RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 OLFM2O95897 454 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 IGLV3-27P01718 113 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 FGGP02679 453 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 SLC2A3P11169 496 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 CD72P21854 359 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 TGM1P22735 817 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 KDELR1P24390 212 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 CDC25CP30307 473 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 CCR1P32246 355 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 ADRA1BP35368 520 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 CDKN2BP42772 138 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 KPNA1P52294 538 aaPredicted RBP11.84□□□□□ -0.51
SLIRP-212ENST00000613856 ZNF135P52742 658 aaPredicted RBP11.84□□□□□ -0.51
SLIRP-212ENST00000613856 NTHL1P78549 312 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 RING1Q06587 406 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 MTA1Q13330 715 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 TRIP4Q15650 581 aaPredicted RBP11.84□□□□□ -0.51
SLIRP-212ENST00000613856 ARL13BQ3SXY8 428 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 ATP13A4Q4VNC1 1196 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 ODF2Q5BJF6 829 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 TFDP3Q5H9I0 405 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 EFHC2Q5JST6 749 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 KCNT1Q5JUK3 1230 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 C10orf120Q5SQS8 335 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 HECTD3Q5T447 861 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 TSSK4Q6SA08 328 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 MFSD7Q6UXD7 560 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 SLC13A5Q86YT5 568 aaPredicted RBP11.84□□□□□ -0.51
SLIRP-212ENST00000613856 MAP7D3Q8IWC1 876 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 MAIP1Q8WWC4 291 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 SMG7Q92540 1137 aaKnown RBP11.84□□□□□ -0.51
SLIRP-212ENST00000613856 RAPGEF5Q92565 580 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 HSPH1Q92598 858 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 FGF14Q92915 247 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 FAF2Q96CS3 445 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 SLC39A13Q96H72 371 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 MS4A14Q96JA4 679 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 GCNAQ96QF7 691 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 ZNF670Q9BS34 389 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 CARD6Q9BX69 1037 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 OSBPL8Q9BZF1 889 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 CCSER2Q9H7U1 834 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 PCDH18Q9HCL0 1135 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 PARD6AQ9NPB6 346 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 ASAH2Q9NR71 780 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 KLHL11Q9NVR0 708 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 MARCH2Q9P0N8 246 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 HBS1LQ9Y450 684 aaKnown RBP11.84□□□□□ -0.51
SLIRP-212ENST00000613856 NUP210Q8TEM1 1887 aaPredicted RBP11.84□□□□□ -0.51
SLIRP-212ENST00000613856 USP24Q9UPU5 2620 aa11.84□□□□□ -0.51
SLIRP-212ENST00000613856 DOCK4Q8N1I0 1966 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 hCG_1818297A0A087WSY0 165 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 SYNJ2BP-COX16A0A087WUM0 186 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 CTAGE15A4D2H0 777 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 SOBPA7XYQ1 873 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 ANHXE9PGG2 379 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 CCL16O15467 120 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 MSI1O43347 362 aaKnown RBP11.83□□□□□ -0.52
SLIRP-212ENST00000613856 SLU7O95391 586 aaKnown RBP11.83□□□□□ -0.52
SLIRP-212ENST00000613856 CTAGE8P0CG41 777 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 LAMP2P13473 410 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 L1CAMP32004 1257 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 ATP5C1P36542 298 aaKnown RBP11.83□□□□□ -0.52
SLIRP-212ENST00000613856 CDH6P55285 790 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 TBX4P57082 545 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 EFEMP1Q12805 493 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 SEMA3BQ13214 749 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 KLF1Q13351 362 aaPredicted RBP11.83□□□□□ -0.52
SLIRP-212ENST00000613856 DPYSL3Q14195 570 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 KRT81Q14533 505 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 ZFYVE27Q5T4F4 411 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 ACBD5Q5T8D3 534 aaPredicted RBP11.83□□□□□ -0.52
SLIRP-212ENST00000613856 AADACL2Q6P093 401 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 ZC3H14Q6PJT7 736 aaKnown RBP11.83□□□□□ -0.52
SLIRP-212ENST00000613856 PARM1Q6UWI2 310 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 CTAGE6Q86UF2 777 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 CCDC50Q8IVM0 306 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 CTAGE4Q8IX94 777 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 KCTD6Q8NC69 237 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 TSC1Q92574 1164 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 RNF25Q96BH1 459 aaPredicted RBP11.83□□□□□ -0.52
SLIRP-212ENST00000613856 FCRL2Q96LA5 508 aaPredicted RBP11.83□□□□□ -0.52
SLIRP-212ENST00000613856 HAPLN3Q96S86 360 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 PRKD2Q9BZL6 878 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 OSBPL2Q9H1P3 480 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 WDCPQ9H6R7 721 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 PRDM16Q9HAZ2 1276 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.83□□□□□ -0.52
SLIRP-212ENST00000613856 COX16Q9P0S2 106 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 NCDNQ9UBB6 729 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 SFMBT1Q9UHJ3 866 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 RASAL2Q9UJF2 1139 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 DNMT3LQ9UJW3 386 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 NUDT5Q9UKK9 219 aa11.83□□□□□ -0.52
SLIRP-212ENST00000613856 GOLGA6L10A0A0M3HER8 536 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 KCNU1A8MYU2 1149 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 CCDC188H7C350 402 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 I6L893 689 aaPredicted RBP11.82□□□□□ -0.52
SLIRP-212ENST00000613856 COCHO43405 550 aa11.82□□□□□ -0.52
SLIRP-212ENST00000613856 CD48P09326 243 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms