RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 NUMA1Q14980 2115 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 SHBQ15464 509 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 TTC31Q49AM3 519 aaPredicted RBP10.38□□□□□ -0.75
LIG1-209ENST00000596104 PKDCCQ504Y2 493 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 CCDC157Q569K6 752 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 FAM133BQ5BKY9 247 aaKnown RBP10.38□□□□□ -0.75
LIG1-209ENST00000596104 MPP7Q5T2T1 576 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 PIK3R6Q5UE93 754 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 ZNF776Q68DI1 518 aaPredicted RBP10.38□□□□□ -0.75
LIG1-209ENST00000596104 KIAA0895LQ68EN5 471 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 MSANTD2Q6P1R3 559 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 USP30Q70CQ3 517 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 TMPRSS12Q86WS5 348 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 SCML4Q8N228 414 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 RNF139Q8WU17 664 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 KCTD13Q8WZ19 329 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 GOLGA1Q92805 767 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 SNX21Q969T3 373 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 EEF2KMTQ96G04 330 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 SLC6A18Q96N87 628 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 IRX2Q9BZI1 471 aaPredicted RBP10.38□□□□□ -0.75
LIG1-209ENST00000596104 RSPH9Q9H1X1 276 aaPredicted RBP10.38□□□□□ -0.75
LIG1-209ENST00000596104 PABPC3Q9H361 631 aaKnown RBP10.38□□□□□ -0.75
LIG1-209ENST00000596104 EBF2Q9HAK2 575 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 FTSJ1Q9UET6 329 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 SERGEFQ9UGK8 458 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 PCDHGA1Q9Y5H4 931 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 MUC22E2RYF6 1773 aaPredicted RBP10.38□□□□□ -0.75
LIG1-209ENST00000596104 ASXL3Q9C0F0 2248 aa10.38□□□□□ -0.75
LIG1-209ENST00000596104 FAM237AA0A1B0GTK4 181 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 GOLGA6L7A0A1B0GV03 622 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 A0A1W2PPC4 97 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 O00370 1275 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 DFNA5O60443 496 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 WNT1P04628 370 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 POLR2EP19388 210 aaKnown RBP10.37□□□□□ -0.75
LIG1-209ENST00000596104 SLC6A4P31645 630 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 GALCP54803 685 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 DAOAP59103 153 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 EDRF1Q3B7T1 1238 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 INAVAQ3KP66 663 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 CBWD6Q4V339 395 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 CBWD3Q5JTY5 395 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 CBWD5Q5RIA9 395 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 PRAMEF14Q5SWL7 426 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 RFWD3Q6PCD5 774 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 ADAT2Q7Z6V5 191 aaKnown RBP10.37□□□□□ -0.75
LIG1-209ENST00000596104 GATAD2AQ86YP4 633 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 UBR7Q8N806 425 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 ENGASEQ8NFI3 743 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 UBA3Q8TBC4 463 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 TTC17Q96AE7 1141 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 MRGPRX3Q96LB0 322 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 PRICKLE1Q96MT3 831 aaPredicted RBP10.37□□□□□ -0.75
LIG1-209ENST00000596104 IPO9Q96P70 1041 aaKnown RBP10.37□□□□□ -0.75
LIG1-209ENST00000596104 ELF4Q99607 663 aaPredicted RBP10.37□□□□□ -0.75
LIG1-209ENST00000596104 ACE2Q9BYF1 805 aaPredicted RBP10.37□□□□□ -0.75
LIG1-209ENST00000596104 CNGB3Q9NQW8 809 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 ABCC13Q9NSE7 274 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 FBXL12Q9NXK8 326 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 SUN2Q9UH99 717 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 INTS6Q9UL03 887 aaKnown RBP10.37□□□□□ -0.75
LIG1-209ENST00000596104 SCML1Q9UN30 329 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 COQ4Q9Y3A0 265 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 PTPRBP23467 1997 aa10.37□□□□□ -0.75
LIG1-209ENST00000596104 GCN1Q92616 2671 aaKnown RBP10.36□□□□□ -0.75
LIG1-209ENST00000596104 A0A1W2PR77 199 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 CBX4O00257 560 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 PLK4O00444 970 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 ENC1O14682 589 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 IRAK2O43187 625 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 ACSL4O60488 711 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 TBL1XO60907 577 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 SIN3BO75182 1162 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 SETSIPP0DME0 302 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 SYKP43405 635 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 NDUFA8P51970 172 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 CLDN6P56747 220 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 C21orf59P57076 290 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 CUL2Q13617 745 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 KCNJ12Q14500 433 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 ARID5BQ14865 1188 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 CST6Q15828 149 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 HNRNPA1L2Q32P51 320 aaKnown RBP10.36□□□□□ -0.75
LIG1-209ENST00000596104 SGO2Q562F6 1265 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 NADSYN1Q6IA69 706 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 NCEH1Q6PIU2 408 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 SIX6OS1Q8N1H7 587 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 FIBINQ8TAL6 211 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 SAP25Q8TEE9 199 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 CCDC47Q96A33 483 aaKnown RBP10.36□□□□□ -0.75
LIG1-209ENST00000596104 MYEOVQ96EZ4 313 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 NEUROG2Q9H2A3 272 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 HESX1Q9UBX0 185 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 ADAMTS1Q9UHI8 967 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 NCKAP1Q9Y2A7 1128 aa10.36□□□□□ -0.75
LIG1-209ENST00000596104 A0A1W2PP55 124 aa10.35□□□□□ -0.75
LIG1-209ENST00000596104 FAM47DPA6NHR8 397 aa10.35□□□□□ -0.75
LIG1-209ENST00000596104 WNT9AO14904 365 aa10.35□□□□□ -0.75
LIG1-209ENST00000596104 MID1O15344 667 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms