RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 PHTF2Q8N3S3 785 aa14.36□□□□□ -0.11
RNF40-212ENST00000602784 NIPA2Q8N8Q9 360 aa14.36□□□□□ -0.11
RNF40-212ENST00000602784 ARHGEF26Q96DR7 871 aa14.36□□□□□ -0.11
RNF40-212ENST00000602784 P2RY11Q96G91 374 aa14.36□□□□□ -0.11
RNF40-212ENST00000602784 EIF3CQ99613 913 aaKnown RBP14.36□□□□□ -0.11
RNF40-212ENST00000602784 IER2Q9BTL4 223 aa14.36□□□□□ -0.11
RNF40-212ENST00000602784 NUP85Q9BW27 656 aa14.36□□□□□ -0.11
RNF40-212ENST00000602784 PACSIN1Q9BY11 444 aa14.36□□□□□ -0.11
RNF40-212ENST00000602784 TRIM7Q9C029 511 aa14.36□□□□□ -0.11
RNF40-212ENST00000602784 OSBPL2Q9H1P3 480 aa14.36□□□□□ -0.11
RNF40-212ENST00000602784 LUC7LQ9NQ29 371 aaKnown RBP14.36□□□□□ -0.11
RNF40-212ENST00000602784 ANLNQ9NQW6 1124 aa14.36□□□□□ -0.11
RNF40-212ENST00000602784 DNAJC17Q9NVM6 304 aaKnown RBP14.36□□□□□ -0.11
RNF40-212ENST00000602784 NDRG2Q9UN36 371 aaKnown RBP14.36□□□□□ -0.11
RNF40-212ENST00000602784 SLC27A6Q9Y2P4 619 aa14.36□□□□□ -0.11
RNF40-212ENST00000602784 HS3ST4Q9Y661 456 aa14.36□□□□□ -0.11
RNF40-212ENST00000602784 MYO1FO00160 1098 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 PI15O43692 258 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 TSPAN3O60637 253 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 KAT7O95251 611 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 NDUFA10O95299 355 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 APODP05090 189 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 TNFRSF4P43489 277 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 NUBP1P53384 320 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 ZNF252P-AS1Q0IIN9 211 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 RAB6CQ53S08 254 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 RABGAP1LQ5R372 815 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 NAIF1Q69YI7 327 aaPredicted RBP14.35□□□□□ -0.11
RNF40-212ENST00000602784 GRAMD4Q6IC98 578 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 FBXL22Q6P050 247 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 MAMSTRQ6ZN01 415 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 TMEM139Q8IV31 216 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 NAT16Q8N8M0 369 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 KCNV2Q8TDN2 545 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 BHMTQ93088 406 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 PRICKLE1Q96MT3 831 aaPredicted RBP14.35□□□□□ -0.11
RNF40-212ENST00000602784 LRFN3Q9BTN0 628 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 SIK2Q9H0K1 926 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 RAB6CQ9H0N0 254 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 LMAN1LQ9HAT1 526 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 ARHGEF4Q9NR80 690 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 PLK2Q9NYY3 685 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 DLGAP2Q9P1A6 1054 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 CTTNBP2NLQ9P2B4 639 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 IP6K2Q9UHH9 426 aa14.35□□□□□ -0.11
RNF40-212ENST00000602784 IGLV3-10A0A075B6K4 115 aa14.34□□□□□ -0.11
RNF40-212ENST00000602784 SOWAHDA6NJG2 315 aa14.34□□□□□ -0.11
RNF40-212ENST00000602784 DRGXA6NNA5 263 aa14.34□□□□□ -0.11
RNF40-212ENST00000602784 TBL1XO60907 577 aa14.34□□□□□ -0.11
RNF40-212ENST00000602784 MTA2O94776 668 aa14.34□□□□□ -0.11
RNF40-212ENST00000602784 IPO7O95373 1038 aaKnown RBP14.34□□□□□ -0.11
RNF40-212ENST00000602784 AVPR2P30518 371 aa14.34□□□□□ -0.11
RNF40-212ENST00000602784 PCK1P35558 622 aa14.34□□□□□ -0.11
RNF40-212ENST00000602784 MAGEA1P43355 309 aa14.34□□□□□ -0.11
RNF40-212ENST00000602784 DGKGP49619 791 aa14.34□□□□□ -0.11
RNF40-212ENST00000602784 SGSHP51688 502 aa14.34□□□□□ -0.11
RNF40-212ENST00000602784 RPS24P62847 133 aaKnown RBP14.34□□□□□ -0.11
RNF40-212ENST00000602784 LRRC31Q6UY01 552 aa14.34□□□□□ -0.11
RNF40-212ENST00000602784 SLFN11Q7Z7L1 901 aa14.34□□□□□ -0.11
RNF40-212ENST00000602784 PSTKQ8IV42 348 aaKnown RBP14.34□□□□□ -0.11
RNF40-212ENST00000602784 RHOT2Q8IXI1 618 aa14.34□□□□□ -0.11
RNF40-212ENST00000602784 ZNF683Q8IZ20 524 aa14.34□□□□□ -0.11
RNF40-212ENST00000602784 ARFGAP1Q8N6T3 406 aa14.34□□□□□ -0.11
RNF40-212ENST00000602784 TERB1Q8NA31 727 aa14.34□□□□□ -0.11
RNF40-212ENST00000602784 FIBINQ8TAL6 211 aa14.34□□□□□ -0.11
RNF40-212ENST00000602784 ZNF564Q8TBZ8 553 aaPredicted RBP14.34□□□□□ -0.11
RNF40-212ENST00000602784 MYEOVQ96EZ4 313 aa14.34□□□□□ -0.11
RNF40-212ENST00000602784 RETREG1Q9H6L5 497 aa14.34□□□□□ -0.11
RNF40-212ENST00000602784 OR12D3Q9UGF7 316 aa14.34□□□□□ -0.11
RNF40-212ENST00000602784 ANAPC7Q9UJX3 599 aa14.34□□□□□ -0.11
RNF40-212ENST00000602784 PCDHA13Q9Y5I0 950 aa14.34□□□□□ -0.11
RNF40-212ENST00000602784 KIAA1549LQ6ZVL6 1849 aa14.34□□□□□ -0.11
RNF40-212ENST00000602784 A0A1B0GVM2 712 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 TBC1D3BA6NDS4 549 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 TCAF2A6NFQ2 919 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 K7EQS6 105 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 TIMM44O43615 452 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 CLDN11O75508 207 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 EGFP01133 1207 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 DCNP07585 359 aaKnown RBP14.33□□□□□ -0.12
RNF40-212ENST00000602784 ARHGAP25P42331 645 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 OXCT1P55809 520 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 MESP2Q0VG99 397 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 ARTNQ5T4W7 220 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 SCYL2Q6P3W7 929 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 RAD9BQ6WBX8 426 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 CHST9Q7L1S5 443 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 KIAA0907Q7Z7F0 614 aaPredicted RBP14.33□□□□□ -0.12
RNF40-212ENST00000602784 C14orf80Q86SX3 495 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 CCDC117Q8IWD4 279 aaPredicted RBP14.33□□□□□ -0.12
RNF40-212ENST00000602784 CCDC185Q8N715 623 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.33□□□□□ -0.12
RNF40-212ENST00000602784 TMEM105Q8N8V8 129 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 CCDC112Q8NEF3 446 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 SLC35G2Q8TBE7 412 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 RFFLQ8WZ73 363 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 EZH1Q92800 747 aaPredicted RBP14.33□□□□□ -0.12
RNF40-212ENST00000602784 RPRD1AQ96P16 312 aaPredicted RBP14.33□□□□□ -0.12
RNF40-212ENST00000602784 CHRDQ9H2X0 955 aa14.33□□□□□ -0.12
RNF40-212ENST00000602784 TMPRSS4Q9NRS4 437 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms