RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 FAM183BPQ6ZVS7 135 aa13.32□□□□□ -0.28
SH2D3A-208ENST00000599563 BEND5Q7L4P6 421 aa13.32□□□□□ -0.28
SH2D3A-208ENST00000599563 KBTBD6Q86V97 674 aa13.32□□□□□ -0.28
SH2D3A-208ENST00000599563 TMTC1Q8IUR5 882 aa13.32□□□□□ -0.28
SH2D3A-208ENST00000599563 DENND1CQ8IV53 801 aa13.32□□□□□ -0.28
SH2D3A-208ENST00000599563 UNC45BQ8IWX7 931 aa13.32□□□□□ -0.28
SH2D3A-208ENST00000599563 ZNF557Q8N988 423 aaPredicted RBP13.32□□□□□ -0.28
SH2D3A-208ENST00000599563 EDEM1Q92611 657 aa13.32□□□□□ -0.28
SH2D3A-208ENST00000599563 PPP1R13BQ96KQ4 1090 aa13.32□□□□□ -0.28
SH2D3A-208ENST00000599563 CCDC42Q96M95 316 aa13.32□□□□□ -0.28
SH2D3A-208ENST00000599563 MIS12Q9H081 205 aa13.32□□□□□ -0.28
SH2D3A-208ENST00000599563 DLL3Q9NYJ7 618 aa13.32□□□□□ -0.28
SH2D3A-208ENST00000599563 BCCIPQ9P287 314 aaKnown RBP eCLIP13.32□□□□□ -0.28
SH2D3A-208ENST00000599563 FBXO10Q9UK96 956 aa13.32□□□□□ -0.28
SH2D3A-208ENST00000599563 CEP83Q9Y592 693 aa13.32□□□□□ -0.28
SH2D3A-208ENST00000599563 SDK1Q7Z5N4 2213 aa13.32□□□□□ -0.28
SH2D3A-208ENST00000599563 IRAK2O43187 625 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 RTN2O75298 545 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 NDUFA10O95299 355 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 CHRM1P11229 460 aaPredicted RBP13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 HOXB2P14652 356 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 HNRNPLP14866 589 aaKnown RBP eCLIP13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 MMP8P22894 467 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 GBP1P32455 592 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 DPP6P42658 865 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 SLC11A2P49281 568 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 MESP2Q0VG99 397 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 NNTQ13423 1086 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 MPPE1Q53F39 396 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 SPDYCQ5MJ68 293 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 ADGRF1Q5T601 910 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 FYB2Q5VWT5 728 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 ALKBH5Q6P6C2 394 aaKnown RBP13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 TMEM92Q6UXU6 159 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 PRR23CQ6ZRP0 262 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 TOGARAM2Q6ZUX3 1019 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 VPS36Q86VN1 386 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 ERICH1Q86X53 443 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 XYLT1Q86Y38 959 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 PHF13Q86YI8 300 aaPredicted RBP13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 CHPFQ8IZ52 775 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 MCOLN2Q8IZK6 566 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 C12orf50Q8NA57 414 aaPredicted RBP13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 MDGA1Q8NFP4 955 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 NETO1Q8TDF5 533 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 DDI1Q8WTU0 396 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 AZIN2Q96A70 460 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 RMDN1Q96DB5 314 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 ARHGEF26Q96DR7 871 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 NOX5Q96PH1 765 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 DDX50Q9BQ39 737 aaKnown RBP13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 ISCUQ9H1K1 167 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 DUSP15Q9H1R2 295 aaPredicted RBP13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 PARD6AQ9NPB6 346 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 VPS45Q9NRW7 570 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 POLR3BQ9NW08 1133 aaPredicted RBP13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 STOML2Q9UJZ1 356 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 EPN1Q9Y6I3 576 aaPredicted RBP13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 CEP192Q8TEP8 1941 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 DMXL1Q9Y485 3027 aa13.31□□□□□ -0.28
SH2D3A-208ENST00000599563 TCRBV5S1A1TA0A578 114 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 TCRBV21S2A2A0A5A6 115 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 EIF3CLB5ME19 914 aaKnown RBP13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 GOLGA8SH3BPF8 625 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 TIMM44O43615 452 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 ADAM23O75077 832 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 LCA5LO95447 670 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 FTLP02792 175 aaPredicted RBP13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 CISD3P0C7P0 127 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 ZNF806P0C7X5 589 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 GZMAP12544 262 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 ABCB4P21439 1286 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 CYLC1P35663 651 aaPredicted RBP13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 NSFP46459 744 aaKnown RBP13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 GABRB2P47870 512 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 GALCP54803 685 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 STARD3Q14849 445 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 RSPO4Q2I0M5 234 aaPredicted RBP13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 EMC10Q5UCC4 262 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 OR6B2Q6IFH4 312 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 ANKS1BQ7Z6G8 1248 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 TMEM110Q86TL2 294 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 SFTPA1Q8IWL2 248 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 SCUBE3Q8IX30 993 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 PGBD3Q8N328 593 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 CCDC112Q8NEF3 446 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 IPO4Q8TEX9 1081 aaKnown RBP13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 HMGB4Q8WW32 186 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 ZNF653Q96CK0 615 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 SERPINB11Q96P15 392 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 EIF3CQ99613 913 aaKnown RBP13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 GABRG3Q99928 467 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 RTKNQ9BST9 563 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 TPSD1Q9BZJ3 242 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 ARRDC1-AS1Q9H2J1 176 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 ADAM22Q9P0K1 906 aa13.3□□□□□ -0.28
SH2D3A-208ENST00000599563 TYW5A2RUC4 315 aaKnown RBP13.29□□□□□ -0.28
SH2D3A-208ENST00000599563 RCCD1A6NED2 376 aa13.29□□□□□ -0.28
SH2D3A-208ENST00000599563 MAP3K13O43283 966 aa13.29□□□□□ -0.28
SH2D3A-208ENST00000599563 ZNF217O75362 1048 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms