RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 ALS2CLQ60I27 953 aa12.69□□□□□ -0.38
CBWD1-220ENST00000612045 RWDD4Q6NW29 188 aaKnown RBP12.69□□□□□ -0.38
CBWD1-220ENST00000612045 LILRA6Q6PI73 481 aa12.69□□□□□ -0.38
CBWD1-220ENST00000612045 NETO2Q8NC67 525 aa12.69□□□□□ -0.38
CBWD1-220ENST00000612045 TFB1MQ8WVM0 346 aaKnown RBP12.69□□□□□ -0.38
CBWD1-220ENST00000612045 PSMG2Q969U7 264 aa12.69□□□□□ -0.38
CBWD1-220ENST00000612045 LGMNQ99538 433 aa12.69□□□□□ -0.38
CBWD1-220ENST00000612045 C17orf80Q9BSJ5 609 aa12.69□□□□□ -0.38
CBWD1-220ENST00000612045 SLC12A6Q9UHW9 1150 aa12.69□□□□□ -0.38
CBWD1-220ENST00000612045 DNMT3LQ9UJW3 386 aa12.69□□□□□ -0.38
CBWD1-220ENST00000612045 ATP8A1Q9Y2Q0 1164 aa12.69□□□□□ -0.38
CBWD1-220ENST00000612045 RAD54BQ9Y620 910 aa12.69□□□□□ -0.38
CBWD1-220ENST00000612045 CDH23Q9H251 3354 aa12.69□□□□□ -0.38
CBWD1-220ENST00000612045 GOLGA6BA6NDN3 693 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 HIDE1A8MVS5 230 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 E9PAM4 449 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 PPP1R12AO14974 1030 aaPredicted RBP12.68□□□□□ -0.38
CBWD1-220ENST00000612045 MYOGP15173 224 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 DNAJB1P25685 340 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 SERPINB6P35237 376 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 ACTN2P35609 894 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 CHKAP35790 457 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 PPP3CCP48454 512 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 RING1Q06587 406 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 SLMAPQ14BN4 828 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 C9orf50Q5SZB4 431 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 RNASEH2BQ5TBB1 312 aaKnown RBP12.68□□□□□ -0.38
CBWD1-220ENST00000612045 KLHDC10Q6PID8 442 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 PCGF5Q86SE9 256 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 C14orf80Q86SX3 495 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 TP53INP2Q8IXH6 220 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 IQCKQ8N0W5 287 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 NPWQ8N729 165 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 ATP6V0D2Q8N8Y2 350 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 SPPL3Q8TCT6 385 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 POF1BQ8WVV4 589 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 UBLCP1Q8WVY7 318 aaPredicted RBP12.68□□□□□ -0.38
CBWD1-220ENST00000612045 ZBTB9Q96C00 473 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 TBC1D31Q96DN5 1066 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 BTN2A3PQ96KV6 586 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 EMILIN2Q9BXX0 1053 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 TSPYL1Q9H0U9 437 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 PAK5Q9P286 719 aa12.68□□□□□ -0.38
CBWD1-220ENST00000612045 UXTQ9UBK9 157 aaPredicted RBP12.68□□□□□ -0.38
CBWD1-220ENST00000612045 HBS1LQ9Y450 684 aaKnown RBP12.68□□□□□ -0.38
CBWD1-220ENST00000612045 FARP1Q9Y4F1 1045 aaPredicted RBP12.68□□□□□ -0.38
CBWD1-220ENST00000612045 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.67□□□□□ -0.38
CBWD1-220ENST00000612045 C2orf71A6NGG8 1288 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 C5orf67F2Z3F1 127 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 NCAM2O15394 837 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 FGF10O15520 208 aaPredicted RBP12.67□□□□□ -0.38
CBWD1-220ENST00000612045 GCATO75600 419 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 CSPG5O95196 566 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 HMBSP08397 361 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 VAV1P15498 845 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 TUBP50607 506 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 PMS2P54278 862 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 UBE3AQ05086 875 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 PRKD1Q15139 912 aaPredicted RBP12.67□□□□□ -0.38
CBWD1-220ENST00000612045 MS4A13Q5J8X5 152 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 SPDYCQ5MJ68 293 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 CFAP58Q5T655 872 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 PLPP4Q5VZY2 271 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 HEATR6Q6AI08 1181 aaKnown RBP12.67□□□□□ -0.38
CBWD1-220ENST00000612045 SPRED2Q7Z698 418 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 ITIH5Q86UX2 942 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 CCDC25Q86WR0 208 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 ZCCHC9Q8N567 271 aaKnown RBP12.67□□□□□ -0.38
CBWD1-220ENST00000612045 MRPL43Q8N983 215 aaKnown RBP12.67□□□□□ -0.38
CBWD1-220ENST00000612045 HTR3CQ8WXA8 447 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 CPT1BQ92523 772 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 NACA2Q9H009 215 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 PRDM12Q9H4Q4 367 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 CATSPERBQ9H7T0 1116 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 TLR9Q9NR96 1032 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 OGFRQ9NZT2 677 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 C5orf60A6NFR6 353 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 SPDYE4A6NLX3 237 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 GRXCR1A8MXD5 290 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 AGPSO00116 658 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 COCHO43405 550 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 ARHGEF15O94989 841 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 KCNQ1P51787 676 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 AP1B1Q10567 949 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 GPS2Q13227 327 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 AUHQ13825 339 aaKnown RBP12.67□□□□□ -0.38
CBWD1-220ENST00000612045 FAM182AQ5T1J6 154 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 NUGGCQ68CJ6 796 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 FAM109BQ6ICB4 259 aaPredicted RBP12.67□□□□□ -0.38
CBWD1-220ENST00000612045 CCDC149Q6ZUS6 474 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 TMEM150AQ86TG1 271 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 PPIL6Q8IXY8 311 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 TAB3Q8N5C8 712 aaPredicted RBP12.67□□□□□ -0.38
CBWD1-220ENST00000612045 KREMEN2Q8NCW0 462 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 CCNYQ8ND76 341 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 CCDC110Q8TBZ0 833 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 PRCCQ92733 491 aaPredicted RBP12.67□□□□□ -0.38
CBWD1-220ENST00000612045 PWWP2AQ96N64 755 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 ZIM3Q96PE6 472 aa12.67□□□□□ -0.38
CBWD1-220ENST00000612045 FOXP3Q9BZS1 431 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms