RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 ARFGAP1Q8N6T3 406 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 CENPIQ92674 756 aaPredicted RBP15.53■□□□□ 0.08
TRIM28-207ENST00000597136 C16orf45Q96MC5 204 aaPredicted RBP15.53■□□□□ 0.08
TRIM28-207ENST00000597136 C8orf33Q9H7E9 229 aaPredicted RBP15.53■□□□□ 0.08
TRIM28-207ENST00000597136 RRN3Q9NYV6 651 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 STAP1Q9ULZ2 295 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 ZNF510Q9Y2H8 683 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 HYOU1Q9Y4L1 999 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 FAM170BA6NMN3 283 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 KCNU1A8MYU2 1149 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 ACSL4O60488 711 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 FTCDO95954 541 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 ADH5P11766 374 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 COMTP21964 271 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 TARSP26639 723 aaKnown RBP15.53■□□□□ 0.08
TRIM28-207ENST00000597136 GBP1P32455 592 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 SLC1A1P43005 524 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 SGSHP51688 502 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 ETF1P62495 437 aaKnown RBP15.53■□□□□ 0.08
TRIM28-207ENST00000597136 NNTQ13423 1086 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 CDO1Q16878 200 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 FAM133BQ5BKY9 247 aaKnown RBP15.53■□□□□ 0.08
TRIM28-207ENST00000597136 ADGRF1Q5T601 910 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 NUGGCQ68CJ6 796 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 ZNF852Q6ZMS4 543 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 SFTPA1Q8IWL2 248 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 UNC45BQ8IWX7 931 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 FAM217AQ8IXS0 508 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 FAM172AQ8WUF8 416 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 RNF34Q969K3 372 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 SHDQ96IW2 340 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 WDR24Q96S15 920 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 LRFN3Q9BTN0 628 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 LTB4R2Q9NPC1 389 aa15.53■□□□□ 0.08
TRIM28-207ENST00000597136 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.53■□□□□ 0.08
TRIM28-207ENST00000597136 NEDD8-MDP1E9PL57 170 aa15.52■□□□□ 0.07
TRIM28-207ENST00000597136 GFRA2O00451 464 aa15.52■□□□□ 0.07
TRIM28-207ENST00000597136 RNF8O76064 485 aa15.52■□□□□ 0.07
TRIM28-207ENST00000597136 ENDOD1O94919 500 aa15.52■□□□□ 0.07
TRIM28-207ENST00000597136 DCNP07585 359 aaKnown RBP15.52■□□□□ 0.07
TRIM28-207ENST00000597136 CXCR3P49682 368 aa15.52■□□□□ 0.07
TRIM28-207ENST00000597136 DEUP1Q05D60 604 aa15.52■□□□□ 0.07
TRIM28-207ENST00000597136 TMEM31Q5JXX7 168 aa15.52■□□□□ 0.07
TRIM28-207ENST00000597136 DAB2IPQ5VWQ8 1189 aa15.52■□□□□ 0.07
TRIM28-207ENST00000597136 NT5DC3Q86UY8 548 aa15.52■□□□□ 0.07
TRIM28-207ENST00000597136 FBXL6Q8N531 539 aa15.52■□□□□ 0.07
TRIM28-207ENST00000597136 EZH1Q92800 747 aaPredicted RBP15.52■□□□□ 0.07
TRIM28-207ENST00000597136 PGAP3Q96FM1 320 aaPredicted RBP15.52■□□□□ 0.07
TRIM28-207ENST00000597136 BBS2Q9BXC9 721 aa15.52■□□□□ 0.07
TRIM28-207ENST00000597136 MAGEB5Q9BZ81 275 aa15.52■□□□□ 0.07
TRIM28-207ENST00000597136 RBM12Q9NTZ6 932 aaKnown RBP15.52■□□□□ 0.07
TRIM28-207ENST00000597136 STOML2Q9UJZ1 356 aa15.52■□□□□ 0.07
TRIM28-207ENST00000597136 CLEC4EQ9ULY5 219 aa15.52■□□□□ 0.07
TRIM28-207ENST00000597136 SHROOM3Q8TF72 1996 aa15.52■□□□□ 0.07
TRIM28-207ENST00000597136 MAN2B1O00754 1011 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 SPOPO43791 374 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 LRCH4O75427 683 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 ADH1CP00326 375 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 TYRP14679 529 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 DESP17661 470 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 PCK1P35558 622 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 CHKAP35790 457 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 GGCXP38435 758 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 HDAC4P56524 1084 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 GAD2Q05329 585 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 FYB2Q5VWT5 728 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 FSTL4Q6MZW2 842 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 STRADAQ7RTN6 431 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 PEX26Q7Z412 305 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 CPXM2Q8N436 756 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 TMEM105Q8N8V8 129 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 PJA1Q8NG27 643 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 AZIN2Q96A70 460 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 C1QTNF1Q9BXJ1 281 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 AMFRQ9UKV5 643 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 SIT1Q9Y3P8 196 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 JRKLQ9Y4A0 524 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 SNX10Q9Y5X0 201 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 CACNA1HO95180 2353 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 WDR87Q6ZQQ6 2873 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 FANCMQ8IYD8 2048 aa15.51■□□□□ 0.07
TRIM28-207ENST00000597136 SDK1Q7Z5N4 2213 aa15.5■□□□□ 0.07
TRIM28-207ENST00000597136 PRR33A8MZF0 331 aa15.5■□□□□ 0.07
TRIM28-207ENST00000597136 HOXC11O43248 304 aaPredicted RBP15.5■□□□□ 0.07
TRIM28-207ENST00000597136 APOEP02649 317 aa15.5■□□□□ 0.07
TRIM28-207ENST00000597136 TCF4P15884 667 aa15.5■□□□□ 0.07
TRIM28-207ENST00000597136 CCR1P32246 355 aa15.5■□□□□ 0.07
TRIM28-207ENST00000597136 SLC11A2P49281 568 aa15.5■□□□□ 0.07
TRIM28-207ENST00000597136 PPP2R5DQ14738 602 aa15.5■□□□□ 0.07
TRIM28-207ENST00000597136 TMEM196Q5HYL7 178 aa15.5■□□□□ 0.07
TRIM28-207ENST00000597136 MEI1Q5TIA1 1274 aa15.5■□□□□ 0.07
TRIM28-207ENST00000597136 PIK3R6Q5UE93 754 aa15.5■□□□□ 0.07
TRIM28-207ENST00000597136 RAP1GAP2Q684P5 730 aa15.5■□□□□ 0.07
TRIM28-207ENST00000597136 ASTLQ6HA08 431 aaPredicted RBP15.5■□□□□ 0.07
TRIM28-207ENST00000597136 FAM131BQ86XD5 332 aa15.5■□□□□ 0.07
TRIM28-207ENST00000597136 ETFBKMTQ8IXQ9 262 aa15.5■□□□□ 0.07
TRIM28-207ENST00000597136 CCDC105Q8IYK2 499 aa15.5■□□□□ 0.07
TRIM28-207ENST00000597136 CD101Q93033 1021 aa15.5■□□□□ 0.07
TRIM28-207ENST00000597136 BTN2A3PQ96KV6 586 aa15.5■□□□□ 0.07
TRIM28-207ENST00000597136 P2RY13Q9BPV8 354 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms