RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 HDAC4P56524 1084 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 NIPAL4Q0D2K0 466 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 CES3Q6UWW8 571 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 SPATA31D4Q6ZUB0 917 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 TMC7Q7Z402 723 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 CMC1Q7Z7K0 106 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 H3BNX3 289 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 NOP56O00567 594 aaKnown RBP17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 ZBTB14O43829 449 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 CLPTM1O96005 669 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 ERVK-10P10266 1014 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 PTPRAP18433 802 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 PMLP29590 882 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 ATXN1P54253 815 aaKnown RBP17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 TLR1Q15399 786 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 LY6KQ17RY6 165 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 ARMC3Q5W041 872 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 OLFML1Q6UWY5 402 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 PQLC1Q8N2U9 271 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 HTR3CQ8WXA8 447 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 DGCR14Q96DF8 476 aaKnown RBP17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 PGBD4Q96DM1 585 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 LRGUKQ96M69 825 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 B3GNT5Q9BYG0 378 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 PEX1O43933 1283 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 TFE3P19532 575 aaPredicted RBP17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 SLC6A3Q01959 620 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 KLF10Q13118 480 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 ZNF781Q8N8C0 355 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 COLGALT1Q8NBJ5 622 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 DCUN1D1Q96GG9 259 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 PPP1R36Q96LQ0 422 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 LENG8Q96PV6 779 aaPredicted RBP17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 OXCT2Q9BYC2 517 aaPredicted RBP17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 CEP41Q9BYV8 373 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 FZD8Q9H461 694 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 MINDY3Q9H8M7 445 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 FAM49BQ9NUQ9 324 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 ATXN10Q9UBB4 475 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 G3BP2Q9UN86 482 aaKnown RBP17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 SSX2IPQ9Y2D8 614 aa17.85■□□□□ 0.45
ARHGEF1-213ENST00000595897 ZNF195O14628 629 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 CASQ2O14958 399 aaPredicted RBP17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 ADCY6O43306 1168 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 PEX10O60683 326 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 PGAM1P18669 254 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 ATICP31939 592 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 RGS2P41220 211 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 GARSP41250 739 aaKnown RBP17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 NR2C2P49116 596 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 HARS2P49590 506 aaKnown RBP17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 SLC9B1Q4ZJI4 515 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 STEAP4Q687X5 459 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 QKIQ96PU8 341 aaKnown RBP eCLIP17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 PPP1R16BQ96T49 567 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 LGMNQ99538 433 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 SEPT10Q9P0V9 454 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 MORF4L1Q9UBU8 362 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 GOLGA8QA0A0J9YX86 632 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 GOLGA8OA6NCC3 632 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 GOLGA8NF8WBI6 632 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 GAS2O43903 313 aaKnown RBP17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 PYGLP06737 847 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 PIM1P11309 404 aaPredicted RBP17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 MLH1P40692 756 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 CLCN3P51790 818 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 INSCQ1MX18 579 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 RARS2Q5T160 578 aaKnown RBP17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 SERPINI1Q99574 410 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 RTKNQ9BST9 563 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 HOXC10Q9NYD6 342 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 DTLQ9NZJ0 730 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 PSMD13Q9UNM6 376 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 AP4E1Q9UPM8 1137 aa17.84■□□□□ 0.45
ARHGEF1-213ENST00000595897 DPYSL4O14531 572 aa17.83■□□□□ 0.45
ARHGEF1-213ENST00000595897 PFKMP08237 780 aa17.83■□□□□ 0.45
ARHGEF1-213ENST00000595897 ATP6V1B1P15313 513 aa17.83■□□□□ 0.45
ARHGEF1-213ENST00000595897 ALOX15P16050 662 aaPredicted RBP17.83■□□□□ 0.45
ARHGEF1-213ENST00000595897 ACAT1P24752 427 aaKnown RBP17.83■□□□□ 0.45
ARHGEF1-213ENST00000595897 RPL5P46777 297 aaKnown RBP17.83■□□□□ 0.45
ARHGEF1-213ENST00000595897 PPP1R26Q5T8A7 1209 aaPredicted RBP17.83■□□□□ 0.45
ARHGEF1-213ENST00000595897 OGFRL1Q5TC84 451 aaPredicted RBP17.83■□□□□ 0.45
ARHGEF1-213ENST00000595897 PRAMEF18Q5VWM3 479 aa17.83■□□□□ 0.45
ARHGEF1-213ENST00000595897 METTL7BQ6UX53 244 aa17.83■□□□□ 0.45
ARHGEF1-213ENST00000595897 RBM44Q6ZP01 1051 aaKnown RBP17.83■□□□□ 0.45
ARHGEF1-213ENST00000595897 CATSPERGQ6ZRH7 1159 aa17.83■□□□□ 0.45
ARHGEF1-213ENST00000595897 NETO2Q8NC67 525 aa17.83■□□□□ 0.45
ARHGEF1-213ENST00000595897 C6orf203Q9P0P8 240 aaPredicted RBP17.83■□□□□ 0.45
ARHGEF1-213ENST00000595897 TNFSF13BQ9Y275 285 aa17.83■□□□□ 0.45
ARHGEF1-213ENST00000595897 RPS6KL1Q9Y6S9 549 aa17.83■□□□□ 0.45
ARHGEF1-213ENST00000595897 A0A0A0MRY4 1105 aa17.83■□□□□ 0.44
ARHGEF1-213ENST00000595897 PRKCGP05129 697 aa17.83■□□□□ 0.44
ARHGEF1-213ENST00000595897 MRPS22P82650 360 aaKnown RBP17.83■□□□□ 0.44
ARHGEF1-213ENST00000595897 SREK1Q8WXA9 508 aaKnown RBP17.83■□□□□ 0.44
ARHGEF1-213ENST00000595897 CNBD2Q96M20 576 aa17.83■□□□□ 0.44
ARHGEF1-213ENST00000595897 SPATA13Q96N96 652 aa17.83■□□□□ 0.44
ARHGEF1-213ENST00000595897 CSPG4P5Q96PW8 444 aa17.83■□□□□ 0.44
ARHGEF1-213ENST00000595897 CDH19Q9H159 772 aa17.83■□□□□ 0.44
ARHGEF1-213ENST00000595897 VPS33BQ9H267 617 aa17.83■□□□□ 0.44
ARHGEF1-213ENST00000595897 SNX15Q9NRS6 342 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms