RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 RASSF3Q86WH2 238 aa17.32■□□□□ 0.36
SSBP4-204ENST00000597724 CHSY1Q86X52 802 aa17.32■□□□□ 0.36
SSBP4-204ENST00000597724 CHPFQ8IZ52 775 aa17.32■□□□□ 0.36
SSBP4-204ENST00000597724 LGI2Q8N0V4 545 aa17.32■□□□□ 0.36
SSBP4-204ENST00000597724 CFAP52Q8N1V2 620 aa17.32■□□□□ 0.36
SSBP4-204ENST00000597724 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.32■□□□□ 0.362e-7■■■□□ 16.4
SSBP4-204ENST00000597724 ZNF557Q8N988 423 aaPredicted RBP17.32■□□□□ 0.36
SSBP4-204ENST00000597724 FIBINQ8TAL6 211 aa17.32■□□□□ 0.36
SSBP4-204ENST00000597724 WFDC5Q8TCV5 224 aa17.32■□□□□ 0.36
SSBP4-204ENST00000597724 HAUS4Q9H6D7 363 aa17.32■□□□□ 0.36
SSBP4-204ENST00000597724 WDCPQ9H6R7 721 aa17.32■□□□□ 0.36
SSBP4-204ENST00000597724 POLMQ9NP87 494 aaPredicted RBP17.32■□□□□ 0.36
SSBP4-204ENST00000597724 ABCB8Q9NUT2 735 aa17.32■□□□□ 0.36
SSBP4-204ENST00000597724 GGA2Q9UJY4 613 aa17.32■□□□□ 0.36
SSBP4-204ENST00000597724 EP300Q09472 2414 aaPredicted RBP17.32■□□□□ 0.36
SSBP4-204ENST00000597724 TYW5A2RUC4 315 aaKnown RBP17.31■□□□□ 0.36
SSBP4-204ENST00000597724 TIMM44O43615 452 aa17.31■□□□□ 0.36
SSBP4-204ENST00000597724 ENDOD1O94919 500 aa17.31■□□□□ 0.36
SSBP4-204ENST00000597724 HOXB2P14652 356 aa17.31■□□□□ 0.36
SSBP4-204ENST00000597724 C1QBPQ07021 282 aaKnown RBP17.31■□□□□ 0.36
SSBP4-204ENST00000597724 BRMS1LQ5PSV4 323 aa17.31■□□□□ 0.36
SSBP4-204ENST00000597724 ACAD10Q6JQN1 1059 aa17.31■□□□□ 0.36
SSBP4-204ENST00000597724 SND1Q7KZF4 910 aaKnown RBP eCLIP17.31■□□□□ 0.36
SSBP4-204ENST00000597724 MFN1Q8IWA4 741 aa17.31■□□□□ 0.36
SSBP4-204ENST00000597724 EMC1Q8N766 993 aa17.31■□□□□ 0.36
SSBP4-204ENST00000597724 WFIKKN2Q8TEU8 576 aa17.31■□□□□ 0.36
SSBP4-204ENST00000597724 UCMAQ8WVF2 138 aa17.31■□□□□ 0.36
SSBP4-204ENST00000597724 LMLNQ96KR4 655 aa17.31■□□□□ 0.36
SSBP4-204ENST00000597724 CFAP57Q96MR6 1250 aa17.31■□□□□ 0.36
SSBP4-204ENST00000597724 GABRG3Q99928 467 aa17.31■□□□□ 0.36
SSBP4-204ENST00000597724 CIPCQ9C0C6 399 aa17.31■□□□□ 0.36
SSBP4-204ENST00000597724 XPO4Q9C0E2 1151 aaKnown RBP17.31■□□□□ 0.36
SSBP4-204ENST00000597724 ARHGEF38Q9NXL2 777 aa17.31■□□□□ 0.36
SSBP4-204ENST00000597724 CACNA2D2Q9NY47 1150 aa17.31■□□□□ 0.36
SSBP4-204ENST00000597724 THAP10Q9P2Z0 257 aaPredicted RBP17.31■□□□□ 0.36
SSBP4-204ENST00000597724 PAXBP1Q9Y5B6 917 aa17.31■□□□□ 0.36
SSBP4-204ENST00000597724 FAM186AA6NE01 2351 aa17.31■□□□□ 0.36
SSBP4-204ENST00000597724 EML5Q05BV3 1969 aa17.31■□□□□ 0.36
SSBP4-204ENST00000597724 OTOGLQ3ZCN5 2332 aa17.31■□□□□ 0.36
SSBP4-204ENST00000597724 CFAP54Q96N23 3096 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 PTPRZ1P23471 2315 aaPredicted RBP17.3■□□□□ 0.36
SSBP4-204ENST00000597724 A0A1W2PQF6 199 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 WASH3PC4AMC7 463 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 F5H5T6 163 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 NPC1O15118 1278 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 PAGE1O75459 146 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 ALDH1A2O94788 518 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 ADCY5O95622 1261 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 PABPC1P11940 636 aaKnown RBP17.3■□□□□ 0.36
SSBP4-204ENST00000597724 KRT3P12035 628 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 PDGFRAP16234 1089 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 CD70P32970 193 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 ENPP2Q13822 863 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 SIM2Q14190 667 aaPredicted RBP17.3■□□□□ 0.36
SSBP4-204ENST00000597724 E2F5Q15329 346 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 ANO7Q6IWH7 933 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 FBXL22Q6P050 247 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 CHST9Q7L1S5 443 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 ZNF571Q7Z3V5 609 aaPredicted RBP17.3■□□□□ 0.36
SSBP4-204ENST00000597724 ADIPOR2Q86V24 386 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 AHI1Q8N157 1196 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 CARNMT1Q8N4J0 409 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 C3orf20Q8ND61 904 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 MDGA1Q8NFP4 955 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 JOSD2Q8TAC2 188 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 GAB3Q8WWW8 586 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 RXFP2Q8WXD0 754 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 IQCDQ96DY2 449 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 TKTL2Q9H0I9 626 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 CD248Q9HCU0 757 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 ANLNQ9NQW6 1124 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 CAPN11Q9UMQ6 739 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 SMG5Q9UPR3 1016 aaKnown RBP17.3■□□□□ 0.36
SSBP4-204ENST00000597724 HS3ST4Q9Y661 456 aa17.3■□□□□ 0.36
SSBP4-204ENST00000597724 TCRBV5S1A1TA0A578 114 aa17.29■□□□□ 0.36
SSBP4-204ENST00000597724 C2CD4BA6NLJ0 364 aa17.29■□□□□ 0.36
SSBP4-204ENST00000597724 SIGLEC16A6NMB1 481 aa17.29■□□□□ 0.36
SSBP4-204ENST00000597724 I6L893 689 aaPredicted RBP17.29■□□□□ 0.36
SSBP4-204ENST00000597724 RPP40O75818 363 aaKnown RBP17.29■□□□□ 0.36
SSBP4-204ENST00000597724 LUC7L3O95232 432 aaKnown RBP17.29■□□□□ 0.36
SSBP4-204ENST00000597724 GJB6O95452 261 aa17.29■□□□□ 0.36
SSBP4-204ENST00000597724 TPM3P06753 285 aa17.29■□□□□ 0.36
SSBP4-204ENST00000597724 SKILP12757 684 aa17.29■□□□□ 0.36
SSBP4-204ENST00000597724 RFC1P35251 1148 aaPredicted RBP17.29■□□□□ 0.36
SSBP4-204ENST00000597724 ATXN1P54253 815 aaKnown RBP17.29■□□□□ 0.36
SSBP4-204ENST00000597724 ATP11AP98196 1134 aa17.29■□□□□ 0.36
SSBP4-204ENST00000597724 KLHL30Q0D2K2 578 aa17.29■□□□□ 0.36
SSBP4-204ENST00000597724 AUHQ13825 339 aaKnown RBP17.29■□□□□ 0.36
SSBP4-204ENST00000597724 ZNF234Q14588 700 aa17.29■□□□□ 0.36
SSBP4-204ENST00000597724 CCDC14Q49A88 953 aa17.29■□□□□ 0.36
SSBP4-204ENST00000597724 FSCBQ5H9T9 825 aa17.29■□□□□ 0.36
SSBP4-204ENST00000597724 RABGAP1LQ5R372 815 aa17.29■□□□□ 0.36
SSBP4-204ENST00000597724 PPP1R2P3Q6NXS1 205 aa17.29■□□□□ 0.36
SSBP4-204ENST00000597724 MCOLN2Q8IZK6 566 aa17.29■□□□□ 0.36
SSBP4-204ENST00000597724 RNF214Q8ND24 703 aa17.29■□□□□ 0.36
SSBP4-204ENST00000597724 SORCS1Q8WY21 1168 aa17.29■□□□□ 0.36
SSBP4-204ENST00000597724 SYN2Q92777 582 aaPredicted RBP17.29■□□□□ 0.36
SSBP4-204ENST00000597724 VCPIP1Q96JH7 1222 aa17.29■□□□□ 0.36
SSBP4-204ENST00000597724 TPSD1Q9BZJ3 242 aa17.29■□□□□ 0.36
SSBP4-204ENST00000597724 SIK2Q9H0K1 926 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms