RNA–Protein interactions for RNA: ENST00000599848.5

UPF1-207, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 1 (best) BASIC

Gene UPF1, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-207ENST00000599848 RERGQ96A58 199 aaPredicted RBP20.92■□□□□ 0.94
UPF1-207ENST00000599848 DPY30Q9C005 99 aa20.92■□□□□ 0.94
UPF1-207ENST00000599848 RNF103O00237 685 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 AKAP5P24588 427 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 MMP13P45452 471 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 IL2P60568 153 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 A1CFQ9NQ94 594 aaKnown RBP20.91■□□□□ 0.94
UPF1-207ENST00000599848 FTH1P02794 183 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 GSTM1P09488 218 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 ZBTB48P10074 688 aaPredicted RBP20.91■□□□□ 0.94
UPF1-207ENST00000599848 COPAP53621 1224 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 OTUD4Q01804 1114 aaKnown RBP20.91■□□□□ 0.94
UPF1-207ENST00000599848 ACTN3Q08043 901 aaPredicted RBP20.91■□□□□ 0.94
UPF1-207ENST00000599848 SPANXN3Q5MJ09 141 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 CXCL17Q6UXB2 119 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 GAS2L3Q86XJ1 694 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 ARIH1Q9Y4X5 557 aaPredicted RBP20.91■□□□□ 0.94
UPF1-207ENST00000599848 PTCH2Q9Y6C5 1203 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 ERBB2P04626 1255 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 ALDH9A1P49189 494 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 ZDHHC20Q5W0Z9 365 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 SCARA3Q6AZY7 606 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 STRA8Q7Z7C7 330 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 INPP5DQ92835 1189 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 SGF29Q96ES7 293 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 REXO5Q96IC2 774 aaKnown RBP20.91■□□□□ 0.94
UPF1-207ENST00000599848 S100A13Q99584 98 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 ATAD3AQ9NVI7 634 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 USP1O94782 785 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 NFATC1O95644 943 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 RGS1Q08116 209 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 DGKZQ13574 1117 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 TOMM20Q15388 145 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 LONRF1Q17RB8 773 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 GALNTL6Q49A17 601 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 PPP1R15BQ5SWA1 713 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 SEL1L3Q68CR1 1132 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 KRT73Q86Y46 540 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 COLGALT1Q8NBJ5 622 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 HSFY1Q96LI6 401 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 PGLYRP2Q96PD5 576 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 COL1A2P08123 1366 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 SMIM10L2AP0DMW4 78 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 SMIM10L2BP0DMW5 78 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 RARRES1P49788 294 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 SLC6A3Q01959 620 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 BIKQ13323 160 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 CYB5D1Q6P9G0 228 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 DOK6Q6PKX4 331 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 TPCN2Q8NHX9 752 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 GAD1Q99259 594 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 ZDHHC6Q9H6R6 413 aa20.91■□□□□ 0.94
UPF1-207ENST00000599848 MRTO4Q9UKD2 239 aaKnown RBP20.91■□□□□ 0.94
UPF1-207ENST00000599848 FOXN3O00409 490 aaPredicted RBP20.9■□□□□ 0.94
UPF1-207ENST00000599848 COX7A2P14406 83 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 MARSP56192 900 aaKnown RBP20.9■□□□□ 0.94
UPF1-207ENST00000599848 GRTP1Q5TC63 336 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 SLC26A11Q86WA9 606 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 GALNT8Q9NY28 637 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.9■□□□□ 0.94
UPF1-207ENST00000599848 SGPL1O95470 568 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 RAD23AP54725 363 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 BNC1Q01954 994 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 NR6A1Q15406 480 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 FAM110CQ1W6H9 321 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 EPC2Q52LR7 807 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 PAGE2Q7Z2X7 111 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 CNBD2Q96M20 576 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 HIPK3Q9H422 1215 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 WWP2O00308 870 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 CCNT2O60583 730 aaKnown RBP20.9■□□□□ 0.94
UPF1-207ENST00000599848 RECQL4O94761 1208 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 CXCL14O95715 111 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 CYP3A4P08684 503 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 GPR1P46091 355 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 NFYCQ13952 458 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 ANGPT1Q15389 498 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 LRRC23Q53EV4 343 aaPredicted RBP20.9■□□□□ 0.94
UPF1-207ENST00000599848 FBXW10Q5XX13 1052 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 SLC30A10Q6XR72 485 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 SV2AQ7L0J3 742 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 MICU2Q8IYU8 434 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 THAP11Q96EK4 314 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 DEFB118Q96PH6 123 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 SLITRK2Q9H156 845 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 TIMM13Q9Y5L4 95 aaPredicted RBP20.9■□□□□ 0.94
UPF1-207ENST00000599848 RIC1Q4ADV7 1423 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 NOS3P29474 1203 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 FBXO39Q8N4B4 442 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 PIK3R5Q8WYR1 880 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 STMN3Q9NZ72 180 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 ZMYM5Q9UJ78 669 aa20.9■□□□□ 0.94
UPF1-207ENST00000599848 ATMINO43313 823 aaPredicted RBP20.89■□□□□ 0.94
UPF1-207ENST00000599848 KLRK1P26718 216 aa20.89■□□□□ 0.94
UPF1-207ENST00000599848 RAD23BP54727 409 aa20.89■□□□□ 0.94
UPF1-207ENST00000599848 KYNUQ16719 465 aa20.89■□□□□ 0.94
UPF1-207ENST00000599848 DAB2IPQ5VWQ8 1189 aa20.89■□□□□ 0.94
UPF1-207ENST00000599848 CCDC185Q8N715 623 aa20.89■□□□□ 0.94
UPF1-207ENST00000599848 FAM126AQ9BYI3 521 aaPredicted RBP20.89■□□□□ 0.94
UPF1-207ENST00000599848 CEP44Q9C0F1 390 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms