RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 ARL13BQ3SXY8 428 aa10.44□□□□□ -0.74
UPF1-213ENST00000601981 BRMS1LQ5PSV4 323 aa10.44□□□□□ -0.74
UPF1-213ENST00000601981 ACBD5Q5T8D3 534 aaPredicted RBP10.44□□□□□ -0.74
UPF1-213ENST00000601981 LRRC38Q5VT99 294 aa10.44□□□□□ -0.74
UPF1-213ENST00000601981 CPNE8Q86YQ8 564 aa10.44□□□□□ -0.74
UPF1-213ENST00000601981 ATP6V0D2Q8N8Y2 350 aa10.44□□□□□ -0.74
UPF1-213ENST00000601981 ST13P5Q8NFI4 369 aaPredicted RBP10.44□□□□□ -0.74
UPF1-213ENST00000601981 ADAM32Q8TC27 787 aa10.44□□□□□ -0.74
UPF1-213ENST00000601981 HNRNPLLQ8WVV9 542 aaKnown RBP10.44□□□□□ -0.74
UPF1-213ENST00000601981 RXFP2Q8WXD0 754 aa10.44□□□□□ -0.74
UPF1-213ENST00000601981 RSPRY1Q96DX4 576 aa10.44□□□□□ -0.74
UPF1-213ENST00000601981 PGAP3Q96FM1 320 aaPredicted RBP10.44□□□□□ -0.74
UPF1-213ENST00000601981 MSANTD3Q96H12 275 aa10.44□□□□□ -0.74
UPF1-213ENST00000601981 RPP25Q9BUL9 199 aaKnown RBP10.44□□□□□ -0.74
UPF1-213ENST00000601981 PLA2G2FQ9BZM2 168 aa10.44□□□□□ -0.74
UPF1-213ENST00000601981 TRPV5Q9NQA5 729 aa10.44□□□□□ -0.74
UPF1-213ENST00000601981 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.44□□□□□ -0.74
UPF1-213ENST00000601981 COX16Q9P0S2 106 aa10.44□□□□□ -0.74
UPF1-213ENST00000601981 RAPGEFL1Q9UHV5 662 aa10.44□□□□□ -0.74
UPF1-213ENST00000601981 MUTYHQ9UIF7 546 aa10.44□□□□□ -0.74
UPF1-213ENST00000601981 C2CD4BA6NLJ0 364 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 RNF8O76064 485 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 GJB6O95452 261 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 CYBBP04839 570 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 PYGMP11217 842 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 GLULP15104 373 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 PSMA2P25787 234 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 TNFRSF8P28908 595 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 RDXP35241 583 aaKnown RBP10.43□□□□□ -0.74
UPF1-213ENST00000601981 ZNF143P52747 638 aaPredicted RBP10.43□□□□□ -0.74
UPF1-213ENST00000601981 VSNL1P62760 191 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 ZNF252P-AS1Q0IIN9 211 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 ZNF211Q13398 564 aaPredicted RBP10.43□□□□□ -0.74
UPF1-213ENST00000601981 RUNX3Q13761 415 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 PPP2R5DQ14738 602 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 ACAP1Q15027 740 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 PREPLQ4J6C6 727 aaPredicted RBP10.43□□□□□ -0.74
UPF1-213ENST00000601981 TMCO3Q6UWJ1 677 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 STRADAQ7RTN6 431 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 DENND1CQ8IV53 801 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 KATNAL2Q8IYT4 538 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 EMC1Q8N766 993 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 MAIP1Q8WWC4 291 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 KHSRPQ92945 711 aaKnown RBP eCLIP10.43□□□□□ -0.747e-7■■■□□ 17
UPF1-213ENST00000601981 AZIN2Q96A70 460 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 SHDQ96IW2 340 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 BTN2A3PQ96KV6 586 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 CFAP57Q96MR6 1250 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 KRT12Q99456 494 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 NPY6RQ99463 290 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 FAM83CQ9BQN1 747 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 CNPY3Q9BT09 278 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 LRRC1Q9BTT6 524 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 C1QTNF1Q9BXJ1 281 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 EBF3Q9H4W6 596 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 WDCPQ9H6R7 721 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 C8orf33Q9H7E9 229 aaPredicted RBP10.43□□□□□ -0.74
UPF1-213ENST00000601981 STIM2Q9P246 746 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 WNT16Q9UBV4 365 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 WNT6Q9Y6F9 365 aa10.43□□□□□ -0.74
UPF1-213ENST00000601981 COL4A2P08572 1712 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 MAN2B1O00754 1011 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 NARSO43776 548 aaKnown RBP10.42□□□□□ -0.74
UPF1-213ENST00000601981 MOCS2O96007 188 aaPredicted RBP10.42□□□□□ -0.74
UPF1-213ENST00000601981 IGLV3-25P01717 112 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 IGLV3-27P01718 113 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 RFC1P35251 1148 aaPredicted RBP10.42□□□□□ -0.74
UPF1-213ENST00000601981 MLLT6P55198 1093 aaPredicted RBP10.42□□□□□ -0.74
UPF1-213ENST00000601981 TAS2R40P59535 323 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 ZXDAP98168 799 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 ZXDBP98169 803 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 ATP11AP98196 1134 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 OGDHQ02218 1023 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 PRKCQQ04759 706 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 GAD2Q05329 585 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 SIGLEC14Q08ET2 396 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 CDO1Q16878 200 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 EML3Q32P44 896 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 MAP9Q49MG5 647 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 ADGRF1Q5T601 910 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 Q6ZNB5 142 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 POLNQ7Z5Q5 900 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 SLC13A5Q86YT5 568 aaPredicted RBP10.42□□□□□ -0.74
UPF1-213ENST00000601981 CCDC117Q8IWD4 279 aaPredicted RBP10.42□□□□□ -0.74
UPF1-213ENST00000601981 BBS7Q8IWZ6 715 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 CPXM2Q8N436 756 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 EXD1Q8NHP7 514 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 JOSD2Q8TAC2 188 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 EDAQ92838 391 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 NT5C3BQ969T7 300 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 ZFYVE19Q96K21 471 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 FCRL2Q96LA5 508 aaPredicted RBP10.42□□□□□ -0.74
UPF1-213ENST00000601981 RUNDC3BQ96NL0 473 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 LRRC3BQ96PB8 259 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 TBCBQ99426 244 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 AP1M1Q9BXS5 423 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 ECT2Q9H8V3 914 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 ARFGAP3Q9NP61 516 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 CD320Q9NPF0 282 aa10.42□□□□□ -0.74
UPF1-213ENST00000601981 DDX56Q9NY93 547 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms