RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 C1orf74Q96LT6 269 aa19.98■□□□□ 0.79
PNKP-207ENST00000596014 PRICKLE1Q96MT3 831 aaPredicted RBP19.98■□□□□ 0.79
PNKP-207ENST00000596014 IP6K2Q9UHH9 426 aa19.98■□□□□ 0.79
PNKP-207ENST00000596014 ATG2BQ96BY7 2078 aa19.98■□□□□ 0.79
PNKP-207ENST00000596014 KIAA1549LQ6ZVL6 1849 aa19.98■□□□□ 0.79
PNKP-207ENST00000596014 F5H5T6 163 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 MYO1FO00160 1098 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 GPR37L1O60883 481 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 RNF8O76064 485 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 IPO7O95373 1038 aaKnown RBP19.97■□□□□ 0.79
PNKP-207ENST00000596014 HOXD9P28356 352 aaPredicted RBP19.97■□□□□ 0.79
PNKP-207ENST00000596014 GGCXP38435 758 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 RPS24P62847 133 aaKnown RBP19.97■□□□□ 0.79
PNKP-207ENST00000596014 ACAP1Q15027 740 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 MPP7Q5T2T1 576 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 CFAP52Q8N1V2 620 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 CCDC185Q8N715 623 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 PJA1Q8NG27 643 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 SLC35G2Q8TBE7 412 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 NTAN1Q96AB6 310 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 PNKPQ96T60 521 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 C1QTNF1Q9BXJ1 281 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 OSGEPQ9NPF4 335 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 LUC7LQ9NQ29 371 aaKnown RBP19.97■□□□□ 0.79
PNKP-207ENST00000596014 DEC1Q9P2X7 70 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 FBXO10Q9UK96 956 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 SIT1Q9Y3P8 196 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 SNX10Q9Y5X0 201 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.97■□□□□ 0.79
PNKP-207ENST00000596014 TBL1XO60907 577 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 MESP2Q0VG99 397 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 PIGHQ14442 188 aaPredicted RBP19.97■□□□□ 0.79
PNKP-207ENST00000596014 ACBD5Q5T8D3 534 aaPredicted RBP19.97■□□□□ 0.79
PNKP-207ENST00000596014 FSTL4Q6MZW2 842 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 FBXL22Q6P050 247 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 C14orf80Q86SX3 495 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 RHOT2Q8IXI1 618 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 HJURPQ8NCD3 748 aaPredicted RBP19.97■□□□□ 0.79
PNKP-207ENST00000596014 OSBPL6Q9BZF3 934 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 DNAJC17Q9NVM6 304 aaKnown RBP19.97■□□□□ 0.79
PNKP-207ENST00000596014 VANGL2Q9ULK5 521 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 CLEC4EQ9ULY5 219 aa19.97■□□□□ 0.79
PNKP-207ENST00000596014 REXO2Q9Y3B8 237 aaKnown RBP19.97■□□□□ 0.79
PNKP-207ENST00000596014 TRIM24O15164 1050 aa19.96■□□□□ 0.79
PNKP-207ENST00000596014 LRCH4O75427 683 aa19.96■□□□□ 0.79
PNKP-207ENST00000596014 DRD1P21728 446 aa19.96■□□□□ 0.79
PNKP-207ENST00000596014 CLCN5P51795 746 aa19.96■□□□□ 0.79
PNKP-207ENST00000596014 GRSF1Q12849 480 aaKnown RBP eCLIP19.96■□□□□ 0.79
PNKP-207ENST00000596014 FZD5Q13467 585 aa19.96■□□□□ 0.79
PNKP-207ENST00000596014 TCEAL1Q15170 157 aa19.96■□□□□ 0.79
PNKP-207ENST00000596014 SLFN11Q7Z7L1 901 aa19.96■□□□□ 0.79
PNKP-207ENST00000596014 PHTF2Q8N3S3 785 aa19.96■□□□□ 0.79
PNKP-207ENST00000596014 FBXL6Q8N531 539 aa19.96■□□□□ 0.79
PNKP-207ENST00000596014 NIPA2Q8N8Q9 360 aa19.96■□□□□ 0.79
PNKP-207ENST00000596014 RFFLQ8WZ73 363 aa19.96■□□□□ 0.79
PNKP-207ENST00000596014 NCAPGQ9BPX3 1015 aa19.96■□□□□ 0.79
PNKP-207ENST00000596014 ARHGEF4Q9NR80 690 aa19.96■□□□□ 0.79
PNKP-207ENST00000596014 STIM2Q9P246 746 aa19.96■□□□□ 0.79
PNKP-207ENST00000596014 TFR2Q9UP52 801 aa19.96■□□□□ 0.79
PNKP-207ENST00000596014 DOCK4Q8N1I0 1966 aa19.96■□□□□ 0.79
PNKP-207ENST00000596014 TYW5A2RUC4 315 aaKnown RBP19.95■□□□□ 0.78
PNKP-207ENST00000596014 PI15O43692 258 aa19.95■□□□□ 0.78
PNKP-207ENST00000596014 CISD3P0C7P0 127 aa19.95■□□□□ 0.78
PNKP-207ENST00000596014 CHRNB1P11230 501 aa19.95■□□□□ 0.78
PNKP-207ENST00000596014 AOC1P19801 751 aa19.95■□□□□ 0.78
PNKP-207ENST00000596014 MIPP30301 263 aa19.95■□□□□ 0.78
PNKP-207ENST00000596014 AIF1P55008 147 aa19.95■□□□□ 0.78
PNKP-207ENST00000596014 SCAPQ12770 1279 aa19.95■□□□□ 0.78
PNKP-207ENST00000596014 CCINQ13939 588 aa19.95■□□□□ 0.78
PNKP-207ENST00000596014 TMEM31Q5JXX7 168 aa19.95■□□□□ 0.78
PNKP-207ENST00000596014 DAB2IPQ5VWQ8 1189 aa19.95■□□□□ 0.78
PNKP-207ENST00000596014 RNF43Q68DV7 783 aa19.95■□□□□ 0.78
PNKP-207ENST00000596014 ASTLQ6HA08 431 aaPredicted RBP19.95■□□□□ 0.78
PNKP-207ENST00000596014 CCDC105Q8IYK2 499 aa19.95■□□□□ 0.78
PNKP-207ENST00000596014 ZNF683Q8IZ20 524 aa19.95■□□□□ 0.78
PNKP-207ENST00000596014 IGSF8Q969P0 613 aa19.95■□□□□ 0.78
PNKP-207ENST00000596014 RPRD1AQ96P16 312 aaPredicted RBP19.95■□□□□ 0.78
PNKP-207ENST00000596014 SLC2A11Q9BYW1 496 aa19.95■□□□□ 0.78
PNKP-207ENST00000596014 MAGEB5Q9BZ81 275 aa19.95■□□□□ 0.78
PNKP-207ENST00000596014 OSBPL2Q9H1P3 480 aa19.95■□□□□ 0.78
PNKP-207ENST00000596014 LMAN1LQ9HAT1 526 aa19.95■□□□□ 0.78
PNKP-207ENST00000596014 PCSK1NQ9UHG2 260 aa19.95■□□□□ 0.78
PNKP-207ENST00000596014 MYO18AQ92614 2054 aaKnown RBP19.95■□□□□ 0.78
PNKP-207ENST00000596014 A0A0A0MRY4 1105 aa19.94■□□□□ 0.78
PNKP-207ENST00000596014 PRR33A8MZF0 331 aa19.94■□□□□ 0.78
PNKP-207ENST00000596014 MTA2O94776 668 aa19.94■□□□□ 0.78
PNKP-207ENST00000596014 KAT7O95251 611 aa19.94■□□□□ 0.78
PNKP-207ENST00000596014 EGFP01133 1207 aa19.94■□□□□ 0.78
PNKP-207ENST00000596014 PCK1P35558 622 aa19.94■□□□□ 0.78
PNKP-207ENST00000596014 DGKGP49619 791 aa19.94■□□□□ 0.78
PNKP-207ENST00000596014 KDSRQ06136 332 aa19.94■□□□□ 0.78
PNKP-207ENST00000596014 C5orf22Q49AR2 442 aa19.94■□□□□ 0.78
PNKP-207ENST00000596014 RABGAP1LQ5R372 815 aa19.94■□□□□ 0.78
PNKP-207ENST00000596014 GRAMD4Q6IC98 578 aa19.94■□□□□ 0.78
PNKP-207ENST00000596014 SUGP1Q8IWZ8 645 aaKnown RBP19.94■□□□□ 0.78
PNKP-207ENST00000596014 ACRBPQ8NEB7 543 aa19.94■□□□□ 0.78
PNKP-207ENST00000596014 CCDC112Q8NEF3 446 aa19.94■□□□□ 0.78
PNKP-207ENST00000596014 EZH1Q92800 747 aaPredicted RBP19.94■□□□□ 0.78
PNKP-207ENST00000596014 CLDN23Q96B33 292 aa19.94■□□□□ 0.78
PNKP-207ENST00000596014 OR12D3Q9UGF7 316 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms