RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 CHODLQ9H9P2 273 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 GAR1Q9NY12 217 aaKnown RBP4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 BAG5Q9UL15 447 aa4.84□□□□□ -1.63
SMCHD1-213ENST00000609587 AOX1Q06278 1338 aa4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 TCRBV5S1A1TA0A578 114 aa4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 MBD3L5A6NJ08 208 aaPredicted RBP4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 BTBD19C9JJ37 291 aa4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 H3BNC9 293 aa4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 SMIM22K7EJ46 135 aa4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 IKBKBO14920 756 aa4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 TFRCP02786 760 aaKnown RBP4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 CYP3A4P08684 503 aa4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 ABCG1P45844 678 aa4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 PROK1P58294 105 aa4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 TAS2R50P59544 299 aa4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 TLE3Q04726 772 aa4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 PDCLQ13371 301 aa4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 LARS2Q15031 903 aaKnown RBP4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 FCRLBQ6BAA4 426 aa4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 VSTM1Q6UX27 236 aa4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 KYAT3Q6YP21 454 aaKnown RBP4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 ZNF788Q6ZQV5 615 aa4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 PTF1AQ7RTS3 328 aa4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 TMEM57Q8N5G2 664 aa4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 ADAMTS18Q8TE60 1221 aa4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 TRMT61AQ96FX7 289 aaKnown RBP4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 COG8Q96MW5 612 aa4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 RNF26Q9BY78 433 aaPredicted RBP4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 ABHD16BQ9H3Z7 469 aa4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 TMLHEQ9NVH6 421 aa4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 PCDHA10Q9Y5I2 948 aa4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 LRRFIP2Q9Y608 721 aaKnown RBP4.83□□□□□ -1.64
SMCHD1-213ENST00000609587 SPATA31A1Q5TZJ5 1347 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 FAM90A20PA6NIJ5 464 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 AGAP5A6NIR3 686 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 CGB1A6NKQ9 187 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 C3orf70A6NLC5 250 aaPredicted RBP4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 UBE2Q2LH0YL09 131 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 NCAM2O15394 837 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 HEXIM1O94992 359 aaKnown RBP4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 ALDOAP04075 364 aaKnown RBP4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 CYP21A2P08686 494 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 ATF7P17544 494 aaPredicted RBP4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 PAX3P23760 479 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 NDUFS1P28331 727 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 SLC8A1P32418 973 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 MCM2P49736 904 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 VPS41P49754 854 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 AGTR2P50052 363 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 ZNF81P51508 661 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 RCAN1P53805 252 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 FOXL2P58012 376 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 GAB1Q13480 694 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 EFR3AQ14156 821 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 FAM110CQ1W6H9 321 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 ALFQ53S48 1182 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 CC2D1BQ5T0F9 858 aaKnown RBP4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 SUMO4Q6EEV6 95 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 SYNE3Q6ZMZ3 975 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 LAS2Q8IYD9 372 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 SRFBP1Q8NEF9 429 aaKnown RBP4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 CEP70Q8NHQ1 597 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 EVI5LQ96CN4 794 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 HIC2Q96JB3 615 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 PIGSQ96S52 555 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 SLC29A3Q9BZD2 475 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 RIC8AQ9NPQ8 531 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 C9orf78Q9NZ63 289 aaPredicted RBP4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 SEMA5BQ9P283 1151 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 SERGEFQ9UGK8 458 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 LZTS1Q9Y250 596 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 DERAQ9Y315 318 aa4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 RRP7AQ9Y3A4 280 aaKnown RBP4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 HEMK1Q9Y5R4 338 aaPredicted RBP4.82□□□□□ -1.64
SMCHD1-213ENST00000609587 WIPF3A6NGB9 483 aa4.81□□□□□ -1.64
SMCHD1-213ENST00000609587 RRN3P2A6NIE6 340 aa4.81□□□□□ -1.64
SMCHD1-213ENST00000609587 POC1B-GALNT4F8VUJ3 575 aa4.81□□□□□ -1.64
SMCHD1-213ENST00000609587 SEPT4O43236 478 aa4.81□□□□□ -1.64
SMCHD1-213ENST00000609587 HNRNPRO43390 633 aaKnown RBP4.81□□□□□ -1.64
SMCHD1-213ENST00000609587 KAT7O95251 611 aa4.81□□□□□ -1.64
SMCHD1-213ENST00000609587 CKMT1AP12532 417 aa4.81□□□□□ -1.64
SMCHD1-213ENST00000609587 PCP4P48539 62 aa4.81□□□□□ -1.64
SMCHD1-213ENST00000609587 SLC14A1Q13336 389 aa4.81□□□□□ -1.64
SMCHD1-213ENST00000609587 SLC12A1Q13621 1099 aa4.81□□□□□ -1.64
SMCHD1-213ENST00000609587 ANKS1BQ7Z6G8 1248 aa4.81□□□□□ -1.64
SMCHD1-213ENST00000609587 LRRTM4Q86VH4 590 aa4.81□□□□□ -1.64
SMCHD1-213ENST00000609587 GALNT4Q8N4A0 578 aa4.81□□□□□ -1.64
SMCHD1-213ENST00000609587 FSIP1Q8NA03 581 aa4.81□□□□□ -1.64
SMCHD1-213ENST00000609587 SLC2A12Q8TD20 617 aa4.81□□□□□ -1.64
SMCHD1-213ENST00000609587 HASPINQ8TF76 798 aa4.81□□□□□ -1.64
SMCHD1-213ENST00000609587 CLEC4CQ8WTT0 213 aa4.81□□□□□ -1.64
SMCHD1-213ENST00000609587 USP13Q92995 863 aaPredicted RBP4.81□□□□□ -1.64
SMCHD1-213ENST00000609587 PRDM16Q9HAZ2 1276 aa4.81□□□□□ -1.64
SMCHD1-213ENST00000609587 NOD2Q9HC29 1040 aa4.81□□□□□ -1.64
SMCHD1-213ENST00000609587 RASSF1Q9NS23 344 aa4.81□□□□□ -1.64
SMCHD1-213ENST00000609587 ASNSD1Q9NWL6 643 aa4.81□□□□□ -1.64
SMCHD1-213ENST00000609587 CYP3A7-CYP3A51PA0A087WV96 503 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 PRYO14603 147 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 PRKCGP05129 697 aa4.8□□□□□ -1.64
SMCHD1-213ENST00000609587 PYGLP06737 847 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms