RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 XPO6Q96QU8 1125 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-217ENST00000598558 ANP32EQ9BTT0 268 aa14.71□□□□□ -0.05
SHKBP1-217ENST00000598558 SPTLC3Q9NUV7 552 aa14.71□□□□□ -0.05
SHKBP1-217ENST00000598558 PARVAQ9NVD7 372 aa14.71□□□□□ -0.05
SHKBP1-217ENST00000598558 KMT2EQ8IZD2 1858 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 TBC1D3BA6NDS4 549 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 CYBBP04839 570 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 APODP05090 189 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 CYP1A2P05177 515 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 TPM1P09493 284 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 HNRNPLP14866 589 aaKnown RBP eCLIP14.7□□□□□ -0.061e-11■■■■□ 20.2
SHKBP1-217ENST00000598558 HLA-FP30511 346 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 CD70P32970 193 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 ADRA1BP35368 520 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 TNFRSF4P43489 277 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 DGKGP49619 791 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 C2orf27AQ580R0 203 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 DCUN1D2Q6PH85 259 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 MAMSTRQ6ZN01 415 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 STRADAQ7RTN6 431 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 KIAA0907Q7Z7F0 614 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 CNGA4Q8IV77 575 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 SYNPOQ8N3V7 929 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 RPLP0P6Q8NHW5 317 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 BTBD6Q96KE9 485 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 ACOX2Q99424 681 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 SPATA6Q9NWH7 488 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 SLC12A6Q9UHW9 1150 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 VANGL2Q9ULK5 521 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 SLC27A6Q9Y2P4 619 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 MYOFQ9NZM1 2061 aa14.7□□□□□ -0.06
SHKBP1-217ENST00000598558 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 CHURC1-FNTBB4DL54 471 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 FAM72CH0Y354 149 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 H0Y858 1186 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 CNTN5O94779 1100 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 TDGF1P13385 188 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 TIE1P35590 1138 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 DMWDQ09019 674 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 ANGPT1Q15389 498 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 C5orf22Q49AR2 442 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 ALFQ53S48 1182 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 C10orf76Q5T2E6 689 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 MPP7Q5T2T1 576 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 FAM72AQ5TYM5 149 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 DAB2IPQ5VWQ8 1189 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 EGFLAMQ63HQ2 1017 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 FAM72DQ6L9T8 149 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 PPP1R2P3Q6NXS1 205 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 VPS36Q86VN1 386 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 FAM72BQ86X60 149 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 CPNE8Q86YQ8 564 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 SPEM1Q8N4L4 309 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 CCDC33Q8N5R6 958 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 IL17RCQ8NAC3 791 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 HJURPQ8NCD3 748 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 OR52K2Q8NGK3 314 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 SORCS1Q8WY21 1168 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 CNPY3Q9BT09 278 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 SLC2A11Q9BYW1 496 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 ABCB8Q9NUT2 735 aa14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 ZNHIT6Q9NWK9 470 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 INTS6Q9UL03 887 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-217ENST00000598558 ZNF318Q5VUA4 2279 aa14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 ANKRD62A6NC57 917 aa14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 DRGXA6NNA5 263 aa14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 K7ESF4 209 aa14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 SGK1O00141 431 aa14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 ADAM23O75077 832 aa14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 MYBL1P10243 752 aa14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 FECHP22830 423 aa14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 MAGEA9P43362 315 aa14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 NUMBP49757 651 aa14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 LMAN2Q12907 356 aa14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 TSR1Q2NL82 804 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 FBXO43Q4G163 708 aa14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 CYP4V2Q6ZWL3 525 aaPredicted RBP14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 SND1Q7KZF4 910 aaKnown RBP eCLIP14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 ADIPOR2Q86V24 386 aa14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 PYROXD2Q8N2H3 581 aa14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 CARNMT1Q8N4J0 409 aa14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 ALLCQ8N6M5 410 aa14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 SPC24Q8NBT2 197 aa14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 FIBINQ8TAL6 211 aa14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 C1orf74Q96LT6 269 aa14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 HAPLN3Q96S86 360 aa14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 PEBP4Q96S96 227 aa14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 DDX50Q9BQ39 737 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 IRX2Q9BZI1 471 aaPredicted RBP14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 STARD13Q9Y3M8 1113 aa14.68□□□□□ -0.06
SHKBP1-217ENST00000598558 WASH3PC4AMC7 463 aa14.67□□□□□ -0.06
SHKBP1-217ENST00000598558 F5H5T6 163 aa14.67□□□□□ -0.06
SHKBP1-217ENST00000598558 AKR1B10O60218 316 aa14.67□□□□□ -0.06
SHKBP1-217ENST00000598558 KLF8O95600 359 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-217ENST00000598558 SP9P0CG40 484 aa14.67□□□□□ -0.06
SHKBP1-217ENST00000598558 TCF4P15884 667 aa14.67□□□□□ -0.06
SHKBP1-217ENST00000598558 PSMA2P25787 234 aa14.67□□□□□ -0.06
SHKBP1-217ENST00000598558 CDC25BP30305 580 aa14.67□□□□□ -0.06
SHKBP1-217ENST00000598558 WASP42768 502 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms