RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 CCT8L1PA6NM43 557 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 ZNF197O14709 1029 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 CASQ2O14958 399 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-218ENST00000610726 CFHP08603 1231 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 HSPA8P11142 646 aaKnown RBP7.46□□□□□ -1.22
CSDE1-218ENST00000610726 ENO3P13929 434 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-218ENST00000610726 SELPP16109 830 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 HDCP19113 662 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 BGNP21810 368 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 MAP2K2P36507 400 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 ATXN3P54252 364 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-218ENST00000610726 GRB14Q14449 540 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 PSMD5Q16401 504 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 ZNF792Q3KQV3 632 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 USP41Q3LFD5 358 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 C6orf10Q5SRN2 563 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 TMEM63BQ5T3F8 832 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.46□□□□□ -1.22
CSDE1-218ENST00000610726 HERC6Q8IVU3 1022 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 TCP10LQ8TDR4 215 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 SLC26A7Q8TE54 656 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 FBXL18Q96ME1 805 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 SPATA13Q96N96 652 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 KCNK16Q96T55 309 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 Q9H521 79 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 GPAMQ9HCL2 828 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 MPP6Q9NZW5 540 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 TRHDEQ9UKU6 1024 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 STXBP5LQ9Y2K9 1186 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 CDY1Q9Y6F8 540 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 GON4LQ3T8J9 2241 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 SDK1Q7Z5N4 2213 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 A8MX80 341 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 B2RBV5 119 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 AIM2O14862 343 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 MDM4O15151 490 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 TLR5O60602 858 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 CD48P09326 243 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 NDUFV1P49821 464 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 PDCD2Q16342 344 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-218ENST00000610726 ASTE1Q2TB18 679 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-218ENST00000610726 HECTD3Q5T447 861 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 ZNF470Q6ECI4 717 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 LRRC8DQ7L1W4 858 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 IFNEQ86WN2 208 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 ERLEC1Q96DZ1 483 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 FCRL2Q96LA5 508 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-218ENST00000610726 GBP5Q96PP8 586 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 ZNF670Q9BS34 389 aa7.46□□□□□ -1.22
CSDE1-218ENST00000610726 UBE2OQ9C0C9 1292 aaKnown RBP7.46□□□□□ -1.22
CSDE1-218ENST00000610726 TRMT6Q9UJA5 497 aaKnown RBP7.46□□□□□ -1.22
CSDE1-218ENST00000610726 HACD1B0YJ81 288 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 PPEF2O14830 753 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 AVILO75366 819 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 DGKIO75912 1065 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 ERVK-10P10266 1014 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 RALBP11234 206 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 CKBP12277 381 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 SERPINB8P50452 374 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 ACLYP53396 1101 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 MAXP61244 160 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 GBE1Q04446 702 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 AGAP9Q5VTM2 703 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 FBXW10Q5XX13 1052 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 OTOP2Q7RTS6 562 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 ZNF467Q7Z7K2 595 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-218ENST00000610726 LCA5Q86VQ0 697 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 KCNMB4Q86W47 210 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 CACUL1Q86Y37 369 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 DTX3LQ8TDB6 740 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 MTBPQ96DY7 904 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 SCLYQ96I15 445 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 TWNKQ96RR1 684 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 CDK5RAP1Q96SZ6 601 aaKnown RBP7.45□□□□□ -1.22
CSDE1-218ENST00000610726 CASS4Q9NQ75 786 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 TBC1D13Q9NVG8 400 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 HEY2Q9UBP5 337 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 ITGB4P16144 1822 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 MAP3K7O43318 606 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 TRIM16O95361 564 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 GLP2RO95838 553 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 PIGRP01833 764 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 CYP1A1P04798 512 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-218ENST00000610726 NFKB1P19838 968 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 ADRA1BP35368 520 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 GP5P40197 560 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 PBX3P40426 434 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 TAF10Q12962 218 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 CAPRIN1Q14444 709 aaKnown RBP7.45□□□□□ -1.22
CSDE1-218ENST00000610726 PARP6Q2NL67 630 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 SLC25A52Q3SY17 297 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 PPM1LQ5SGD2 360 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 RGS9BPQ6ZS82 235 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 DENND1CQ8IV53 801 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 PCED1BQ96HM7 432 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 TTPALQ9BTX7 342 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 THTPAQ9BU02 230 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 DCDC2Q9UHG0 476 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 ANGPTL2Q9UKU9 493 aa7.45□□□□□ -1.22
CSDE1-218ENST00000610726 NHSL1Q5SYE7 1610 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms