RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 MKRN2Q9H000 416 aaKnown RBP13.89□□□□□ -0.19
CTSA-213ENST00000606782 CAPN10Q9HC96 672 aa13.89□□□□□ -0.19
CTSA-213ENST00000606782 USP36Q9P275 1121 aaKnown RBP13.89□□□□□ -0.19
CTSA-213ENST00000606782 FHOD1Q9Y613 1164 aa13.89□□□□□ -0.19
CTSA-213ENST00000606782 UPK3BL1B0FP48 263 aa13.88□□□□□ -0.19
CTSA-213ENST00000606782 UPK3BL2E5RIL1 263 aa13.88□□□□□ -0.19
CTSA-213ENST00000606782 IRAK2O43187 625 aa13.88□□□□□ -0.19
CTSA-213ENST00000606782 SART1O43290 800 aaKnown RBP13.88□□□□□ -0.19
CTSA-213ENST00000606782 MSI1O43347 362 aaKnown RBP13.88□□□□□ -0.19
CTSA-213ENST00000606782 CALCAP01258 141 aa13.88□□□□□ -0.19
CTSA-213ENST00000606782 IGLV3-19P01714 112 aa13.88□□□□□ -0.19
CTSA-213ENST00000606782 NCAM1P13591 858 aa13.88□□□□□ -0.19
CTSA-213ENST00000606782 HLA-FP30511 346 aa13.88□□□□□ -0.19
CTSA-213ENST00000606782 ZNF75DP51815 510 aa13.88□□□□□ -0.19
CTSA-213ENST00000606782 JAM2P57087 298 aa13.88□□□□□ -0.19
CTSA-213ENST00000606782 POLR2FP61218 127 aaKnown RBP13.88□□□□□ -0.19
CTSA-213ENST00000606782 ZNF234Q14588 700 aa13.88□□□□□ -0.19
CTSA-213ENST00000606782 DRAP1Q14919 205 aaPredicted RBP13.88□□□□□ -0.19
CTSA-213ENST00000606782 ARHGAP44Q17R89 818 aa13.88□□□□□ -0.19
CTSA-213ENST00000606782 NUGGCQ68CJ6 796 aa13.88□□□□□ -0.19
CTSA-213ENST00000606782 ARMCX6Q7L4S7 300 aa13.88□□□□□ -0.19
CTSA-213ENST00000606782 VSTM4Q8IW00 320 aa13.88□□□□□ -0.19
CTSA-213ENST00000606782 SHC3Q92529 594 aa13.88□□□□□ -0.19
CTSA-213ENST00000606782 TTYH3Q9C0H2 523 aa13.88□□□□□ -0.19
CTSA-213ENST00000606782 PRDM16Q9HAZ2 1276 aa13.88□□□□□ -0.19
CTSA-213ENST00000606782 WSB2Q9NYS7 404 aaPredicted RBP13.88□□□□□ -0.19
CTSA-213ENST00000606782 SLC6A14Q9UN76 642 aa13.88□□□□□ -0.19
CTSA-213ENST00000606782 CYP8B1Q9UNU6 501 aa13.88□□□□□ -0.19
CTSA-213ENST00000606782 ITIH6Q6UXX5 1313 aa13.88□□□□□ -0.19
CTSA-213ENST00000606782 GOLGA6L3A6NEY3 463 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 CEACAM1P13688 526 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 ENGP17813 658 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 CD6P30203 668 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 ACADSBP45954 432 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 COPAP53621 1224 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 TBX4P57082 545 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 CAMK2GQ13555 558 aaPredicted RBP13.87□□□□□ -0.19
CTSA-213ENST00000606782 FAM133BQ5BKY9 247 aaKnown RBP13.87□□□□□ -0.19
CTSA-213ENST00000606782 PIK3R6Q5UE93 754 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 SPECC1LQ69YQ0 1117 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 TMEM110Q86TL2 294 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 ADIPOR2Q86V24 386 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 TMPRSS6Q8IU80 811 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 FAM71AQ8IYT1 594 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 CLEC4CQ8WTT0 213 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 ZNF606Q8WXB4 792 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 DNASE2BQ8WZ79 361 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 BAP1Q92560 729 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 GOLGA1Q92805 767 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 FOXJ1Q92949 421 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 IQCDQ96DY2 449 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 SLC39A13Q96H72 371 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 MRFAP1L1Q96HT8 127 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 LMLNQ96KR4 655 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 SLC6A17Q9H1V8 727 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 TMEM245Q9H330 911 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 CD93Q9NPY3 652 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 KNL1Q8NG31 2342 aa13.87□□□□□ -0.19
CTSA-213ENST00000606782 USP24Q9UPU5 2620 aa13.86□□□□□ -0.19
CTSA-213ENST00000606782 PCDH15Q96QU1 1955 aa13.86□□□□□ -0.19
CTSA-213ENST00000606782 MED7O43513 233 aa13.86□□□□□ -0.19
CTSA-213ENST00000606782 ACSL4O60488 711 aa13.86□□□□□ -0.19
CTSA-213ENST00000606782 SYNCRIPO60506 623 aaKnown RBP13.86□□□□□ -0.19
CTSA-213ENST00000606782 TSPAN3O60637 253 aa13.86□□□□□ -0.19
CTSA-213ENST00000606782 PRKCHP24723 683 aa13.86□□□□□ -0.19
CTSA-213ENST00000606782 OXTRP30559 389 aa13.86□□□□□ -0.19
CTSA-213ENST00000606782 CLCN1P35523 988 aa13.86□□□□□ -0.19
CTSA-213ENST00000606782 SLC11A2P49281 568 aa13.86□□□□□ -0.19
CTSA-213ENST00000606782 NOVA1P51513 510 aaKnown RBP13.86□□□□□ -0.19
CTSA-213ENST00000606782 EIF4EBP2Q13542 120 aaPredicted RBP13.86□□□□□ -0.19
CTSA-213ENST00000606782 NADSYN1Q6IA69 706 aa13.86□□□□□ -0.19
CTSA-213ENST00000606782 PSAPL1Q6NUJ1 521 aa13.86□□□□□ -0.19
CTSA-213ENST00000606782 KIAA1324Q6UXG2 1013 aaKnown RBP13.86□□□□□ -0.19
CTSA-213ENST00000606782 SCUBE3Q8IX30 993 aa13.86□□□□□ -0.19
CTSA-213ENST00000606782 ZNF557Q8N988 423 aaPredicted RBP13.86□□□□□ -0.19
CTSA-213ENST00000606782 CADM4Q8NFZ8 388 aa13.86□□□□□ -0.19
CTSA-213ENST00000606782 DQX1Q8TE96 717 aaKnown RBP13.86□□□□□ -0.19
CTSA-213ENST00000606782 SORCS1Q8WY21 1168 aa13.86□□□□□ -0.19
CTSA-213ENST00000606782 FCRL2Q96LA5 508 aaPredicted RBP13.86□□□□□ -0.19
CTSA-213ENST00000606782 CIPCQ9C0C6 399 aa13.86□□□□□ -0.19
CTSA-213ENST00000606782 GRPEL1Q9HAV7 217 aa13.86□□□□□ -0.19
CTSA-213ENST00000606782 NLRC4Q9NPP4 1024 aa13.86□□□□□ -0.19
CTSA-213ENST00000606782 CYTH4Q9UIA0 394 aa13.86□□□□□ -0.19
CTSA-213ENST00000606782 MYO6Q9UM54 1294 aa13.86□□□□□ -0.19
CTSA-213ENST00000606782 CAPN11Q9UMQ6 739 aa13.86□□□□□ -0.19
CTSA-213ENST00000606782 TLR6Q9Y2C9 796 aa13.86□□□□□ -0.19
CTSA-213ENST00000606782 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.86□□□□□ -0.19
CTSA-213ENST00000606782 A0A1W2PQJ5 194 aa13.85□□□□□ -0.19
CTSA-213ENST00000606782 F8VZ95 297 aa13.85□□□□□ -0.19
CTSA-213ENST00000606782 PIK3R2O00459 728 aa13.85□□□□□ -0.19
CTSA-213ENST00000606782 PAPSS1O43252 624 aaPredicted RBP13.85□□□□□ -0.19
CTSA-213ENST00000606782 PABPC1P11940 636 aaKnown RBP13.85□□□□□ -0.19
CTSA-213ENST00000606782 KRT5P13647 590 aa13.85□□□□□ -0.19
CTSA-213ENST00000606782 SLC6A4P31645 630 aa13.85□□□□□ -0.19
CTSA-213ENST00000606782 STAT1P42224 750 aa13.85□□□□□ -0.19
CTSA-213ENST00000606782 TPMTP51580 245 aa13.85□□□□□ -0.19
CTSA-213ENST00000606782 SGSHP51688 502 aa13.85□□□□□ -0.19
CTSA-213ENST00000606782 GFPT1Q06210 699 aaPredicted RBP13.85□□□□□ -0.19
CTSA-213ENST00000606782 TBX2Q13207 712 aaPredicted RBP13.85□□□□□ -0.19
CTSA-213ENST00000606782 SEMA3BQ13214 749 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms