RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 BIRC7Q96CA5 298 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 FBRSQ9HAH7 460 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 SGK2Q9HBY8 427 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 GDPD2Q9HCC8 539 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 TM9SF3Q9HD45 589 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 RMND1Q9NWS8 449 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 KIAA1257Q9ULG3 409 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 BTBD3Q9Y2F9 522 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 ANKRD6Q9Y2G4 727 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 PCDHB4Q9Y5E5 795 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 PCDHGB2Q9Y5G2 931 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 SLCO1B1Q9Y6L6 691 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 WDFY3Q8IZQ1 3526 aa10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 ARID1BQ8NFD5 2236 aaPredicted RBP10.99□□□□□ -0.65
CHMP2A-202ENST00000596708 PKD1L2Q7Z442 2459 aa10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 TYW5A2RUC4 315 aaKnown RBP10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 FAM47DPA6NHR8 397 aa10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 O00370 1275 aa10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 SLC16A3O15427 465 aaKnown RBP10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 ACSL4O60488 711 aa10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 CD27P26842 260 aa10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 GRIA4P48058 902 aa10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 SLC11A2P49281 568 aa10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 TBX4P57082 545 aa10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 ZBTB16Q05516 673 aa10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 ZNF658Q5TYW1 1059 aaPredicted RBP10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 NUGGCQ68CJ6 796 aa10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 ZNF776Q68DI1 518 aaPredicted RBP10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 LCLAT1Q6UWP7 414 aa10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 TMPRSS7Q7RTY8 843 aa10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 KIAA0907Q7Z7F0 614 aaPredicted RBP10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 MFN1Q8IWA4 741 aa10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 CCDC117Q8IWD4 279 aaPredicted RBP10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 ZC3H3Q8IXZ2 948 aaKnown RBP10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 SCML4Q8N228 414 aa10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 ZNF557Q8N988 423 aaPredicted RBP10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 ENGASEQ8NFI3 743 aa10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 BAHD1Q8TBE0 780 aaPredicted RBP10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 WFDC5Q8TCV5 224 aa10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 NT5C1BQ96P26 610 aa10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 MTG2Q9H4K7 406 aa10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 ARMCX3Q9UH62 379 aaPredicted RBP10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 GPSM3Q9Y4H4 160 aa10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 APC2O95996 2303 aa10.98□□□□□ -0.65
CHMP2A-202ENST00000596708 ATRXP46100 2492 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 BAHCC1Q9P281 2608 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 TRIM49BA6NDI0 452 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 H0Y8X5 98 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 M0QYV0 167 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 IRAK2O43187 625 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 RNASEH1O60930 286 aaKnown RBP10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 LTFP02788 710 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 PAEPP09466 180 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 SLC6A4P31645 630 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 CCT8P50990 548 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 PMS1P54277 932 aaKnown RBP10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 C21orf59P57076 290 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 IL9RQ01113 521 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 SFSWAPQ12872 951 aaKnown RBP10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 CNGA2Q16280 664 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 COL28A1Q2UY09 1125 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 PKDCCQ504Y2 493 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 MPP7Q5T2T1 576 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 KIAA0895LQ68EN5 471 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 PMF1Q6P1K2 205 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 MSANTD2Q6P1R3 559 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 LAYNQ6UX15 382 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 MARCH9Q86YJ5 346 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 PPM1KQ8N3J5 372 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 GALNT15Q8N3T1 639 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 CARNMT1Q8N4J0 409 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 UBR7Q8N806 425 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 CLEC4CQ8WTT0 213 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 SLC35F5Q8WV83 523 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 HNRNPLLQ8WVV9 542 aaKnown RBP10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 IRGQQ8WZA9 623 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 TFAP2BQ92481 460 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 IGSF8Q969P0 613 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 DDX50Q9BQ39 737 aaKnown RBP10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 IRX2Q9BZI1 471 aaPredicted RBP10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 MIS12Q9H081 205 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 OSGEPQ9NPF4 335 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 TOR4AQ9NXH8 423 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 FBXL12Q9NXK8 326 aa10.97□□□□□ -0.65
CHMP2A-202ENST00000596708 GOLGA6L4A6NEF3 574 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 RNF225M0QZC1 329 aaPredicted RBP10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 TNFSF14O43557 240 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 SIN3BO75182 1162 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 SMC2O95347 1197 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 IGLV3-27P01718 113 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 ASLP04424 464 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 BRD2P25440 801 aaKnown RBP10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 CSKP41240 450 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 GRK6P43250 576 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 FMO5P49326 533 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 LRRC63Q05C16 580 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 CYP4F3Q08477 520 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 CETN1Q12798 172 aa10.96□□□□□ -0.65
CHMP2A-202ENST00000596708 ACAP1Q15027 740 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms