RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 IGF2RP11717 2491 aa16.78■□□□□ 0.28
LSM4-206ENST00000600289 DOCK4Q8N1I0 1966 aa16.78■□□□□ 0.28
LSM4-206ENST00000600289 ITIH6Q6UXX5 1313 aa16.77■□□□□ 0.28
LSM4-206ENST00000600289 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.77■□□□□ 0.28
LSM4-206ENST00000600289 PRRT4C9JH25 899 aa16.77■□□□□ 0.28
LSM4-206ENST00000600289 HNRNPLP14866 589 aaKnown RBP eCLIP16.77■□□□□ 0.28
LSM4-206ENST00000600289 NSFP46459 744 aaKnown RBP16.77■□□□□ 0.28
LSM4-206ENST00000600289 ARID5AQ03989 594 aa16.77■□□□□ 0.28
LSM4-206ENST00000600289 E2F5Q15329 346 aa16.77■□□□□ 0.28
LSM4-206ENST00000600289 SLC25A52Q3SY17 297 aa16.77■□□□□ 0.28
LSM4-206ENST00000600289 ZC3H12AQ5D1E8 599 aaKnown RBP16.77■□□□□ 0.28
LSM4-206ENST00000600289 MS4A13Q5J8X5 152 aa16.77■□□□□ 0.28
LSM4-206ENST00000600289 EOGTQ5NDL2 527 aa16.77■□□□□ 0.28
LSM4-206ENST00000600289 MMS22LQ6ZRQ5 1243 aa16.77■□□□□ 0.28
LSM4-206ENST00000600289 ANKS1BQ7Z6G8 1248 aa16.77■□□□□ 0.28
LSM4-206ENST00000600289 KIAA0907Q7Z7F0 614 aaPredicted RBP16.77■□□□□ 0.28
LSM4-206ENST00000600289 ZNF513Q8N8E2 541 aaPredicted RBP16.77■□□□□ 0.28
LSM4-206ENST00000600289 BHMTQ93088 406 aa16.77■□□□□ 0.28
LSM4-206ENST00000600289 PRICKLE1Q96MT3 831 aaPredicted RBP16.77■□□□□ 0.28
LSM4-206ENST00000600289 NUCKS1Q9H1E3 243 aaKnown RBP16.77■□□□□ 0.28
LSM4-206ENST00000600289 EBF1Q9UH73 591 aa16.77■□□□□ 0.28
LSM4-206ENST00000600289 SLC12A6Q9UHW9 1150 aa16.77■□□□□ 0.28
LSM4-206ENST00000600289 HCN2Q9UL51 889 aa16.77■□□□□ 0.28
LSM4-206ENST00000600289 ANTXRLA6NF34 631 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 NPC1O15118 1278 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 APBB3O95704 486 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 F9P00740 461 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 CALB1P05937 261 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 TIE1P35590 1138 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 FLT3P36888 993 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 CXCR3P49682 368 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 DGKEP52429 567 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 C1QBPQ07021 282 aaKnown RBP16.76■□□□□ 0.27
LSM4-206ENST00000600289 ASIC2Q16515 512 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 CRY1Q16526 586 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 BRMS1LQ5PSV4 323 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 SFMBT2Q5VUG0 894 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 MON1BQ7L1V2 547 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 RASSF3Q86WH2 238 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 ALLCQ8N6M5 410 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 WFIKKN2Q8TEU8 576 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 SYN2Q92777 582 aaPredicted RBP16.76■□□□□ 0.27
LSM4-206ENST00000600289 PRMT1Q99873 361 aaKnown RBP16.76■□□□□ 0.27
LSM4-206ENST00000600289 C11orf70Q9BRQ4 267 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 ADAM33Q9BZ11 813 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 IFNKQ9P0W0 207 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 CALCOCO1Q9P1Z2 691 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 GMEB2Q9UKD1 530 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 CLEC4EQ9ULY5 219 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 PAXBP1Q9Y5B6 917 aa16.76■□□□□ 0.27
LSM4-206ENST00000600289 DSPP15924 2871 aaKnown RBP16.75■□□□□ 0.27
LSM4-206ENST00000600289 GOLGA6L7A0A1B0GV03 622 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 TYW5A2RUC4 315 aaKnown RBP16.75■□□□□ 0.27
LSM4-206ENST00000600289 GOLGA8SH3BPF8 625 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 M0QYT0 321 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 SGK1O00141 431 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 TSPAN3O60637 253 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 ADAM23O75077 832 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 ENDOD1O94919 500 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 KLF8O95600 359 aaPredicted RBP16.75■□□□□ 0.27
LSM4-206ENST00000600289 TPM3P06753 285 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 ABCB4P21439 1286 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 TACR2P21452 398 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 NTSR1P30989 418 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 FNTBP49356 437 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 SGSHP51688 502 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 ENPP2Q13822 863 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 GEN1Q17RS7 908 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 C2CD6Q53TS8 623 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 ACBD5Q5T8D3 534 aaPredicted RBP16.75■□□□□ 0.27
LSM4-206ENST00000600289 N4BP2L1Q5TBK1 243 aaPredicted RBP16.75■□□□□ 0.27
LSM4-206ENST00000600289 EMC10Q5UCC4 262 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 TTC39BQ5VTQ0 682 aaPredicted RBP16.75■□□□□ 0.27
LSM4-206ENST00000600289 E4F1Q66K89 784 aaPredicted RBP16.75■□□□□ 0.27
LSM4-206ENST00000600289 TRNP1Q6NT89 227 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 RFWD3Q6PCD5 774 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 TXNDC5Q8NBS9 432 aaKnown RBP16.75■□□□□ 0.27
LSM4-206ENST00000600289 C3orf20Q8ND61 904 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 SLC30A5Q8TAD4 765 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 GABRG3Q99928 467 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 METTL5Q9NRN9 209 aaKnown RBP16.75■□□□□ 0.27
LSM4-206ENST00000600289 PIGVQ9NUD9 493 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 ARHGEF38Q9NXL2 777 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 ADAM22Q9P0K1 906 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 ZMIZ1Q9ULJ6 1067 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 SPAG17Q6Q759 2223 aa16.75■□□□□ 0.27
LSM4-206ENST00000600289 LOC400499M0QZD8 3231 aa16.74■□□□□ 0.27
LSM4-206ENST00000600289 TCRBV5S1A1TA0A578 114 aa16.74■□□□□ 0.27
LSM4-206ENST00000600289 TIMM44O43615 452 aa16.74■□□□□ 0.27
LSM4-206ENST00000600289 TBL1XO60907 577 aa16.74■□□□□ 0.27
LSM4-206ENST00000600289 MOCS2O96007 188 aaPredicted RBP16.74■□□□□ 0.27
LSM4-206ENST00000600289 HLA-FP30511 346 aa16.74■□□□□ 0.27
LSM4-206ENST00000600289 SULT1E1P49888 294 aa16.74■□□□□ 0.27
LSM4-206ENST00000600289 EGFLAMQ63HQ2 1017 aa16.74■□□□□ 0.27
LSM4-206ENST00000600289 ACAD10Q6JQN1 1059 aa16.74■□□□□ 0.27
LSM4-206ENST00000600289 CHSY1Q86X52 802 aa16.74■□□□□ 0.27
LSM4-206ENST00000600289 AHI1Q8N157 1196 aa16.74■□□□□ 0.27
LSM4-206ENST00000600289 CCDC33Q8N5R6 958 aa16.74■□□□□ 0.27
LSM4-206ENST00000600289 TSTD1Q8NFU3 115 aa16.74■□□□□ 0.27
LSM4-206ENST00000600289 FIBINQ8TAL6 211 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms