RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 MAP3K6O95382 1288 aa18.21■□□□□ 0.5
SHKBP1-224ENST00000600718 MOCS2O96007 188 aaPredicted RBP18.21■□□□□ 0.5
SHKBP1-224ENST00000600718 SPATA31D3P0C874 917 aa18.21■□□□□ 0.5
SHKBP1-224ENST00000600718 SRGAP2BP0DMP2 458 aa18.21■□□□□ 0.5
SHKBP1-224ENST00000600718 HOXC13P31276 330 aa18.21■□□□□ 0.5
SHKBP1-224ENST00000600718 TUBP50607 506 aa18.21■□□□□ 0.5
SHKBP1-224ENST00000600718 MANEALQ5VSG8 457 aa18.21■□□□□ 0.5
SHKBP1-224ENST00000600718 HIBCHQ6NVY1 386 aaPredicted RBP18.21■□□□□ 0.5
SHKBP1-224ENST00000600718 C4orf22Q6V702 233 aa18.21■□□□□ 0.5
SHKBP1-224ENST00000600718 SPATA31D4Q6ZUB0 917 aa18.21■□□□□ 0.5
SHKBP1-224ENST00000600718 TFB1MQ8WVM0 346 aaKnown RBP18.21■□□□□ 0.5
SHKBP1-224ENST00000600718 TBC1D31Q96DN5 1066 aa18.21■□□□□ 0.5
SHKBP1-224ENST00000600718 BTN2A3PQ96KV6 586 aa18.21■□□□□ 0.5
SHKBP1-224ENST00000600718 C17orf80Q9BSJ5 609 aa18.21■□□□□ 0.5
SHKBP1-224ENST00000600718 ADAM7Q9H2U9 754 aa18.21■□□□□ 0.5
SHKBP1-224ENST00000600718 TLR9Q9NR96 1032 aa18.21■□□□□ 0.5
SHKBP1-224ENST00000600718 HS3ST4Q9Y661 456 aa18.21■□□□□ 0.5
SHKBP1-224ENST00000600718 ZNF638Q14966 1978 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-224ENST00000600718 MKI67P46013 3256 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-224ENST00000600718 C2orf71A6NGG8 1288 aa18.2■□□□□ 0.5
SHKBP1-224ENST00000600718 NCAM2O15394 837 aa18.2■□□□□ 0.5
SHKBP1-224ENST00000600718 FGF10O15520 208 aaPredicted RBP18.2■□□□□ 0.5
SHKBP1-224ENST00000600718 LPXNO60711 386 aa18.2■□□□□ 0.5
SHKBP1-224ENST00000600718 SERPINB6P35237 376 aa18.2■□□□□ 0.5
SHKBP1-224ENST00000600718 ACTN2P35609 894 aa18.2■□□□□ 0.5
SHKBP1-224ENST00000600718 DHX9Q08211 1270 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-224ENST00000600718 PABPC1LQ4VXU2 614 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-224ENST00000600718 C9orf50Q5SZB4 431 aa18.2■□□□□ 0.5
SHKBP1-224ENST00000600718 B4GALNT4Q76KP1 1039 aa18.2■□□□□ 0.5
SHKBP1-224ENST00000600718 TMC3Q7Z5M5 1100 aa18.2■□□□□ 0.5
SHKBP1-224ENST00000600718 TSEN2Q8NCE0 465 aaKnown RBP18.2■□□□□ 0.5
SHKBP1-224ENST00000600718 FOXP3Q9BZS1 431 aa18.2■□□□□ 0.5
SHKBP1-224ENST00000600718 CATSPERBQ9H7T0 1116 aa18.2■□□□□ 0.5
SHKBP1-224ENST00000600718 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 PPP1R12AO14974 1030 aaPredicted RBP18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 PPFIA2O75334 1257 aa18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 PLPP4Q5VZY2 271 aa18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 ALS2CLQ60I27 953 aa18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 NUGGCQ68CJ6 796 aa18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 RWDD4Q6NW29 188 aaKnown RBP18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 KREMEN2Q8NCW0 462 aa18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 SAMD11Q96NU1 681 aa18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 FERMT1Q9BQL6 677 aa18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 TXLNGYQ9BZA5 131 aa18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 NACA2Q9H009 215 aa18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 BRD8Q9H0E9 1235 aa18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 PAK5Q9P286 719 aa18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 XPO7Q9UIA9 1087 aaKnown RBP18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 E9PAM4 449 aa18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 C1RP00736 705 aa18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 MYOGP15173 224 aa18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 DNAJB1P25685 340 aa18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 GGCXP38435 758 aa18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 MAGEA10P43363 369 aaPredicted RBP18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 COG7P83436 770 aa18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 SLMAPQ14BN4 828 aa18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 MORF4L2Q15014 288 aa18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 SHHQ15465 462 aa18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 SPDYCQ5MJ68 293 aa18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 NEU3Q9UQ49 428 aa18.19■□□□□ 0.5
SHKBP1-224ENST00000600718 PLXNA4Q9HCM2 1894 aa18.18■□□□□ 0.5
SHKBP1-224ENST00000600718 HIDE1A8MVS5 230 aa18.18■□□□□ 0.5
SHKBP1-224ENST00000600718 COCHO43405 550 aa18.18■□□□□ 0.5
SHKBP1-224ENST00000600718 GLUD1P00367 558 aa18.18■□□□□ 0.5
SHKBP1-224ENST00000600718 LRG1P02750 347 aa18.18■□□□□ 0.5
SHKBP1-224ENST00000600718 HMBSP08397 361 aa18.18■□□□□ 0.5
SHKBP1-224ENST00000600718 MX2P20592 715 aa18.18■□□□□ 0.5
SHKBP1-224ENST00000600718 PRKD1Q15139 912 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-224ENST00000600718 MS4A13Q5J8X5 152 aa18.18■□□□□ 0.5
SHKBP1-224ENST00000600718 ARTNQ5T4W7 220 aa18.18■□□□□ 0.5
SHKBP1-224ENST00000600718 RNASEH2BQ5TBB1 312 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-224ENST00000600718 PIK3R6Q5UE93 754 aa18.18■□□□□ 0.5
SHKBP1-224ENST00000600718 HEATR6Q6AI08 1181 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-224ENST00000600718 LRRC31Q6UY01 552 aa18.18■□□□□ 0.5
SHKBP1-224ENST00000600718 CEP128Q6ZU80 1094 aa18.18■□□□□ 0.5
SHKBP1-224ENST00000600718 RTL10Q7L3V2 364 aa18.18■□□□□ 0.5
SHKBP1-224ENST00000600718 LZTR1Q8N653 840 aa18.18■□□□□ 0.5
SHKBP1-224ENST00000600718 MICAL1Q8TDZ2 1067 aa18.18■□□□□ 0.5
SHKBP1-224ENST00000600718 ABHD8Q96I13 439 aa18.18■□□□□ 0.5
SHKBP1-224ENST00000600718 C5orf60A6NFR6 353 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 GRXCR1A8MXD5 290 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 SMAPO00193 183 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 GCATO75600 419 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 F11P03951 625 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 C14orf80Q86SX3 495 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 PPIL6Q8IXY8 311 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 HTR3CQ8WXA8 447 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 PRDM12Q9H4Q4 367 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 PPARGC1AQ9UBK2 798 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 ATP8A1Q9Y2Q0 1164 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 PCDHA11Q9Y5I1 949 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 WASH4PA8MWX3 477 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 OAS1P00973 400 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 C8AP07357 584 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 HSD17B3P37058 310 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 PMS2P54278 862 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 GALNT2Q10471 571 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 GPS2Q13227 327 aa18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 AUHQ13825 339 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-224ENST00000600718 CFAP58Q5T655 872 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms