RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 CFAP52Q8N1V2 620 aa17.15■□□□□ 0.34
LINC00240-203ENST00000606878 CARNMT1Q8N4J0 409 aa17.15■□□□□ 0.34
LINC00240-203ENST00000606878 BAP1Q92560 729 aa17.15■□□□□ 0.34
LINC00240-203ENST00000606878 NT5C3BQ969T7 300 aa17.15■□□□□ 0.34
LINC00240-203ENST00000606878 GABRG3Q99928 467 aa17.15■□□□□ 0.34
LINC00240-203ENST00000606878 C11orf70Q9BRQ4 267 aa17.15■□□□□ 0.34
LINC00240-203ENST00000606878 ABCB8Q9NUT2 735 aa17.15■□□□□ 0.34
LINC00240-203ENST00000606878 CACNA2D2Q9NY47 1150 aa17.15■□□□□ 0.34
LINC00240-203ENST00000606878 GGA2Q9UJY4 613 aa17.15■□□□□ 0.34
LINC00240-203ENST00000606878 TMEM59LQ9UK28 342 aa17.15■□□□□ 0.34
LINC00240-203ENST00000606878 STON1Q9Y6Q2 735 aa17.15■□□□□ 0.34
LINC00240-203ENST00000606878 FANCMQ8IYD8 2048 aa17.14■□□□□ 0.34
LINC00240-203ENST00000606878 WASH3PC4AMC7 463 aa17.14■□□□□ 0.33
LINC00240-203ENST00000606878 CALB1P05937 261 aa17.14■□□□□ 0.33
LINC00240-203ENST00000606878 ATP5BP06576 529 aaKnown RBP17.14■□□□□ 0.33
LINC00240-203ENST00000606878 PABPC1P11940 636 aaKnown RBP17.14■□□□□ 0.33
LINC00240-203ENST00000606878 CXCR3P49682 368 aa17.14■□□□□ 0.33
LINC00240-203ENST00000606878 CENPCQ03188 943 aa17.14■□□□□ 0.33
LINC00240-203ENST00000606878 BRMS1LQ5PSV4 323 aa17.14■□□□□ 0.33
LINC00240-203ENST00000606878 SFMBT2Q5VUG0 894 aa17.14■□□□□ 0.33
LINC00240-203ENST00000606878 RNF43Q68DV7 783 aa17.14■□□□□ 0.33
LINC00240-203ENST00000606878 KIAA0907Q7Z7F0 614 aaPredicted RBP17.14■□□□□ 0.33
LINC00240-203ENST00000606878 PHLDB2Q86SQ0 1253 aa17.14■□□□□ 0.33
LINC00240-203ENST00000606878 C11orf74Q86VG3 221 aa17.14■□□□□ 0.33
LINC00240-203ENST00000606878 PHF13Q86YI8 300 aaPredicted RBP17.14■□□□□ 0.33
LINC00240-203ENST00000606878 AHI1Q8N157 1196 aa17.14■□□□□ 0.33
LINC00240-203ENST00000606878 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.14■□□□□ 0.33
LINC00240-203ENST00000606878 MDGA1Q8NFP4 955 aa17.14■□□□□ 0.33
LINC00240-203ENST00000606878 HMGB4Q8WW32 186 aa17.14■□□□□ 0.33
LINC00240-203ENST00000606878 PGAP3Q96FM1 320 aaPredicted RBP17.14■□□□□ 0.33
LINC00240-203ENST00000606878 AIPL1Q9NZN9 384 aa17.14■□□□□ 0.33
LINC00240-203ENST00000606878 A0A1W2PQF6 199 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 LRRC53A6NM62 1247 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 H0Y626 953 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 SYNCRIPO60506 623 aaKnown RBP17.13■□□□□ 0.33
LINC00240-203ENST00000606878 PAGE1O75459 146 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 RETP07949 1114 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 KRT3P12035 628 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 POLR2EP19388 210 aaKnown RBP17.13■□□□□ 0.33
LINC00240-203ENST00000606878 FLT3P36888 993 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 CDH18Q13634 790 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 AUHQ13825 339 aaKnown RBP17.13■□□□□ 0.33
LINC00240-203ENST00000606878 STARD3Q14849 445 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 ASIC2Q16515 512 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 FIGNQ5HY92 759 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 RABGAP1LQ5R372 815 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 TMEM215Q68D42 235 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 ACAD10Q6JQN1 1059 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 PPP1R2P3Q6NXS1 205 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.13■□□□□ 0.33
LINC00240-203ENST00000606878 ADIPOR2Q86V24 386 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 DCLK2Q8N568 766 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 FAM160A2Q8N612 972 aaPredicted RBP17.13■□□□□ 0.33
LINC00240-203ENST00000606878 GPR161Q8N6U8 529 aaKnown RBP17.13■□□□□ 0.33
LINC00240-203ENST00000606878 SORCS1Q8WY21 1168 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 MYEOVQ96EZ4 313 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 ZC3H10Q96K80 434 aaKnown RBP17.13■□□□□ 0.33
LINC00240-203ENST00000606878 PRICKLE1Q96MT3 831 aaPredicted RBP17.13■□□□□ 0.33
LINC00240-203ENST00000606878 TBCBQ99426 244 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 PRMT1Q99873 361 aaKnown RBP17.13■□□□□ 0.33
LINC00240-203ENST00000606878 TPSD1Q9BZJ3 242 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 TKTL2Q9H0I9 626 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 PIGVQ9NUD9 493 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 KIAA1522Q9P206 1035 aaPredicted RBP17.13■□□□□ 0.33
LINC00240-203ENST00000606878 INVSQ9Y283 1065 aa17.13■□□□□ 0.33
LINC00240-203ENST00000606878 RHOBTB1O94844 696 aa17.12■□□□□ 0.33
LINC00240-203ENST00000606878 LUC7L3O95232 432 aaKnown RBP17.12■□□□□ 0.33
LINC00240-203ENST00000606878 TPM3P06753 285 aa17.12■□□□□ 0.33
LINC00240-203ENST00000606878 PDGFRAP16234 1089 aa17.12■□□□□ 0.33
LINC00240-203ENST00000606878 TFE3P19532 575 aaPredicted RBP17.12■□□□□ 0.33
LINC00240-203ENST00000606878 CD70P32970 193 aa17.12■□□□□ 0.33
LINC00240-203ENST00000606878 PTP4A2Q12974 167 aa17.12■□□□□ 0.33
LINC00240-203ENST00000606878 ENPP2Q13822 863 aa17.12■□□□□ 0.33
LINC00240-203ENST00000606878 ZNF234Q14588 700 aa17.12■□□□□ 0.33
LINC00240-203ENST00000606878 NFKBIBQ15653 356 aa17.12■□□□□ 0.33
LINC00240-203ENST00000606878 ACBD5Q5T8D3 534 aaPredicted RBP17.12■□□□□ 0.33
LINC00240-203ENST00000606878 TTC39BQ5VTQ0 682 aaPredicted RBP17.12■□□□□ 0.33
LINC00240-203ENST00000606878 MBLAC2Q68D91 279 aa17.12■□□□□ 0.33
LINC00240-203ENST00000606878 FBXL22Q6P050 247 aa17.12■□□□□ 0.33
LINC00240-203ENST00000606878 KBTBD6Q86V97 674 aa17.12■□□□□ 0.33
LINC00240-203ENST00000606878 OLIG1Q8TAK6 271 aa17.12■□□□□ 0.33
LINC00240-203ENST00000606878 RXFP2Q8WXD0 754 aa17.12■□□□□ 0.33
LINC00240-203ENST00000606878 LOXL4Q96JB6 756 aa17.12■□□□□ 0.33
LINC00240-203ENST00000606878 PPP1R9BQ96SB3 815 aa17.12■□□□□ 0.33
LINC00240-203ENST00000606878 SIK2Q9H0K1 926 aa17.12■□□□□ 0.33
LINC00240-203ENST00000606878 TSPY26PQ9H489 355 aa17.12■□□□□ 0.33
LINC00240-203ENST00000606878 METTL5Q9NRN9 209 aaKnown RBP17.12■□□□□ 0.33
LINC00240-203ENST00000606878 ARHGEF38Q9NXL2 777 aa17.12■□□□□ 0.33
LINC00240-203ENST00000606878 CALCOCO1Q9P1Z2 691 aa17.12■□□□□ 0.33
LINC00240-203ENST00000606878 WDR87Q6ZQQ6 2873 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 DCLK1O15075 740 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 MAP3K13O43283 966 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 MOCS3O95396 460 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 ADCY5O95622 1261 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 DLDP09622 509 aaKnown RBP17.11■□□□□ 0.33
LINC00240-203ENST00000606878 GABRG2P18507 467 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 SDC4P31431 198 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 IL12RB1P42701 662 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 OXCT1P55809 520 aa17.11■□□□□ 0.33
LINC00240-203ENST00000606878 C1QBPQ07021 282 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms