RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 RAP1GAP2Q684P5 730 aa12.77□□□□□ -0.37
CBWD3-208ENST00000612050 KIAA1324Q6UXG2 1013 aaKnown RBP12.77□□□□□ -0.37
CBWD3-208ENST00000612050 LRRC31Q6UY01 552 aa12.77□□□□□ -0.37
CBWD3-208ENST00000612050 KBTBD6Q86V97 674 aa12.77□□□□□ -0.37
CBWD3-208ENST00000612050 FIBINQ8TAL6 211 aa12.77□□□□□ -0.37
CBWD3-208ENST00000612050 CPA5Q8WXQ8 436 aa12.77□□□□□ -0.37
CBWD3-208ENST00000612050 FBRSQ9HAH7 460 aa12.77□□□□□ -0.37
CBWD3-208ENST00000612050 SUN2Q9UH99 717 aa12.77□□□□□ -0.37
CBWD3-208ENST00000612050 CDV3Q9UKY7 258 aaKnown RBP12.77□□□□□ -0.37
CBWD3-208ENST00000612050 MYO6Q9UM54 1294 aa12.77□□□□□ -0.37
CBWD3-208ENST00000612050 PIEZO1Q92508 2521 aa12.77□□□□□ -0.37
CBWD3-208ENST00000612050 RALGAPA1Q6GYQ0 2036 aa12.77□□□□□ -0.37
CBWD3-208ENST00000612050 GOLGA6L7A0A1B0GV03 622 aa12.76□□□□□ -0.37
CBWD3-208ENST00000612050 LUC7L3O95232 432 aaKnown RBP12.76□□□□□ -0.37
CBWD3-208ENST00000612050 IGLV3-25P01717 112 aa12.76□□□□□ -0.37
CBWD3-208ENST00000612050 CALB1P05937 261 aa12.76□□□□□ -0.37
CBWD3-208ENST00000612050 EPHX1P07099 455 aa12.76□□□□□ -0.37
CBWD3-208ENST00000612050 SLC6A4P31645 630 aa12.76□□□□□ -0.37
CBWD3-208ENST00000612050 ID4P47928 161 aa12.76□□□□□ -0.37
CBWD3-208ENST00000612050 DHPSP49366 369 aaPredicted RBP12.76□□□□□ -0.37
CBWD3-208ENST00000612050 NOMO3P69849 1222 aa12.76□□□□□ -0.37
CBWD3-208ENST00000612050 CREB5Q02930 508 aa12.76□□□□□ -0.37
CBWD3-208ENST00000612050 SLC12A1Q13621 1099 aa12.76□□□□□ -0.37
CBWD3-208ENST00000612050 ZNF234Q14588 700 aa12.76□□□□□ -0.37
CBWD3-208ENST00000612050 TAF5Q15542 800 aa12.76□□□□□ -0.37
CBWD3-208ENST00000612050 CSRP2Q16527 193 aa12.76□□□□□ -0.37
CBWD3-208ENST00000612050 ARL13BQ3SXY8 428 aa12.76□□□□□ -0.37
CBWD3-208ENST00000612050 SLC25A52Q3SY17 297 aa12.76□□□□□ -0.37
CBWD3-208ENST00000612050 AASDHQ4L235 1098 aaPredicted RBP12.76□□□□□ -0.37
CBWD3-208ENST00000612050 SPDYCQ5MJ68 293 aa12.76□□□□□ -0.37
CBWD3-208ENST00000612050 MBLAC2Q68D91 279 aa12.76□□□□□ -0.37
CBWD3-208ENST00000612050 CYP2U1Q7Z449 544 aa12.76□□□□□ -0.37
CBWD3-208ENST00000612050 DHX40Q8IX18 779 aaKnown RBP12.76□□□□□ -0.37
CBWD3-208ENST00000612050 DDX1Q92499 740 aaKnown RBP12.76□□□□□ -0.37
CBWD3-208ENST00000612050 PRCCQ92733 491 aaPredicted RBP12.76□□□□□ -0.37
CBWD3-208ENST00000612050 RPRD1AQ96P16 312 aaPredicted RBP12.76□□□□□ -0.37
CBWD3-208ENST00000612050 SELENOOQ9BVL4 669 aa12.76□□□□□ -0.37
CBWD3-208ENST00000612050 NUCKS1Q9H1E3 243 aaKnown RBP12.76□□□□□ -0.37
CBWD3-208ENST00000612050 ARRDC1-AS1Q9H2J1 176 aa12.76□□□□□ -0.37
CBWD3-208ENST00000612050 PRDM16Q9HAZ2 1276 aa12.76□□□□□ -0.37
CBWD3-208ENST00000612050 VPS45Q9NRW7 570 aa12.76□□□□□ -0.37
CBWD3-208ENST00000612050 SEMA4GQ9NTN9 838 aa12.76□□□□□ -0.37
CBWD3-208ENST00000612050 FARP1Q9Y4F1 1045 aaPredicted RBP12.76□□□□□ -0.37
CBWD3-208ENST00000612050 A0A1B0GVM2 712 aa12.75□□□□□ -0.37
CBWD3-208ENST00000612050 TCAF2A6NFQ2 919 aa12.75□□□□□ -0.37
CBWD3-208ENST00000612050 RNASEH1O60930 286 aaKnown RBP12.75□□□□□ -0.37
CBWD3-208ENST00000612050 DLDP09622 509 aaKnown RBP12.75□□□□□ -0.37
CBWD3-208ENST00000612050 ATP1A3P13637 1013 aa12.75□□□□□ -0.37
CBWD3-208ENST00000612050 GABRG2P18507 467 aa12.75□□□□□ -0.37
CBWD3-208ENST00000612050 HLA-FP30511 346 aa12.75□□□□□ -0.37
CBWD3-208ENST00000612050 SDC4P31431 198 aa12.75□□□□□ -0.37
CBWD3-208ENST00000612050 MPLP40238 635 aa12.75□□□□□ -0.37
CBWD3-208ENST00000612050 P2RY2P41231 377 aa12.75□□□□□ -0.37
CBWD3-208ENST00000612050 RPL6Q02878 288 aaKnown RBP12.75□□□□□ -0.37
CBWD3-208ENST00000612050 PMS2CLQ68D20 193 aa12.75□□□□□ -0.37
CBWD3-208ENST00000612050 DPY19L2P1Q6NXN4 242 aa12.75□□□□□ -0.37
CBWD3-208ENST00000612050 ARCQ7LC44 396 aa12.75□□□□□ -0.37
CBWD3-208ENST00000612050 RABEPKQ7Z6M1 372 aa12.75□□□□□ -0.37
CBWD3-208ENST00000612050 XYLT1Q86Y38 959 aa12.75□□□□□ -0.37
CBWD3-208ENST00000612050 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.75□□□□□ -0.37
CBWD3-208ENST00000612050 ACOX2Q99424 681 aa12.75□□□□□ -0.37
CBWD3-208ENST00000612050 NUP58Q9BVL2 599 aa12.75□□□□□ -0.37
CBWD3-208ENST00000612050 DUSP15Q9H1R2 295 aaPredicted RBP12.75□□□□□ -0.37
CBWD3-208ENST00000612050 RTN4Q9NQC3 1192 aaKnown RBP12.75□□□□□ -0.37
CBWD3-208ENST00000612050 CALCOCO1Q9P1Z2 691 aa12.75□□□□□ -0.37
CBWD3-208ENST00000612050 NOCTQ9UK39 431 aaKnown RBP12.75□□□□□ -0.37
CBWD3-208ENST00000612050 INVSQ9Y283 1065 aa12.75□□□□□ -0.37
CBWD3-208ENST00000612050 RAD54BQ9Y620 910 aa12.75□□□□□ -0.37
CBWD3-208ENST00000612050 MYO18AQ92614 2054 aaKnown RBP12.75□□□□□ -0.37
CBWD3-208ENST00000612050 EML5Q05BV3 1969 aa12.75□□□□□ -0.37
CBWD3-208ENST00000612050 SPAG17Q6Q759 2223 aa12.75□□□□□ -0.37
CBWD3-208ENST00000612050 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.74□□□□□ -0.37
CBWD3-208ENST00000612050 A0A1W2PQC6 194 aa12.74□□□□□ -0.37
CBWD3-208ENST00000612050 A0A1W2PQF6 199 aa12.74□□□□□ -0.37
CBWD3-208ENST00000612050 DCLK1O15075 740 aa12.74□□□□□ -0.37
CBWD3-208ENST00000612050 CYP1A1P04798 512 aaPredicted RBP12.74□□□□□ -0.37
CBWD3-208ENST00000612050 NDUFV2P19404 249 aa12.74□□□□□ -0.37
CBWD3-208ENST00000612050 TNFAIP3P21580 790 aa12.74□□□□□ -0.37
CBWD3-208ENST00000612050 OXTRP30559 389 aa12.74□□□□□ -0.37
CBWD3-208ENST00000612050 RDXP35241 583 aaKnown RBP12.74□□□□□ -0.37
CBWD3-208ENST00000612050 IL12RB1P42701 662 aa12.74□□□□□ -0.37
CBWD3-208ENST00000612050 RPS24P62847 133 aaKnown RBP12.74□□□□□ -0.37
CBWD3-208ENST00000612050 FMO1Q01740 532 aa12.74□□□□□ -0.37
CBWD3-208ENST00000612050 SULT2A1Q06520 285 aa12.74□□□□□ -0.37
CBWD3-208ENST00000612050 ZNF177Q13360 481 aaPredicted RBP12.74□□□□□ -0.37
CBWD3-208ENST00000612050 ASIC2Q16515 512 aa12.74□□□□□ -0.37
CBWD3-208ENST00000612050 SYCP2LQ5T4T6 812 aa12.74□□□□□ -0.37
CBWD3-208ENST00000612050 NADSYN1Q6IA69 706 aa12.74□□□□□ -0.37
CBWD3-208ENST00000612050 PRR23CQ6ZRP0 262 aa12.74□□□□□ -0.37
CBWD3-208ENST00000612050 MMS22LQ6ZRQ5 1243 aa12.74□□□□□ -0.37
CBWD3-208ENST00000612050 CFAP52Q8N1V2 620 aa12.74□□□□□ -0.37
CBWD3-208ENST00000612050 OLIG1Q8TAK6 271 aa12.74□□□□□ -0.37
CBWD3-208ENST00000612050 SLC20A1Q8WUM9 679 aa12.74□□□□□ -0.37
CBWD3-208ENST00000612050 IQCDQ96DY2 449 aa12.74□□□□□ -0.37
CBWD3-208ENST00000612050 PGAP3Q96FM1 320 aaPredicted RBP12.74□□□□□ -0.37
CBWD3-208ENST00000612050 SIPA1Q96FS4 1042 aa12.74□□□□□ -0.37
CBWD3-208ENST00000612050 PRICKLE1Q96MT3 831 aaPredicted RBP12.74□□□□□ -0.37
CBWD3-208ENST00000612050 NPY6RQ99463 290 aa12.74□□□□□ -0.37
CBWD3-208ENST00000612050 AGPAT1Q99943 283 aa12.74□□□□□ -0.37
CBWD3-208ENST00000612050 C11orf70Q9BRQ4 267 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms