RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 MATR3P43243 847 aaKnown RBP eCLIP10.76□□□□□ -0.69
AP003900.1-202ENST00000616952 OVGP1Q12889 678 aa10.76□□□□□ -0.69
AP003900.1-202ENST00000616952 TMEM132DQ14C87 1099 aa10.76□□□□□ -0.69
AP003900.1-202ENST00000616952 SV2CQ496J9 727 aa10.76□□□□□ -0.69
AP003900.1-202ENST00000616952 ZNF776Q68DI1 518 aaPredicted RBP10.76□□□□□ -0.69
AP003900.1-202ENST00000616952 C4orf50Q6ZRC1 276 aa10.76□□□□□ -0.69
AP003900.1-202ENST00000616952 HTR3DQ70Z44 454 aa10.76□□□□□ -0.69
AP003900.1-202ENST00000616952 CCDC83Q8IWF9 413 aa10.76□□□□□ -0.69
AP003900.1-202ENST00000616952 ZNF366Q8N895 744 aa10.76□□□□□ -0.69
AP003900.1-202ENST00000616952 NAP1L4Q99733 375 aaKnown RBP10.76□□□□□ -0.69
AP003900.1-202ENST00000616952 HAPLN2Q9GZV7 340 aa10.76□□□□□ -0.69
AP003900.1-202ENST00000616952 FOXJ2Q9P0K8 574 aa10.76□□□□□ -0.69
AP003900.1-202ENST00000616952 PISDQ9UG56 409 aa10.76□□□□□ -0.69
AP003900.1-202ENST00000616952 L1RE1Q9UN81 338 aa10.76□□□□□ -0.69
AP003900.1-202ENST00000616952 KIF26BQ2KJY2 2108 aa10.76□□□□□ -0.69
AP003900.1-202ENST00000616952 A0A1W2PQ27 194 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 A0A1W2PQ64 194 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 A0A1W2PQC6 194 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 EFCAB7A8K855 629 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 K7ESM1 405 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 CASC3O15234 703 aaKnown RBP10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 SGSM2O43147 1006 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 HCRTO43612 131 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 PIAS2O75928 621 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 FAM155BO75949 473 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 ADRB2P07550 413 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 JMJD7P0C870 316 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 ARID5AQ03989 594 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 SSRP1Q08945 709 aaKnown RBP10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 MRPL49Q13405 166 aaKnown RBP10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 SPIDRQ14159 915 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 HECTD3Q5T447 861 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 TDRD10Q5VZ19 366 aaKnown RBP10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 B3GNT8Q7Z7M8 397 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 CATSPER3Q86XQ3 398 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 LINC00528Q8N1L1 170 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 WDR48Q8TAF3 677 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 GOLGA1Q92805 767 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 MYLPFQ96A32 169 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 DUSP23Q9BVJ7 150 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 PABPC3Q9H361 631 aaKnown RBP10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 CCSER2Q9H7U1 834 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 KMT5AQ9NQR1 393 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 FBXL12Q9NXK8 326 aa10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 TPX2Q9ULW0 747 aaKnown RBP10.75□□□□□ -0.69
AP003900.1-202ENST00000616952 FAM189A1O60320 539 aa10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 MED24O75448 989 aa10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 CNTN5O94779 1100 aa10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 C4BPAP04003 597 aaKnown RBP10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 BMP2P12643 396 aa10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 BDNFP23560 247 aa10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 IFRD2Q12894 506 aaPredicted RBP10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 STRN3Q13033 797 aa10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 FNDC3BQ53EP0 1204 aaKnown RBP10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 ZCCHC8Q6NZY4 707 aaKnown RBP10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 ZPBP2Q6X784 338 aa10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 ZNF276Q8N554 614 aa10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 PDZD8Q8NEN9 1154 aa10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 GTF3C6Q969F1 213 aa10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 PIWIL1Q96J94 861 aaKnown RBP10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 C5orf34Q96MH7 638 aa10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 NACA2Q9H009 215 aa10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 SYNDIG1Q9H7V2 258 aa10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 PREBQ9HCU5 417 aa10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 TUFT1Q9NNX1 390 aa10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 PRSS16Q9NQE7 514 aa10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 NCKIPSDQ9NZQ3 722 aa10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 MAGEC2Q9UBF1 373 aaPredicted RBP10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 LSM7Q9UK45 103 aaKnown RBP10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 PPM1HQ9ULR3 514 aa10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 SCML1Q9UN30 329 aa10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 RBM19Q9Y4C8 960 aaKnown RBP10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 SCN1AP35498 2009 aa10.74□□□□□ -0.69
AP003900.1-202ENST00000616952 SDK2Q58EX2 2172 aa10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 F8VP50 259 aa10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 SCAMP1O15126 338 aa10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 LATO43561 262 aa10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 PENKP01210 267 aaPredicted RBP10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 VSIG8P0DPA2 414 aa10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 CD82P27701 267 aa10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 PCSK1P29120 753 aa10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 TUBP50607 506 aa10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 PPP2CBP62714 309 aa10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 PPP2CAP67775 309 aa10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 SFSWAPQ12872 951 aaKnown RBP10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 SEPT6Q14141 434 aa10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 DHX8Q14562 1220 aaKnown RBP10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 DRAP1Q14919 205 aaPredicted RBP10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 NTRK3Q16288 839 aa10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 KYAT1Q16773 422 aa10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 PERM1Q5SV97 790 aa10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 TMEM215Q68D42 235 aa10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 GALNT17Q6IS24 598 aa10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 TMPRSS9Q7Z410 1059 aa10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 OSTM1Q86WC4 334 aa10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 CD302Q8IX05 232 aa10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 CCDC116Q8IYX3 515 aa10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 JPH3Q8WXH2 748 aaPredicted RBP10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 ZNF560Q96MR9 790 aa10.73□□□□□ -0.69
AP003900.1-202ENST00000616952 STRADBQ9C0K7 418 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms