RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 RNF8O76064 485 aa16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 CDC25BP30305 580 aa16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 CXCL12P48061 93 aa16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 ATXN1P54253 815 aaKnown RBP16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 MRPS21P82921 87 aaKnown RBP16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 MTAPQ13126 283 aa16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 CDH18Q13634 790 aa16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 SCYL2Q6P3W7 929 aa16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 BNIPLQ7Z465 357 aa16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 TRMT11Q7Z4G4 463 aaKnown RBP16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 ANKS1BQ7Z6G8 1248 aa16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 MFN1Q8IWA4 741 aa16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 PHTF2Q8N3S3 785 aa16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 CARNMT1Q8N4J0 409 aa16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 TC2NQ8N9U0 490 aa16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 RPLP0P6Q8NHW5 317 aa16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 KCNV2Q8TDN2 545 aa16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 WFIKKN2Q8TEU8 576 aa16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 CTNNBL1Q8WYA6 563 aaPredicted RBP16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 CENPIQ92674 756 aaPredicted RBP16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 RPRD1AQ96P16 312 aaPredicted RBP16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 HAPLN3Q96S86 360 aa16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 CHP1Q99653 195 aa16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 NCAPGQ9BPX3 1015 aa16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 ADAM33Q9BZ11 813 aa16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 THAP2Q9H0W7 228 aa16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 CALCOCO1Q9P1Z2 691 aa16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 HS3ST4Q9Y661 456 aa16.56■□□□□ 0.24
PPFIA3-213ENST00000602905 H2AFZP0C0S5 128 aa16.55■□□□□ 0.24
PPFIA3-213ENST00000602905 CISD3P0C7P0 127 aa16.55■□□□□ 0.24
PPFIA3-213ENST00000602905 SGSHP51688 502 aa16.55■□□□□ 0.24
PPFIA3-213ENST00000602905 GALCP54803 685 aa16.55■□□□□ 0.24
PPFIA3-213ENST00000602905 RPS24P62847 133 aaKnown RBP16.55■□□□□ 0.24
PPFIA3-213ENST00000602905 AUHQ13825 339 aaKnown RBP16.55■□□□□ 0.24
PPFIA3-213ENST00000602905 ANGPT1Q15389 498 aa16.55■□□□□ 0.24
PPFIA3-213ENST00000602905 HSF5Q4G112 596 aaPredicted RBP16.55■□□□□ 0.24
PPFIA3-213ENST00000602905 C2orf27AQ580R0 203 aa16.55■□□□□ 0.24
PPFIA3-213ENST00000602905 FBXL22Q6P050 247 aa16.55■□□□□ 0.24
PPFIA3-213ENST00000602905 MAMSTRQ6ZN01 415 aa16.55■□□□□ 0.24
PPFIA3-213ENST00000602905 Q6ZS52 159 aa16.55■□□□□ 0.24
PPFIA3-213ENST00000602905 H2AFVQ71UI9 128 aa16.55■□□□□ 0.24
PPFIA3-213ENST00000602905 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.55■□□□□ 0.24
PPFIA3-213ENST00000602905 CFAP52Q8N1V2 620 aa16.55■□□□□ 0.24
PPFIA3-213ENST00000602905 FNIP1Q8TF40 1166 aa16.55■□□□□ 0.24
PPFIA3-213ENST00000602905 C1orf74Q96LT6 269 aa16.55■□□□□ 0.24
PPFIA3-213ENST00000602905 PRICKLE1Q96MT3 831 aaPredicted RBP16.55■□□□□ 0.24
PPFIA3-213ENST00000602905 PANX2Q96RD6 677 aa16.55■□□□□ 0.24
PPFIA3-213ENST00000602905 PRMT1Q99873 361 aaKnown RBP16.55■□□□□ 0.24
PPFIA3-213ENST00000602905 IMPACTQ9P2X3 320 aa16.55■□□□□ 0.24
PPFIA3-213ENST00000602905 VANGL2Q9ULK5 521 aa16.55■□□□□ 0.24
PPFIA3-213ENST00000602905 DOCK4Q8N1I0 1966 aa16.55■□□□□ 0.24
PPFIA3-213ENST00000602905 A0A1B0GVM2 712 aa16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 TCAF2A6NFQ2 919 aa16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 TMEM191CA6NGB0 347 aa16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 CHURC1-FNTBB4DL54 471 aa16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 TRIM24O15164 1050 aa16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 TIMM44O43615 452 aa16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 LUC7L3O95232 432 aaKnown RBP16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 MOCS3O95396 460 aa16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 COL9A1P20849 921 aa16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 ADRA1BP35368 520 aa16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 TIE1P35590 1138 aa16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 CYLC1P35663 651 aaPredicted RBP16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 PTPN5P54829 565 aa16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 AIF1P55008 147 aa16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 OXCT1P55809 520 aa16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 HDAC4P56524 1084 aa16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 ASTE1Q2TB18 679 aaPredicted RBP16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 SH3PXD2AQ5TCZ1 1133 aa16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 SDE2Q6IQ49 451 aa16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 SLFN11Q7Z7L1 901 aa16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 AHI1Q8N157 1196 aa16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 ZNF513Q8N8E2 541 aaPredicted RBP16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 FIBINQ8TAL6 211 aa16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 USP33Q8TEY7 942 aa16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 EZH1Q92800 747 aaPredicted RBP16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 PPP1R9BQ96SB3 815 aa16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 NUP85Q9BW27 656 aa16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 LUC7LQ9NQ29 371 aaKnown RBP16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 KIAA1522Q9P206 1035 aaPredicted RBP16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 SLC8A2Q9UPR5 921 aa16.54■□□□□ 0.24
PPFIA3-213ENST00000602905 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.53■□□□□ 0.24
PPFIA3-213ENST00000602905 CYP1A2P05177 515 aa16.53■□□□□ 0.24
PPFIA3-213ENST00000602905 PABPC1P11940 636 aaKnown RBP16.53■□□□□ 0.24
PPFIA3-213ENST00000602905 MESP2Q0VG99 397 aa16.53■□□□□ 0.24
PPFIA3-213ENST00000602905 ZNF177Q13360 481 aaPredicted RBP16.53■□□□□ 0.24
PPFIA3-213ENST00000602905 ACAP1Q15027 740 aa16.53■□□□□ 0.24
PPFIA3-213ENST00000602905 EIF4HQ15056 248 aaKnown RBP16.53■□□□□ 0.24
PPFIA3-213ENST00000602905 EFHC2Q5JST6 749 aa16.53■□□□□ 0.24
PPFIA3-213ENST00000602905 EOGTQ5NDL2 527 aa16.53■□□□□ 0.24
PPFIA3-213ENST00000602905 CCDC170Q8IYT3 715 aa16.53■□□□□ 0.24
PPFIA3-213ENST00000602905 SPC24Q8NBT2 197 aa16.53■□□□□ 0.24
PPFIA3-213ENST00000602905 NTAN1Q96AB6 310 aa16.53■□□□□ 0.24
PPFIA3-213ENST00000602905 CIPCQ9C0C6 399 aa16.53■□□□□ 0.24
PPFIA3-213ENST00000602905 ABCB8Q9NUT2 735 aa16.53■□□□□ 0.24
PPFIA3-213ENST00000602905 SPTLC3Q9NUV7 552 aa16.53■□□□□ 0.24
PPFIA3-213ENST00000602905 CTTNBP2NLQ9P2B4 639 aa16.53■□□□□ 0.24
PPFIA3-213ENST00000602905 IP6K2Q9UHH9 426 aa16.53■□□□□ 0.24
PPFIA3-213ENST00000602905 GGA2Q9UJY4 613 aa16.53■□□□□ 0.24
PPFIA3-213ENST00000602905 FBXO4Q9UKT5 387 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms