RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 ZNF33AQ06730 810 aa22.96■■□□□ 1.27
PPFIA3-211ENST00000602848 TMEM240Q5SV17 173 aa22.96■■□□□ 1.27
PPFIA3-211ENST00000602848 TCEAL8Q8IYN2 117 aa22.96■■□□□ 1.27
PPFIA3-211ENST00000602848 GIPC2Q8TF65 315 aa22.96■■□□□ 1.27
PPFIA3-211ENST00000602848 HERVK_113Q902F9 699 aa22.96■■□□□ 1.27
PPFIA3-211ENST00000602848 TRMT2BQ96GJ1 504 aaKnown RBP22.96■■□□□ 1.27
PPFIA3-211ENST00000602848 FCRL2Q96LA5 508 aaPredicted RBP22.96■■□□□ 1.27
PPFIA3-211ENST00000602848 TTC25Q96NG3 672 aa22.96■■□□□ 1.27
PPFIA3-211ENST00000602848 RBM15Q96T37 977 aaKnown RBP eCLIP22.96■■□□□ 1.27
PPFIA3-211ENST00000602848 DONSONQ9NYP3 566 aa22.96■■□□□ 1.27
PPFIA3-211ENST00000602848 MARCH2Q9P0N8 246 aa22.96■■□□□ 1.27
PPFIA3-211ENST00000602848 NR2E3Q9Y5X4 410 aa22.96■■□□□ 1.27
PPFIA3-211ENST00000602848 LILRB3O75022 631 aa22.95■■□□□ 1.26
PPFIA3-211ENST00000602848 FGF18O76093 207 aa22.95■■□□□ 1.26
PPFIA3-211ENST00000602848 SEC24AO95486 1093 aa22.95■■□□□ 1.26
PPFIA3-211ENST00000602848 ELF1P32519 619 aa22.95■■□□□ 1.26
PPFIA3-211ENST00000602848 C10orf120Q5SQS8 335 aa22.95■■□□□ 1.26
PPFIA3-211ENST00000602848 CEP85LQ5SZL2 805 aa22.95■■□□□ 1.26
PPFIA3-211ENST00000602848 MANEALQ5VSG8 457 aa22.95■■□□□ 1.26
PPFIA3-211ENST00000602848 KLHDC10Q6PID8 442 aa22.95■■□□□ 1.26
PPFIA3-211ENST00000602848 CENPUQ71F23 418 aa22.95■■□□□ 1.26
PPFIA3-211ENST00000602848 SP7Q8TDD2 431 aaPredicted RBP22.95■■□□□ 1.26
PPFIA3-211ENST00000602848 TBC1D31Q96DN5 1066 aa22.95■■□□□ 1.26
PPFIA3-211ENST00000602848 RAD9AQ99638 391 aa22.95■■□□□ 1.26
PPFIA3-211ENST00000602848 KLC2Q9H0B6 622 aa22.95■■□□□ 1.26
PPFIA3-211ENST00000602848 CDC42EP4Q9H3Q1 356 aaKnown RBP22.95■■□□□ 1.26
PPFIA3-211ENST00000602848 ZNF638Q14966 1978 aaKnown RBP22.95■■□□□ 1.26
PPFIA3-211ENST00000602848 MSI1O43347 362 aaKnown RBP22.94■■□□□ 1.26
PPFIA3-211ENST00000602848 RNF40O75150 1001 aa22.94■■□□□ 1.26
PPFIA3-211ENST00000602848 CTSAP10619 480 aa22.94■■□□□ 1.26
PPFIA3-211ENST00000602848 ARL4CP56559 192 aa22.94■■□□□ 1.26
PPFIA3-211ENST00000602848 COG7P83436 770 aa22.94■■□□□ 1.26
PPFIA3-211ENST00000602848 ZNF844Q08AG5 666 aa22.94■■□□□ 1.26
PPFIA3-211ENST00000602848 IFFO1Q0D2I5 559 aa22.94■■□□□ 1.26
PPFIA3-211ENST00000602848 EFEMP1Q12805 493 aa22.94■■□□□ 1.26
PPFIA3-211ENST00000602848 SLC29A2Q14542 456 aa22.94■■□□□ 1.26
PPFIA3-211ENST00000602848 VEPH1Q14D04 833 aa22.94■■□□□ 1.26
PPFIA3-211ENST00000602848 STKLD1Q8NE28 680 aa22.94■■□□□ 1.26
PPFIA3-211ENST00000602848 BTN2A3PQ96KV6 586 aa22.94■■□□□ 1.26
PPFIA3-211ENST00000602848 ROPN1BQ9BZX4 212 aaPredicted RBP22.94■■□□□ 1.26
PPFIA3-211ENST00000602848 ROPN1Q9HAT0 212 aaPredicted RBP22.94■■□□□ 1.26
PPFIA3-211ENST00000602848 CYP4F11Q9HBI6 524 aa22.94■■□□□ 1.26
PPFIA3-211ENST00000602848 HBS1LQ9Y450 684 aaKnown RBP22.94■■□□□ 1.26
PPFIA3-211ENST00000602848 WASH4PA8MWX3 477 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 ALOX15BO15296 676 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 IGLV3-27P01718 113 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 MYZAPP0CAP1 466 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 PLD1Q13393 1074 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 SIK2Q9H0K1 926 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 ZBP1Q9H171 429 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 MTIF3Q9H2K0 278 aaKnown RBP22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 PRDM12Q9H4Q4 367 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 TMBIM4Q9HC24 238 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 NUDT5Q9UKK9 219 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 YIPF1Q9Y548 306 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 PTPRSQ13332 1948 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 A0A0A0MRY4 1105 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 OPHN1O60890 802 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 LINC00271P0C7V0 271 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 FDFT1P37268 417 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 MAGEA4P43358 317 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 BASP1P80723 227 aaKnown RBP22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 PPIDQ08752 370 aaKnown RBP22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 GALNT2Q10471 571 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 KCNJ11Q14654 390 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 HIF1AQ16665 826 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 HERC6Q8IVU3 1022 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 HDAC11Q96DB2 347 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 SPATA13Q96N96 652 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 PPARGC1AQ9UBK2 798 aaKnown RBP22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 UXTQ9UBK9 157 aaPredicted RBP22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 MAGED2Q9UNF1 606 aaPredicted RBP22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 LZTS1Q9Y250 596 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 MFHAS1Q9Y4C4 1052 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 SLC4A7Q9Y6M7 1214 aa22.93■■□□□ 1.26
PPFIA3-211ENST00000602848 HMGB1P1B2RPK0 211 aaPredicted RBP22.92■■□□□ 1.26
PPFIA3-211ENST00000602848 TLR5O60602 858 aa22.92■■□□□ 1.26
PPFIA3-211ENST00000602848 ABHD2P08910 425 aa22.92■■□□□ 1.26
PPFIA3-211ENST00000602848 HMGA1P17096 107 aaKnown RBP22.92■■□□□ 1.26
PPFIA3-211ENST00000602848 ATP5C1P36542 298 aaKnown RBP22.92■■□□□ 1.26
PPFIA3-211ENST00000602848 TUBP50607 506 aa22.92■■□□□ 1.26
PPFIA3-211ENST00000602848 NUGGCQ68CJ6 796 aa22.92■■□□□ 1.26
PPFIA3-211ENST00000602848 LRRC49Q8IUZ0 686 aa22.92■■□□□ 1.26
PPFIA3-211ENST00000602848 EXOC4Q96A65 974 aa22.92■■□□□ 1.26
PPFIA3-211ENST00000602848 RAB6BQ9NRW1 208 aa22.92■■□□□ 1.26
PPFIA3-211ENST00000602848 TRPM5Q9NZQ8 1165 aa22.92■■□□□ 1.26
PPFIA3-211ENST00000602848 XPO7Q9UIA9 1087 aaKnown RBP22.92■■□□□ 1.26
PPFIA3-211ENST00000602848 DNMT3LQ9UJW3 386 aa22.92■■□□□ 1.26
PPFIA3-211ENST00000602848 HS3ST4Q9Y661 456 aa22.92■■□□□ 1.26
PPFIA3-211ENST00000602848 KIAA1671Q9BY89 1806 aa22.91■■□□□ 1.26
PPFIA3-211ENST00000602848 E7ESA3 106 aa22.91■■□□□ 1.26
PPFIA3-211ENST00000602848 PRRG1O14668 218 aa22.91■■□□□ 1.26
PPFIA3-211ENST00000602848 MAP3K6O95382 1288 aa22.91■■□□□ 1.26
PPFIA3-211ENST00000602848 SRGAP2BP0DMP2 458 aa22.91■■□□□ 1.26
PPFIA3-211ENST00000602848 TSHRP16473 764 aa22.91■■□□□ 1.26
PPFIA3-211ENST00000602848 EPHB3P54753 998 aa22.91■■□□□ 1.26
PPFIA3-211ENST00000602848 AP1B1Q10567 949 aa22.91■■□□□ 1.26
PPFIA3-211ENST00000602848 TAF12Q16514 161 aa22.91■■□□□ 1.26
PPFIA3-211ENST00000602848 AGBL2Q5U5Z8 902 aa22.91■■□□□ 1.26
PPFIA3-211ENST00000602848 LRRC31Q6UY01 552 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms