RNA–Protein interactions for RNA: ENST00000596899.1

ZNF43-208, Transcript of zinc finger protein 43, human

TSL 3

Gene ZNF43, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF43-208	ENST00000596899	DENND1C	Q8IV53	801 aa		13.59	□□□□□ -0.23
ZNF43-208	ENST00000596899	SYCP3	Q8IZU3	236 aa		13.59	□□□□□ -0.23
ZNF43-208	ENST00000596899	FUK	Q8N0W3	1084 aa		13.59	□□□□□ -0.23
ZNF43-208	ENST00000596899	GPD1L	Q8N335	351 aa		13.59	□□□□□ -0.23
ZNF43-208	ENST00000596899	ARL14	Q8N4G2	192 aa		13.59	□□□□□ -0.23
ZNF43-208	ENST00000596899	MAPK15	Q8TD08	544 aa		13.59	□□□□□ -0.23
ZNF43-208	ENST00000596899	WFIKKN2	Q8TEU8	576 aa		13.59	□□□□□ -0.23
ZNF43-208	ENST00000596899	RAD54L	Q92698	747 aa		13.59	□□□□□ -0.23
ZNF43-208	ENST00000596899	OMD	Q99983	421 aa		13.59	□□□□□ -0.23
ZNF43-208	ENST00000596899	STRA6	Q9BX79	667 aa		13.59	□□□□□ -0.23
ZNF43-208	ENST00000596899	DCLK3	Q9C098	648 aa		13.59	□□□□□ -0.23
ZNF43-208	ENST00000596899	SLC25A18	Q9H1K4	315 aa		13.59	□□□□□ -0.23
ZNF43-208	ENST00000596899	MRPL44	Q9H9J2	332 aa	Known RBP	13.59	□□□□□ -0.23
ZNF43-208	ENST00000596899	UCKL1	Q9NWZ5	548 aa		13.59	□□□□□ -0.23
ZNF43-208	ENST00000596899	RASAL2	Q9UJF2	1139 aa		13.59	□□□□□ -0.23
ZNF43-208	ENST00000596899	AGO1	Q9UL18	857 aa	Known RBP	13.59	□□□□□ -0.23
ZNF43-208	ENST00000596899	SCML2	Q9UQR0	700 aa		13.59	□□□□□ -0.23
ZNF43-208	ENST00000596899	C10orf142	B7Z368	130 aa		13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	LZTS3	O60299	673 aa	Predicted RBP	13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	MAGEC1	O60732	1142 aa		13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	TNFSF15	O95150	251 aa		13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	CCDC130	P13994	396 aa		13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	DGKA	P23743	735 aa		13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	DUSP3	P51452	185 aa	Predicted RBP	13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	EHHADH	Q08426	723 aa		13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	SFSWAP	Q12872	951 aa	Known RBP	13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	CST6	Q15828	149 aa		13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	TADA2B	Q86TJ2	420 aa		13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	ADIPOR2	Q86V24	386 aa		13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	PTRH1	Q86Y79	214 aa	Known RBP	13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	WDR49	Q8IV35	697 aa		13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	CPXM2	Q8N436	756 aa		13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	JAKMIP2	Q96AA8	810 aa		13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	APOLD1	Q96LR9	279 aa		13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	ABCB8	Q9NUT2	735 aa		13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	TBC1D7	Q9P0N9	293 aa		13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	SUN2	Q9UH99	717 aa		13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	NAGPA	Q9UK23	515 aa		13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	FZD4	Q9ULV1	537 aa		13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	ENTPD2	Q9Y5L3	495 aa		13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	ICE1	Q9Y2F5	2266 aa		13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	ZFC3H1	O60293	1989 aa	Known RBP	13.58	□□□□□ -0.24
ZNF43-208	ENST00000596899	RNASEH1	O60930	286 aa	Known RBP	13.57	□□□□□ -0.24
ZNF43-208	ENST00000596899	GCNT3	O95395	438 aa		13.57	□□□□□ -0.24
ZNF43-208	ENST00000596899	DLD	P09622	509 aa	Known RBP	13.57	□□□□□ -0.24
ZNF43-208	ENST00000596899	TGM2	P21980	687 aa		13.57	□□□□□ -0.24
ZNF43-208	ENST00000596899	HOXD9	P28356	352 aa	Predicted RBP	13.57	□□□□□ -0.24
ZNF43-208	ENST00000596899	ADPRH	P54922	357 aa		13.57	□□□□□ -0.24
ZNF43-208	ENST00000596899	PPP2CB	P62714	309 aa		13.57	□□□□□ -0.24
ZNF43-208	ENST00000596899	PPP2CA	P67775	309 aa		13.57	□□□□□ -0.24
ZNF43-208	ENST00000596899	COG7	P83436	770 aa		13.57	□□□□□ -0.24
ZNF43-208	ENST00000596899	PDE4C	Q08493	712 aa		13.57	□□□□□ -0.24
ZNF43-208	ENST00000596899	SRSF6	Q13247	344 aa	Known RBP	13.57	□□□□□ -0.24
ZNF43-208	ENST00000596899	SURF1	Q15526	300 aa		13.57	□□□□□ -0.24
ZNF43-208	ENST00000596899	SKIDA1	Q1XH10	827 aa		13.57	□□□□□ -0.24
ZNF43-208	ENST00000596899	MBLAC2	Q68D91	279 aa		13.57	□□□□□ -0.24
ZNF43-208	ENST00000596899	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.57	□□□□□ -0.24
ZNF43-208	ENST00000596899	AHI1	Q8N157	1196 aa		13.57	□□□□□ -0.24
ZNF43-208	ENST00000596899	OR14C36	Q8NHC7	312 aa		13.57	□□□□□ -0.24
ZNF43-208	ENST00000596899	RASSF8	Q8NHQ8	419 aa		13.57	□□□□□ -0.24
ZNF43-208	ENST00000596899	IFI44	Q8TCB0	444 aa		13.57	□□□□□ -0.24
ZNF43-208	ENST00000596899	TNIP3	Q96KP6	325 aa		13.57	□□□□□ -0.24
ZNF43-208	ENST00000596899	CSNK1G1	Q9HCP0	422 aa		13.57	□□□□□ -0.24
ZNF43-208	ENST00000596899	GGA2	Q9UJY4	613 aa		13.57	□□□□□ -0.24
ZNF43-208	ENST00000596899	SPTBN1	Q01082	2364 aa	Known RBP	13.56	□□□□□ -0.24
ZNF43-208	ENST00000596899	SLC26A4	O43511	780 aa		13.56	□□□□□ -0.24
ZNF43-208	ENST00000596899	SIN3B	O75182	1162 aa		13.56	□□□□□ -0.24
ZNF43-208	ENST00000596899	ATP5B	P06576	529 aa	Known RBP	13.56	□□□□□ -0.24
ZNF43-208	ENST00000596899	THEGL	P0DJG4	465 aa		13.56	□□□□□ -0.24
ZNF43-208	ENST00000596899	GIMD1	P0DJR0	217 aa		13.56	□□□□□ -0.24
ZNF43-208	ENST00000596899	ALPPL2	P10696	532 aa		13.56	□□□□□ -0.24
ZNF43-208	ENST00000596899	UBA7	P41226	1012 aa		13.56	□□□□□ -0.24
ZNF43-208	ENST00000596899	EFEMP1	Q12805	493 aa		13.56	□□□□□ -0.24
ZNF43-208	ENST00000596899	RABEP1	Q15276	862 aa		13.56	□□□□□ -0.24
ZNF43-208	ENST00000596899	TBR1	Q16650	682 aa		13.56	□□□□□ -0.24
ZNF43-208	ENST00000596899	ACOT1	Q86TX2	421 aa		13.56	□□□□□ -0.24
ZNF43-208	ENST00000596899	IQCH	Q86VS3	1027 aa		13.56	□□□□□ -0.24
ZNF43-208	ENST00000596899	CBWD2	Q8IUF1	395 aa		13.56	□□□□□ -0.24
ZNF43-208	ENST00000596899	MMAA	Q8IVH4	418 aa	Known RBP	13.56	□□□□□ -0.24
ZNF43-208	ENST00000596899	RDH13	Q8NBN7	331 aa		13.56	□□□□□ -0.24
ZNF43-208	ENST00000596899	SLC2A14	Q8TDB8	520 aa		13.56	□□□□□ -0.24
ZNF43-208	ENST00000596899	LARP4B	Q92615	738 aa	Known RBP	13.56	□□□□□ -0.24
ZNF43-208	ENST00000596899	GRAMD1A	Q96CP6	724 aa		13.56	□□□□□ -0.24
ZNF43-208	ENST00000596899	LIN37	Q96GY3	246 aa	Predicted RBP	13.56	□□□□□ -0.24
ZNF43-208	ENST00000596899	SMYD3	Q9H7B4	428 aa		13.56	□□□□□ -0.24
ZNF43-208	ENST00000596899	EVA1B	Q9NVM1	165 aa		13.56	□□□□□ -0.24
ZNF43-208	ENST00000596899	TPX2	Q9ULW0	747 aa	Known RBP	13.56	□□□□□ -0.24
ZNF43-208	ENST00000596899	TBC1D3D	A0A087WVF3	549 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	TBC1D3I	A0A087WXS9	549 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	TBC1D3E	A0A087X179	549 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	TBC1D3K	A0A087X1G2	549 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	LY6G6E	A0A0G2JKS1	128 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	TBC1D3F	A6NER0	549 aa	Predicted RBP	13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	ZNF233	A6NK53	670 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	TBC1D3L	B9A6J9	549 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	LAT	O43561	262 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	CLSTN1	O94985	981 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	TBC1D3H	P0C7X1	549 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	RALA	P11233	206 aa		13.55	□□□□□ -0.24
ZNF43-208	ENST00000596899	PABPC1	P11940	636 aa	Known RBP	13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms