SLC27A5Q9Y2P5 690 aa17.83■□□□□ 0.45
PCDHGC3-205ENST00000617641 MAD1L1Q9Y6D9 718 aa17.83■□□□□ 0.45
PCDHGC3-205ENST00000617641 HOXA2O43364 376 aa17.83■□□□□ 0.44
PCDHGC3-205ENST00000617641 PTPN3P26045 913 aa17.83■□□□□ 0.44
PCDHGC3-205ENST00000617641 CCR1P32246 355 aa17.83■□□□□ 0.44
PCDHGC3-205ENST00000617641 MAGEA11P43364 429 aa17.83■□□□□ 0.44
PCDHGC3-205ENST00000617641 FAAP100Q0VG06 881 aa17.83■□□□□ 0.44
PCDHGC3-205ENST00000617641 GALNT2Q10471 571 aa17.83■□□□□ 0.44
PCDHGC3-205ENST00000617641 TAS1R1Q7RTX1 841 aa17.83■□□□□ 0.44
PCDHGC3-205ENST00000617641 PID1Q7Z2X4 250 aa17.83■□□□□ 0.44
PCDHGC3-205ENST00000617641 MON1AQ86VX9 555 aa17.83■□□□□ 0.44
PCDHGC3-205ENST00000617641 LRRC34Q8IZ02 419 aa17.83■□□□□ 0.44
PCDHGC3-205ENST00000617641 LRRC39Q96DD0 335 aa17.83■□□□□ 0.44
PCDHGC3-205ENST00000617641 XAB2Q9HCS7 855 aaKnown RBP17.83■□□□□ 0.44
PCDHGC3-205ENST00000617641 NKIRAS1Q9NYS0 192 aa17.83■□□□□ 0.44
PCDHGC3-205ENST00000617641 GMIPQ9P107 970 aa17.83■□□□□ 0.44
PCDHGC3-205ENST00000617641 KLHL8Q9P2G9 620 aaPredicted RBP17.83■□□□□ 0.44
PCDHGC3-205ENST00000617641 PLXNA3P51805 1871 aa17.82■□□□□ 0.44
PCDHGC3-205ENST00000617641 NUP205Q92621 2012 aa17.82■□□□□ 0.44
PCDHGC3-205ENST00000617641 NCAM2O15394 837 aa17.82■□□□□ 0.44
PCDHGC3-205ENST00000617641 MOCS2O96007 188 aaPredicted RBP17.82■□□□□ 0.44
PCDHGC3-205ENST00000617641 CXCL10P02778 98 aa17.82■□□□□ 0.44
PCDHGC3-205ENST00000617641 SERPINB6P35237 376 aa17.82■□□□□ 0.44
PCDHGC3-205ENST00000617641 PARP6Q2NL67 630 aa17.82■□□□□ 0.44
PCDHGC3-205ENST00000617641 SLC39A5Q6ZMH5 540 aa17.82■□□□□ 0.44
PCDHGC3-205ENST00000617641 HAPLN3Q96S86 360 aa17.82■□□□□ 0.44
PCDHGC3-205ENST00000617641 SMC6Q96SB8 1091 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms